Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_F10
(913 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 38 0.008
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 38 0.008
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 38 0.010
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 38 0.010
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 38 0.010
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 38 0.010
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 38 0.010
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 38 0.010
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 35 0.093
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 35 0.093
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 32 0.49
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 32 0.49
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 32 0.65
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 31 1.1
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 31 1.1
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 31 1.1
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 1.1
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 27 1.9
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 30 2.0
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 30 2.6
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 29 3.5
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 3.5
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 29 3.5
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 6.1
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 6.1
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 6.1
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 6.1
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 28 8.1
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 28 8.1
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 28 8.1
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 28 8.1
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 28 8.1
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 28 8.1
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 38.3 bits (85), Expect = 0.008
Identities = 24/67 (35%), Positives = 26/67 (38%), Gaps = 5/67 (7%)
Frame = -2
Query: 729 PPEXXGXPXXPP-----XGGXXPXPPPKTXGXGFFXGXXGXXPXXKXPXPXGGGGFXXXX 565
PP G P PP GG P PPP+ G G P + P P G G
Sbjct: 327 PPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAG--PGMYPPPPPSRPPAPPSGHGM---- 380
Query: 564 XPPXPPP 544
PP PPP
Sbjct: 381 IPPPPPP 387
Score = 33.5 bits (73), Expect = 0.21
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = -2
Query: 708 PXXPPXGGXXPXPPPKTXGXGFFXGXXGXXPXXKXPXPXGGGGFXXXXXPPXPPP 544
P PP G P PPP G G G P P G PP PPP
Sbjct: 287 PPPPPSSGMWPPPPPPPPGRT--PGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP 339
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/66 (30%), Positives = 21/66 (31%)
Frame = -2
Query: 735 GXPPEXXGXPXXPPXGGXXPXPPPKTXGXGFFXGXXGXXPXXKXPXPXGGGGFXXXXXPP 556
G PP PP G P PPP G + G P P G G P
