Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_F16
(889 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_1127 + 9294079-9294193,9294300-9294369,9294611-9294716,929... 81 1e-15
02_05_0610 - 30342105-30342266,30343024-30343129,30343788-303438... 81 2e-15
03_02_0321 + 7443835-7443837,7443957-7444077,7444168-7444271,744... 58 1e-08
10_01_0125 + 1509642-1509759,1509847-1509950,1510693-1510824,151... 56 3e-08
09_04_0677 - 19388888-19389019,19389124-19389216,19389317-193894... 44 2e-04
01_07_0018 - 40488702-40488833,40488928-40489020,40489125-404892... 43 3e-04
08_02_0211 - 14333553-14333684,14333795-14333887,14334019-143341... 33 0.30
05_03_0115 - 8544590-8544958,8545408-8545503,8561954-8562505,857... 33 0.30
09_04_0144 + 15071723-15071993,15072078-15072632,15072671-150726... 30 2.1
01_07_0067 - 40857544-40858164,40858265-40858370,40858541-408586... 29 6.5
03_05_0379 + 23628200-23628366,23629074-23629133,23630177-236302... 28 8.6
03_02_0275 + 7042433-7042732,7042864-7043140,7043751-7044231,704... 28 8.6
>06_01_1127 +
9294079-9294193,9294300-9294369,9294611-9294716,
9295665-9295805,9296377-9296475
Length = 176
Score = 81.0 bits (191), Expect = 1e-15
Identities = 42/115 (36%), Positives = 65/115 (56%)
Frame = +3
Query: 231 IAKPMAXXXXXXXXXXXXXXSSNHKNYIRNGLKIVQKQLRLGEKGMVFFAGDISPIEIMC 410
IAKP+A +S K ++ G+K V K +R G+KG+ AG+ISPI+++
Sbjct: 19 IAKPLAGKKLCKRTLKLVRRASEAK-CLKRGVKEVVKSIRRGQKGLCIIAGNISPIDVIT 77
Query: 411 HLPAVCEEKDVQYCYTPSRKDIGAAMGTMRGCIMVLVKEHEDYKDLYEEVKSEIK 575
H+P +CEE ++ Y Y PS++D+ A T R VLV +L E+VK ++K
Sbjct: 78 HVPILCEEANIPYVYVPSKEDLATAGTTKRPTCCVLVLTKPAKGELEEDVKEKLK 132
>02_05_0610 -
30342105-30342266,30343024-30343129,30343788-30343857,
30343978-30344092
Length = 150
Score = 80.6 bits (190), Expect = 2e-15
Identities = 42/115 (36%), Positives = 64/115 (55%)
Frame = +3
Query: 231 IAKPMAXXXXXXXXXXXXXXSSNHKNYIRNGLKIVQKQLRLGEKGMVFFAGDISPIEIMC 410
IAKP+A +S K ++ G+K V K +R G KG+ AG+ISPI+++
Sbjct: 19 IAKPLAGKKLCKRTLKLVRRASEAK-CLKRGVKEVVKSIRRGNKGLCVIAGNISPIDVIT 77
Query: 411 HLPAVCEEKDVQYCYTPSRKDIGAAMGTMRGCIMVLVKEHEDYKDLYEEVKSEIK 575
H+P +CEE ++ Y Y PS++D+ A T R VLV ++ EEVK ++K
Sbjct: 78 HVPILCEEANIPYIYVPSKEDLATAGTTKRPTCCVLVMTKPAKGEINEEVKEKLK 132
>03_02_0321 +
7443835-7443837,7443957-7444077,7444168-7444271,
7445056-7445187,7445285-7445311
Length = 128
Score = 57.6 bits (133), Expect = 1e-08
Identities = 32/100 (32%), Positives = 47/100 (47%)
Frame = +3
Query: 234 AKPMAXXXXXXXXXXXXXXSSNHKNYIRNGLKIVQKQLRLGEKGMVFFAGDISPIEIMCH 413
A P+A +SN+K ++ G K L G V A D P+EI+ H
Sbjct: 10 AYPLADAQLTMTILDLVQQASNYKQ-LKKGANEATKTLNRGISEFVVMAADTEPLEILLH 68
Query: 414 LPAVCEEKDVQYCYTPSRKDIGAAMGTMRGCIMVLVKEHE 533
LP + E+K+V Y + PS++ +G A G R I V +E
Sbjct: 69 LPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNE 108
>10_01_0125 +
1509642-1509759,1509847-1509950,1510693-1510824,
1510936-1510962
Length = 126
Score = 56.4 bits (130), Expect = 3e-08
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 2/118 (1%)
Frame = +3
Query: 234 AKPMAXXXXXXXXXXXXXXSSNHKNYIRNGLKIVQKQLRLGEKGMVFFAGDISPIEIMCH 413
A P+A ++N+K ++ G K L G V A D P+EI+ H
Sbjct: 8 AYPLADSQLAQAIQELVSQAANYKQ-LKKGANEATKTLNRGIAEFVVMAADAEPLEILLH 66
Query: 414 LPAVCEEKDVQYCYTPSRKDIGAAMGTMRGCIMVLVKEHE--DYKDLYEEVKSEIKLL 581
LP + E+K+V Y + PS++ +G A G R I V +E + +D +K I+ L
Sbjct: 67 LPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASNLRDPINNLKVAIEKL 124
>09_04_0677 -
19388888-19389019,19389124-19389216,19389317-19389445,
