Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_F12
         (903 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6RGJ8 Cluster: Predicted protein; n=1; Ajellomyces cap...    36   1.1  
UniRef50_Q3VXY1 Cluster: Putative uncharacterized protein; n=1; ...    36   1.4  
UniRef50_Q0S917 Cluster: Possible proline rich protein; n=1; Rho...    36   1.4  
UniRef50_Q4SRQ5 Cluster: Chromosome undetermined SCAF14504, whol...    33   7.5  

>UniRef50_A6RGJ8 Cluster: Predicted protein; n=1; Ajellomyces
           capsulatus NAm1|Rep: Predicted protein - Ajellomyces
           capsulatus NAm1
          Length = 757

 Score = 36.3 bits (80), Expect = 1.1
 Identities = 19/60 (31%), Positives = 21/60 (35%)
 Frame = +1

Query: 241 GXPPXGGGXXPPTKGXXXGXGXXXXKXXGXKXPPXXKXGXXXPPEGPXKXAQXXGXXPGG 420
           G PP GGG  PP  G   G G    +  G       + G      GP       G  PGG
Sbjct: 403 GGPPGGGGGGPPGSGGGGGGGGGPPEGGGGSDGAPGRGGGGGGGGGPPGGGGGGGGPPGG 462


>UniRef50_Q3VXY1 Cluster: Putative uncharacterized protein; n=1;
           Frankia sp. EAN1pec|Rep: Putative uncharacterized
           protein - Frankia sp. EAN1pec
          Length = 629

 Score = 35.9 bits (79), Expect = 1.4
 Identities = 23/68 (33%), Positives = 25/68 (36%)
 Frame = -2

Query: 419 PPGXXPXXWAXFXGPSGGXXXPXXLXGGXFXPSXXLXXXPXPXXXPXVGGXXPPPXGGXP 240
           PP   P   A   GP GG   P    GG + P       P P   P  GG  P P GG  
Sbjct: 84  PPAADPGR-AYGSGPGGGPYPPAGPAGGQYSPPP-----PGPGARPPAGGGAPYPPGGPG 137

Query: 239 XSVFCXPP 216
            +    PP
Sbjct: 138 PATGPYPP 145


>UniRef50_Q0S917 Cluster: Possible proline rich protein; n=1;
           Rhodococcus sp. RHA1|Rep: Possible proline rich protein
           - Rhodococcus sp. (strain RHA1)
          Length = 338

 Score = 35.9 bits (79), Expect = 1.4
 Identities = 22/70 (31%), Positives = 25/70 (35%), Gaps = 2/70 (2%)
 Frame = -2

Query: 419 PPGXXPXX--WAXFXGPSGGXXXPXXLXGGXFXPSXXLXXXPXPXXXPXVGGXXPPPXGG 246
           PPG  P       +  P GG   P    GG + P       P P   P   G  PPP  G
Sbjct: 48  PPGGYPPPPPGGNYPPPPGGNYPPPS--GGNYPPPSGGNYPPPPGNYPPPQGNYPPPPQG 105

Query: 245 XPXSVFCXPP 216
            P   +  PP
Sbjct: 106 PPPGGYPPPP 115


>UniRef50_Q4SRQ5 Cluster: Chromosome undetermined SCAF14504, whole
           genome shotgun sequence; n=2; Euteleostomi|Rep:
           Chromosome undetermined SCAF14504, whole genome shotgun
           sequence - Tetraodon nigroviridis (Green puffer)
          Length = 772

 Score = 33.5 bits (73), Expect = 7.5
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = -1

Query: 630 GPPGXGGTHXXPLGGP*NPXXPRFPP 553
           GPPG  G    P+GGP  P  P  PP
Sbjct: 499 GPPGPPGPQGPPIGGPPGPPGPHGPP 524


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 377,783,053
Number of Sequences: 1657284
Number of extensions: 3978965
Number of successful extensions: 5359
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5114
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81981722200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)