Sbjct: 315 GMPPPPPPSRFGPPGMGGMPPPPP--PGMRY---PGGMPPPPPPRYPSAGPGMYPPPPPS 369
Query: 555 XPPPXP 538
PP P
Sbjct: 370 RPPAPP 375
Score = 29.1 bits (62), Expect = 4.6
Identities = 19/55 (34%), Positives = 21/55 (38%)
Frame = -2
Query: 708 PXXPPXGGXXPXPPPKTXGXGFFXGXXGXXPXXKXPXPXGGGGFXXXXXPPXPPP 544
P PP G P PPP G + P + P P G G PP PPP
Sbjct: 275 PPMPPTPGMTPRPPP-PPSSGMWP-PPPPPPPGRTPGPPGMPGM-----PPPPPP 322
Score = 29.1 bits (62), Expect = 4.6
Identities = 19/64 (29%), Positives = 20/64 (31%)
Frame = -2
Query: 729 PPEXXGXPXXPPXGGXXPXPPPKTXGXGFFXGXXGXXPXXKXPXPXGGGGFXXXXXPPXP 550
PP P P G P PPP G G P P G + PP P
Sbjct: 301 PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGG--------MPPPPPPGMRYPGGMPPPPP 352
Query: 549 PPXP 538
P P
Sbjct: 353 PRYP 356
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 38.3 bits (85), Expect = 0.008
Identities = 24/67 (35%), Positives = 26/67 (38%), Gaps = 5/67 (7%)
Frame = -2
Query: 729 PPEXXGXPXXPP-----XGGXXPXPPPKTXGXGFFXGXXGXXPXXKXPXPXGGGGFXXXX 565
PP G P PP GG P PPP+ G G P + P P G G
Sbjct: 337 PPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAG--PGMYPPPPPSRPPAPPSGHGM---- 390
Query: 564 XPPXPPP 544
PP PPP
Sbjct: 391 IPPPPPP 397
Score = 33.5 bits (73), Expect = 0.21
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = -2
Query: 708 PXXPPXGGXXPXPPPKTXGXGFFXGXXGXXPXXKXPXPXGGGGFXXXXXPPXPPP 544
P PP G P PPP G G G P P G PP PPP
Sbjct: 297 PPPPPSSGMWPPPPPPPPGRT--PGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP 349
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/66 (30%), Positives = 21/66 (31%)
Frame = -2
Query: 735 GXPPEXXGXPXXPPXGGXXPXPPPKTXGXGFFXGXXGXXPXXKXPXPXGGGGFXXXXXPP 556
G PP PP G P PPP G + G P P G G P
Sbjct: 325 GMPPPPPPSRFGPPGMGGMPPPPP--PGMRY---PGGMPPPPPPRYPSAGPGMYPPPPPS 379
Query: 555 XPPPXP 538
PP P
Sbjct: 380 RPPAPP 385
Score = 29.1 bits (62), Expect = 4.6
Identities = 19/55 (34%), Positives = 21/55 (38%)
Frame = -2
Query: 708 PXXPPXGGXXPXPPPKTXGXGFFXGXXGXXPXXKXPXPXGGGGFXXXXXPPXPPP 544
P PP G P PPP G + P + P P G G PP PPP
Sbjct: 285 PPMPPTPGMTPRPPP-PPSSGMWP-PPPPPPPGRTPGPPGMPGM-----PPPPPP 332
Score = 29.1 bits (62), Expect = 4.6
Identities = 19/64 (29%), Positives = 20/64 (31%)
Frame = -2
Query: 729 PPEXXGXPXXPPXGGXXPXPPPKTXGXGFFXGXXGXXPXXKXPXPXGGGGFXXXXXPPXP 550
PP P P G P PPP G G P P G + PP P
Sbjct: 311 PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGG--------MPPPPPPGMRYPGGMPPPPP 362
Query: 549 PPXP 538
P P
Sbjct: 363 PRYP 366
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 37.9 bits (84), Expect = 0.010
Identities = 26/69 (37%), Positives = 26/69 (37%), Gaps = 3/69 (4%)
Frame = -2
Query: 735 GXPPEXXGXPXXPPXGGXXP---XPPPKTXGXGFFXGXXGXXPXXKXPXPXGGGGFXXXX 565
G PP G P PP GG P PPP G G P P P GG
Sbjct: 718 GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP---PPPPPGG------C 768
Query: 564 XPPXPPPXP 538
PP PPP P
Sbjct: 769 PPPPPPPPP 777
Score = 34.7 bits (76), Expect = 0.093
Identities = 25/80 (31%), Positives = 25/80 (31%)
Frame = -2
Query: 735 GXPPEXXGXPXXPPXGGXXPXPPPKTXGXGFFXGXXGXXPXXKXPXPXGGGGFXXXXXPP 556