19389559-19389728,19390280-19390481,19390576-19390623,
19390797-19390799
Length = 258
Score = 44.0 bits (99), Expect = 2e-04
Identities = 21/88 (23%), Positives = 42/88 (47%)
Frame = +3
Query: 312 IRNGLKIVQKQLRLGEKGMVFFAGDISPIEIMCHLPAVCEEKDVQYCYTPSRKDIGAAMG 491
++ GL V + + +V A D+ PIE++ LPA+C + +V YC + +G+ +
Sbjct: 128 VKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKARLGSIVH 187
Query: 492 TMRGCIMVLVKEHEDYKDLYEEVKSEIK 575
++ L + K + ++ IK
Sbjct: 188 KKTASVLCLTTVKNEDKLEFSKILEAIK 215
>01_07_0018 -
40488702-40488833,40488928-40489020,40489125-40489253,
40489379-40489500,40490292-40490544,40490636-40490638
Length = 243
Score = 43.2 bits (97), Expect = 3e-04
Identities = 22/89 (24%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Frame = +3
Query: 312 IRNGLKIVQKQLRLGEKGMVFFAGDISPIEIMCHLPAVCEEKDVQYCYTPSRKDIGAAMG 491
++ GL V + + +V A D+ PIE++ LPA+C + ++ YC + +G+ +
Sbjct: 113 VKYGLDHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGSIVH 172
Query: 492 TMRGCIMVL--VKEHE--DYKDLYEEVKS 566
++ L VK + ++ + E +KS
Sbjct: 173 KKTASVLCLTTVKNEDKLEFSKILEAIKS 201
>08_02_0211 -
14333553-14333684,14333795-14333887,14334019-14334105,
14334220-14334389,14334985-14335186,14335604-14335606
Length = 228
Score = 33.1 bits (72), Expect = 0.30
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +3
Query: 312 IRNGLKIVQKQLRLGEKGMVFFAGDISPIEIMCHLPAVCEEKDVQYCYTPS 464
++ GL V + + +V A D+ PIE++ LPA+C + ++ + T S
Sbjct: 112 VKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEIVHKKTAS 162
>05_03_0115 -
8544590-8544958,8545408-8545503,8561954-8562505,
8576247-8576312,8576623-8576694,8576967-8577082,
8577743-8577838,8578498-8578765
Length = 544
Score = 33.1 bits (72), Expect = 0.30
Identities = 16/39 (41%), Positives = 26/39 (66%)
Frame = +3
Query: 471 DIGAAMGTMRGCIMVLVKEHEDYKDLYEEVKSEIKLLGH 587
++G+A+G +R LVKE+ D K E++KS+I+ L H
Sbjct: 113 ELGSAVGRLRDKEEHLVKEYRDLKLEIEQIKSDIQSLRH 151
>09_04_0144 +
15071723-15071993,15072078-15072632,15072671-15072681,
15072954-15073012,15073962-15074040
Length = 324
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -3
Query: 311 IVLMVTRFLNKFIYLFGEFFCGHRFRYY 228
IVL+VT L + Y+F EF C F YY
Sbjct: 280 IVLLVTLMLANWQYMFKEFTCKQYFCYY 307
>01_07_0067 -
40857544-40858164,40858265-40858370,40858541-40858659,
40859195-40859392,40859659-40859724,40859798-40859916,
40860295-40860580
Length = 504
Score = 28.7 bits (61), Expect = 6.5
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -1
Query: 166 WSSCSTGSCFTLPIISDFY 110
W+ C++ CFT PI+S F+
Sbjct: 188 WTLCASDRCFTNPILSTFF 206
>03_05_0379 +
23628200-23628366,23629074-23629133,23630177-23630209,
23630253-23630665,23631522-23632008,23632623-23633334
Length = 623
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -1
Query: 223 QCSTFSSWLCGSALMLTSAWSSCSTGSC 140
+C WLCG+A L W+S SC
Sbjct: 381 KCGQCLCWLCGAATGLAHNWTSIDGHSC 408
>03_02_0275 +
7042433-7042732,7042864-7043140,7043751-7044231,
7044943-7045491,7045556-7045680,7045824-7045966
Length = 624
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 220 CSTFSSWLCGSALMLTSAWSSCSTGSC 140
C WLCG A WSS S SC
Sbjct: 348 CGQAFCWLCGGATGRDHTWSSISGHSC 374
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,677,811
Number of Sequences: 37544
Number of extensions: 381257
Number of successful extensions: 775
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 775
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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