G PP G P PP G P PPP GF G P P G P
Sbjct: 750 GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG----------PPPPPPPGMFAPMAPV 799
Query: 555 XPPPXPXKKKKXXXGXXXXF 496
P P KK G F
Sbjct: 800 IPDYLPPKKVPKVDGPMRKF 819
Score = 33.1 bits (72), Expect = 0.28
Identities = 24/66 (36%), Positives = 24/66 (36%)
Frame = -2
Query: 735 GXPPEXXGXPXXPPXGGXXPXPPPKTXGXGFFXGXXGXXPXXKXPXPXGGGGFXXXXXPP 556
G PP P PP G P PPP G G P P P GG PP
Sbjct: 711 GGPPPP---PGLPPITGGPPPPPP----PGGLPPITGGPP----PPPPPGGLPPISGGPP 759
Query: 555 XPPPXP 538
PPP P
Sbjct: 760 PPPPPP 765
Score = 32.7 bits (71), Expect = 0.37
Identities = 26/83 (31%), Positives = 26/83 (31%)
Frame = +3
Query: 582 PPPPGXXGFXFXXXXXXPPXKTPXPXFWGGGXXFXPXKGGXXXXPXIRGXXPXKNFXPXG 761
PPPPG PP P GG P GG P I G P P G
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPIT---GGPPPPPPPGGL---PPISGGPPPPPPPPGG 767
Query: 762 PPKGXXPXKRPXXXGFXPKXPPP 830
P P G P PPP
Sbjct: 768 CPPPPPPPPPGGFKGGPPPPPPP 790
Score = 31.5 bits (68), Expect = 0.86
Identities = 21/63 (33%), Positives = 21/63 (33%)
Frame = -2
Query: 735 GXPPEXXGXPXXPPXGGXXPXPPPKTXGXGFFXGXXGXXPXXKXPXPXGGGGFXXXXXPP 556
G PP PP G P PPP G P P P GGF PP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPP---------PGGCPPPPPPPPP---GGFKGGPPPP 787
Query: 555 XPP 547
PP
Sbjct: 788 PPP 790
Score = 29.5 bits (63), Expect = 3.5
Identities = 30/108 (27%), Positives = 31/108 (28%), Gaps = 2/108 (1%)
Frame = +2
Query: 581 PPPPXGXGXXFXGXXPXXPXKNPXPXVLXXXXXXXXXXXXXXGXPXNSGGXPXKKFXSKX 760
PPPP G G P P P L G P SGG P
Sbjct: 713 PPPPPGLPPITGGPPPP-----PPPGGLPPITGGPPPPPPPGGLPPISGGPP----PPPP 763
Query: 761 APKGXKXXKKAPFXGFFXKXPPPPXXXPKKXP--PYXXGGXPPXGIKK 898
P G P G F PPPP P P PP + K
Sbjct: 764 PPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVPK 811
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/48 (35%), Positives = 17/48 (35%), Gaps = 3/48 (6%)
Frame = +3
Query: 696 GGXXXXPXIRGXXPXKNFXPX---GPPKGXXPXKRPXXXGFXPKXPPP 830
GG P I G P P GPP P P G P PPP
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPP 748
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 37.9 bits (84), Expect = 0.010
Identities = 26/69 (37%), Positives = 26/69 (37%), Gaps = 3/69 (4%)
Frame = -2
Query: 735 GXPPEXXGXPXXPPXGGXXP---XPPPKTXGXGFFXGXXGXXPXXKXPXPXGGGGFXXXX 565
G PP G P PP GG P PPP G G P P P GG
Sbjct: 718 GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP---PPPPPGG------C 768
Query: 564 XPPXPPPXP 538
PP PPP P
Sbjct: 769 PPPPPPPPP 777
Score = 34.7 bits (76), Expect = 0.093
Identities = 25/80 (31%), Positives = 25/80 (31%)
Frame = -2
Query: 735 GXPPEXXGXPXXPPXGGXXPXPPPKTXGXGFFXGXXGXXPXXKXPXPXGGGGFXXXXXPP 556
G PP G P PP G P PPP GF G P P G P
Sbjct: 750 GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG----------PPPPPPPGMFAPMAPV 799
Query: 555 XPPPXPXKKKKXXXGXXXXF 496
P P KK G F
Sbjct: 800 IPDYLPPKKVPKVDGPMRKF 819
Score = 33.1 bits (72), Expect = 0.28
Identities = 24/66 (36%), Positives = 24/66 (36%)
Frame = -2
Query: 735 GXPPEXXGXPXXPPXGGXXPXPPPKTXGXGFFXGXXGXXPXXKXPXPXGGGGFXXXXXPP 556
G PP P PP G P PPP G G P P P GG PP
Sbjct: 711 GGPPPP---PGLPPITGGPPPPPP----PGGLPPITGGPP----PPPPPGGLPPISGGPP 759
Query: 555 XPPPXP 538
PPP P
Sbjct: 760 PPPPPP 765
Score = 32.7 bits (71), Expect = 0.37
Identities = 26/83 (31%), Positives = 26/83 (31%)
Frame = +3
Query: 582 PPPPGXXGFXFXXXXXXPPXKTPXPXFWGGGXXFXPXKGGXXXXPXIRGXXPXKNFXPXG 761
PPPPG PP P GG P GG P I G P P G
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPIT---GGPPPPPPPGGL---PPISGGPPPPPPPPGG 767
Query: 762 PPKGXXPXKRPXXXGFXPKXPPP 830
P P G P PPP
Sbjct: 768 CPPPPPPPPPGGFKGGPPPPPPP 790
Score = 31.5 bits (68), Expect = 0.86
Identities = 21/63 (33%), Positives = 21/63 (33%)
Frame = -2
Query: 735 GXPPEXXGXPXXPPXGGXXPXPPPKTXGXGFFXGXXGXXPXXKXPXPXGGGGFXXXXXPP 556
G PP PP G P PPP G P P P GGF PP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPP---------PGGCPPPPPPPPP---GGFKGGPPPP 787
Query: 555 XPP 547
PP
Sbjct: 788 PPP 790
Score = 29.5 bits (63), Expect = 3.5
Identities = 30/108 (27%), Positives = 31/108 (28%), Gaps = 2/108 (1%)
Frame = +2
Query: 581 PPPPXGXGXXFXGXXPXXPXKNPXPXVLXXXXXXXXXXXXXXGXPXNSGGXPXKKFXSKX 760
PPPP G G P P P L G P SGG P
Sbjct: 713 PPPPPGLPPITGGPPPP-----PPPGGLPPITGGPPPPPPPGGLPPISGGPP----PPPP 763
Query: 761 APKGXKXXKKAPFXGFFXKXPPPPXXXPKKXP--PYXXGGXPPXGIKK 898
P G P G F PPPP P P PP + K
Sbjct: 764 PPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVPK 811
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/48 (35%), Positives = 17/48 (35%), Gaps = 3/48 (6%)
Frame = +3
Query: 696 GGXXXXPXIRGXXPXKNFXPX---GPPKGXXPXKRPXXXGFXPKXPPP 830
GG P I G P P GPP P P G P PPP
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPP 748
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 37.9 bits (84), Expect = 0.010
Identities = 26/69 (37%), Positives = 26/69 (37%), Gaps = 3/69 (4%)
Frame = -2
Query: 735 GXPPEXXGXPXXPPXGGXXP---XPPPKTXGXGFFXGXXGXXPXXKXPXPXGGGGFXXXX 565
G PP G P PP GG P PPP G G P P P GG
Sbjct: 301 GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP---PPPPPGG------C 351
Query: 564 XPPXPPPXP 538
PP PPP P
Sbjct: 352 PPPPPPPPP 360
Score = 34.7 bits (76), Expect = 0.093
Identities = 25/80 (31%), Positives = 25/80 (31%)
Frame = -2
Query: 735 GXPPEXXGXPXXPPXGGXXPXPPPKTXGXGFFXGXXGXXPXXKXPXPXGGGGFXXXXXPP 556
G PP G P PP G P PPP GF G P P G P
Sbjct: 333 GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG----------PPPPPPPGMFAPMAPV 382
Query: 555 XPPPXPXKKKKXXXGXXXXF 496
P P KK G F
Sbjct: 383 IPDYLPPKKVPKVDGPMRKF 402
Score = 33.1 bits (72), Expect = 0.28
Identities = 24/66 (36%), Positives = 24/66 (36%)
Frame = -2
Query: 735 GXPPEXXGXPXXPPXGGXXPXPPPKTXGXGFFXGXXGXXPXXKXPXPXGGGGFXXXXXPP 556
G PP P PP G P PPP G G P P P GG PP
Sbjct: 294 GGPPPP---PGLPPITGGPPPPPP----PGGLPPITGGPP----PPPPPGGLPPISGGPP 342
Query: 555 XPPPXP 538
PPP P
Sbjct: 343 PPPPPP 348
Score = 32.7 bits (71), Expect = 0.37
Identities = 26/83 (31%), Positives = 26/83 (31%)
Frame = +3
Query: 582 PPPPGXXGFXFXXXXXXPPXKTPXPXFWGGGXXFXPXKGGXXXXPXIRGXXPXKNFXPXG 761
PPPPG PP P GG P GG P I G P P G
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPIT---GGPPPPPPPGGL---PPISGGPPPPPPPPGG 350
Query: 762 PPKGXXPXKRPXXXGFXPKXPPP 830
P P G P PPP
Sbjct: 351 CPPPPPPPPPGGFKGGPPPPPPP 373
Score = 31.5 bits (68), Expect = 0.86
Identities = 21/63 (33%), Positives = 21/63 (33%)
Frame = -2
Query: 735 GXPPEXXGXPXXPPXGGXXPXPPPKTXGXGFFXGXXGXXPXXKXPXPXGGGGFXXXXXPP 556
G PP PP G P PPP G P P P GGF PP
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPPPP---------PGGCPPPPPPPPP---GGFKGGPPPP 370
Query: 555 XPP 547
PP
Sbjct: 371 PPP 373
Score = 29.5 bits (63), Expect = 3.5
Identities = 30/108 (27%), Positives = 31/108 (28%), Gaps = 2/108 (1%)
Frame = +2
Query: 581 PPPPXGXGXXFXGXXPXXPXKNPXPXVLXXXXXXXXXXXXXXGXPXNSGGXPXKKFXSKX 760
PPPP G G P P P L G P SGG P
Sbjct: 296 PPPPPGLPPITGGPPPP-----PPPGGLPPITGGPPPPPPPGGLPPISGGPP----PPPP 346
Query: 761 APKGXKXXKKAPFXGFFXKXPPPPXXXPKKXP--PYXXGGXPPXGIKK 898
P G P G F PPPP P P PP + K
Sbjct: 347 PPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVPK 394
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/48 (35%), Positives = 17/48 (35%), Gaps = 3/48 (6%)
Frame = +3
Query: 696 GGXXXXPXIRGXXPXKNFXPX---GPPKGXXPXKRPXXXGFXPKXPPP 830
GG P I G P P GPP P P G P PPP
Sbjct: 284 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPP 331
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 37.9 bits (84), Expect = 0.010
Identities = 22/69 (31%), Positives = 26/69 (37%)
Frame = -2
Query: 729 PPEXXGXPXXPPXGGXXPXPPPKTXGXGFFXGXXGXXPXXKXPXPXGGGGFXXXXXPPXP 550
PP G P PP GG PPP+ G P P P GG P
Sbjct: 273 PPPPTGSPPPPPAGG--SPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGS-PPPAGTGSP 329
Query: 549 PPXPXKKKK 523
PP P +K++
Sbjct: 330 PPPPRQKRQ 338
Score = 35.9 bits (79), Expect = 0.040
Identities = 25/85 (29%), Positives = 27/85 (31%), Gaps = 1/85 (1%)
Frame = +3
Query: 633 PPXKTPXPXFWGGGXXFXPXKGGXXXXPXIRGXXPXKNFXPXGPPKGXXPXKRPXXXGFX 812
PP P G G P G P P P PP G P P G
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP--PPRAGSP 297
Query: 813 PKXPPPLXXXXK-NXPLX*XGGAPP 884
P PPP + P GG+PP
Sbjct: 298 PPPPPPRGSPPTGSLPPPQAGGSPP 322
Score = 31.9 bits (69), Expect = 0.65
Identities = 20/70 (28%), Positives = 21/70 (30%), Gaps = 2/70 (2%)
Frame = -2
Query: 735 GXPPEXXGXPXXPPXGGXXPXPPPKTXG--XGFFXGXXGXXPXXKXPXPXGGGGFXXXXX 562
G PP PP G PPP G G P P P GG
Sbjct: 235 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 294
Query: 561 PPXPPPXPXK 532
PPP P +
Sbjct: 295 GSPPPPPPPR 304
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/73 (27%), Positives = 21/73 (28%)
Frame = -2
Query: 729 PPEXXGXPXXPPXGGXXPXPPPKTXGXGFFXGXXGXXPXXKXPXPXGGGGFXXXXXPPXP 550
PP G P P G P PPP P P P GG P
Sbjct: 240 PPPPKGSP--PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 297
Query: 549 PPXPXKKKKXXXG 511
PP P + G
Sbjct: 298 PPPPPPRGSPPTG 310
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 823 PPPXKXPXKXPPLXKXGXPPP 885
PPP P PPL G PPP
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPP 257
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 37.9 bits (84), Expect = 0.010
Identities = 22/69 (31%), Positives = 26/69 (37%)
Frame = -2
Query: 729 PPEXXGXPXXPPXGGXXPXPPPKTXGXGFFXGXXGXXPXXKXPXPXGGGGFXXXXXPPXP 550
PP G P PP GG PPP+ G P P P GG P
Sbjct: 294 PPPPTGSPPPPPAGG--SPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGS-PPPAGTGSP 350
Query: 549 PPXPXKKKK 523
PP P +K++
Sbjct: 351 PPPPRQKRQ 359
Score = 35.9 bits (79), Expect = 0.040
Identities = 25/85 (29%), Positives = 27/85 (31%), Gaps = 1/85 (1%)
Frame = +3
Query: 633 PPXKTPXPXFWGGGXXFXPXKGGXXXXPXIRGXXPXKNFXPXGPPKGXXPXKRPXXXGFX 812
PP P G G P G P P P PP G P P G
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP--PPRAGSP 318
Query: 813 PKXPPPLXXXXK-NXPLX*XGGAPP 884
P PPP + P GG+PP
Sbjct: 319 PPPPPPRGSPPTGSLPPPQAGGSPP 343
Score = 31.9 bits (69), Expect = 0.65
Identities = 20/70 (28%), Positives = 21/70 (30%), Gaps = 2/70 (2%)
Frame = -2
Query: 735 GXPPEXXGXPXXPPXGGXXPXPPPKTXG--XGFFXGXXGXXPXXKXPXPXGGGGFXXXXX 562
G PP PP G PPP G G P P P GG
Sbjct: 256 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 315
Query: 561 PPXPPPXPXK 532
PPP P +
Sbjct: 316 GSPPPPPPPR 325
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/73 (27%), Positives = 21/73 (28%)
Frame = -2
Query: 729 PPEXXGXPXXPPXGGXXPXPPPKTXGXGFFXGXXGXXPXXKXPXPXGGGGFXXXXXPPXP 550
PP G P P G P PPP P P P GG P
Sbjct: 261 PPPPKGSP--PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 318
Query: 549 PPXPXKKKKXXXG 511
PP P + G
Sbjct: 319 PPPPPPRGSPPTG 331
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 823 PPPXKXPXKXPPLXKXGXPPP 885
PPP P PPL G PPP
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPP 278
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 37.9 bits (84), Expect = 0.010
Identities = 22/69 (31%), Positives = 26/69 (37%)
Frame = -2
Query: 729 PPEXXGXPXXPPXGGXXPXPPPKTXGXGFFXGXXGXXPXXKXPXPXGGGGFXXXXXPPXP 550
PP G P PP GG PPP+ G P P P GG P
Sbjct: 279 PPPPTGSPPPPPAGG--SPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGS-PPPAGTGSP 335
Query: 549 PPXPXKKKK 523
PP P +K++
Sbjct: 336 PPPPRQKRQ 344
Score = 35.9 bits (79), Expect = 0.040
Identities = 25/85 (29%), Positives = 27/85 (31%), Gaps = 1/85 (1%)
Frame = +3
Query: 633 PPXKTPXPXFWGGGXXFXPXKGGXXXXPXIRGXXPXKNFXPXGPPKGXXPXKRPXXXGFX 812
PP P G G P G P P P PP G P P G
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP--PPRAGSP 303
Query: 813 PKXPPPLXXXXK-NXPLX*XGGAPP 884
P PPP + P GG+PP
Sbjct: 304 PPPPPPRGSPPTGSLPPPQAGGSPP 328
Score = 31.9 bits (69), Expect = 0.65
Identities = 20/70 (28%), Positives = 21/70 (30%), Gaps = 2/70 (2%)
Frame = -2
Query: 735 GXPPEXXGXPXXPPXGGXXPXPPPKTXG--XGFFXGXXGXXPXXKXPXPXGGGGFXXXXX 562
G PP PP G PPP G G P P P GG
Sbjct: 241 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 300
Query: 561 PPXPPPXPXK 532
PPP P +
Sbjct: 301 GSPPPPPPPR 310
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/73 (27%), Positives = 21/73 (28%)
Frame = -2
Query: 729 PPEXXGXPXXPPXGGXXPXPPPKTXGXGFFXGXXGXXPXXKXPXPXGGGGFXXXXXPPXP 550
PP G P P G P PPP P P P GG P
Sbjct: 246 PPPPKGSP--PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 303
Query: 549 PPXPXKKKKXXXG 511
PP P + G
Sbjct: 304 PPPPPPRGSPPTG 316
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 823 PPPXKXPXKXPPLXKXGXPPP 885
PPP P PPL G PPP
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPP 263
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 34.7 bits (76), Expect = 0.093
Identities = 18/59 (30%), Positives = 18/59 (30%)
Frame = -2
Query: 714 GXPXXPPXGGXXPXPPPKTXGXGFFXGXXGXXPXXKXPXPXGGGGFXXXXXPPXPPPXP 538
G P P P PPP G P P P G PP PPP P
Sbjct: 599 GTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPP 657
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = -2
Query: 729 PPEXXGXPXXPPXGGXXPXPPPKTXGXGFFXGXXGXXPXXKXPXPXGGGG 580
PP+ G P P PPP G G P P P G GG
Sbjct: 616 PPQSFGMA---PISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGG 662
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 34.7 bits (76), Expect = 0.093
Identities = 18/59 (30%), Positives = 18/59 (30%)
Frame = -2
Query: 714 GXPXXPPXGGXXPXPPPKTXGXGFFXGXXGXXPXXKXPXPXGGGGFXXXXXPPXPPPXP 538
G P P P PPP G P P P G PP PPP P
Sbjct: 425 GTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPP 483
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = -2
Query: 729 PPEXXGXPXXPPXGGXXPXPPPKTXGXGFFXGXXGXXPXXKXPXPXGGGG 580
PP+ G P P PPP G G P P P G GG
Sbjct: 442 PPQSFGMA---PISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGG 488
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 32.3 bits (70), Expect = 0.49
Identities = 20/67 (29%), Positives = 21/67 (31%)
Frame = -2
Query: 747 NFXXGXPPEXXGXPXXPPXGGXXPXPPPKTXGXGFFXGXXGXXPXXKXPXPXGGGGFXXX 568
N G PP+ P PP P PP G G G P P G G
Sbjct: 116 NGNPGRPPKEPCEPITPPPCKPCPEGPPGPAGPPGPQGNKGPLGPPGPPGPEGPNGTAGN 175
Query: 567 XXPPXPP 547
P PP
Sbjct: 176 KGPAGPP 182
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 32.3 bits (70), Expect = 0.49
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = -2
Query: 729 PPEXXGXPXXPPXGGXXPXPPPKTXGXGFFXGXXGXXPXXKXPXPXGGGGFXXXXXPPXP 550
PP G P P G PPP G G P P P GG G P
Sbjct: 393 PPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFP 452
Query: 549 P 547
P
Sbjct: 453 P 453
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/53 (35%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
Frame = +3
Query: 531 FXPXRGGXGGXFXXXKXPPPPGXXGFXFXXXXXXPPXKTPXPXFWG--GGXXF 683
+ P +GG GG PPPPG G PP P P G GG F
Sbjct: 423 YGPPQGGPGGF-----GPPPPGGPGAYGPPPTGFPPVGAPPPGAAGAPGGNPF 470
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 31.9 bits (69), Expect = 0.65
Identities = 20/67 (29%), Positives = 21/67 (31%)
Frame = -2
Query: 747 NFXXGXPPEXXGXPXXPPXGGXXPXPPPKTXGXGFFXGXXGXXPXXKXPXPXGGGGFXXX 568
N G PP+ P PP P PP G G G P P G G
Sbjct: 118 NGNPGRPPKEPCEPLTPPPCKPCPEGPPGPAGPPGPDGNKGPLGPPGPPGPEGPNGEPGN 177
Query: 567 XXPPXPP 547
P PP
Sbjct: 178 KGPAGPP 184
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/68 (29%), Positives = 21/68 (30%)
Frame = -2
Query: 735 GXPPEXXGXPXXPPXGGXXPXPPPKTXGXGFFXGXXGXXPXXKXPXPXGGGGFXXXXXPP 556
G PP+ P PP P PP G G G P GG G P
Sbjct: 131 GKPPQSPCEPLTPPPCPACPPGPPGAPGAPGKPGSEGPPGPPGHDGPNGGPGQPGQPGPH 190
Query: 555 XPPPXPXK 532
P P K
Sbjct: 191 GPNGHPGK 198
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/66 (28%), Positives = 20/66 (30%)
Frame = -2
Query: 735 GXPPEXXGXPXXPPXGGXXPXPPPKTXGXGFFXGXXGXXPXXKXPXPXGGGGFXXXXXPP 556
G PP+ P PP P PP G G G P G PP
Sbjct: 130 GRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGDSGEPGSPGLPGQDAAPGEPGPKGPP 189
Query: 555 XPPPXP 538
PP P
Sbjct: 190 GPPGAP 195
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/66 (28%), Positives = 20/66 (30%)
Frame = -2
Query: 735 GXPPEXXGXPXXPPXGGXXPXPPPKTXGXGFFXGXXGXXPXXKXPXPXGGGGFXXXXXPP 556
G PP+ P PP P PP G G G P G PP
Sbjct: 130 GRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGDSGEPGSPGLPGQDAAPGEPGPKGPP 189
Query: 555 XPPPXP 538
PP P
Sbjct: 190 GPPGAP 195
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/68 (27%), Positives = 21/68 (30%)
Frame = -2
Query: 726 PEXXGXPXXPPXGGXXPXPPPKTXGXGFFXGXXGXXPXXKXPXPXGGGGFXXXXXPPXPP 547
P P PP P PPP G P P PP PP
Sbjct: 1338 PPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMIL---PPPPP 1394
Query: 546 PXPXKKKK 523
P P ++KK
Sbjct: 1395 PLPSEEKK 1402
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 26.6 bits (56), Expect(2) = 5.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 539 GXGGGXGGFXXXKXPPPPXGXG 604
G GGG GG PPP G G
Sbjct: 43 GGGGGCGGGCAPPPPPPACGGG 64
Score = 24.6 bits (51), Expect(2) = 1.9
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -2
Query: 591 GGGGFXXXXXPPXPPP 544
GGGG PP PPP
Sbjct: 101 GGGGCGGGCAPPPPPP 116
Score = 24.2 bits (50), Expect(2) = 1.9
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -2
Query: 690 GGXXPXPPPKTXGXGFFXGXXG 625
GG P PPP G G G G
Sbjct: 50 GGCAPPPPPPACGGGCGGGGGG 71
Score = 20.6 bits (41), Expect(2) = 5.5
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +2
Query: 524 FFFFXGXGGGXGG 562
F F G GGG GG
Sbjct: 18 FLFPSGGGGGGGG 30
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +1
Query: 781 PKKGPXXGVFXQXPPPPXKXPXKXPPLXKXGXPPP 885
P P + Q PPPP P PP K PPP
Sbjct: 71 PPPPPLISILQQAPPPP---PPPPPPTLKAPPPPP 102
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.9 bits (64), Expect = 2.6
Identities = 22/72 (30%), Positives = 22/72 (30%)
Frame = -2
Query: 771 PLGAXLXKNFXXGXPPEXXGXPXXPPXGGXXPXPPPKTXGXGFFXGXXGXXPXXKXPXPX 592
P G N PP G P PP G P PP GF K P P
Sbjct: 695 PPGVPPMFNLNAPPPPGIPGYPPAPPPPGVGPPPPQGIPPMGF--------DPNKPPPPM 746
Query: 591 GGGGFXXXXXPP 556
GF PP
Sbjct: 747 FQQGFNAGAPPP 758
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/63 (28%), Positives = 18/63 (28%)
Frame = -2
Query: 735 GXPPEXXGXPXXPPXGGXXPXPPPKTXGXGFFXGXXGXXPXXKXPXPXGGGGFXXXXXPP 556
G PP P PP P PP G G G P G PP
Sbjct: 134 GKPPTAPCEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDATPGLPGPRGPP 193
Query: 555 XPP 547
PP
Sbjct: 194 GPP 196
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +1
Query: 793 PXXGVFXQXPPPPXKXPXKXPPLXKXGXPPP 885
P + Q PPPP P PP PPP
Sbjct: 123 PAPAPYQQQPPPPPPPPHYPPPPPHYPPPPP 153
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/63 (28%), Positives = 18/63 (28%)
Frame = -2
Query: 735 GXPPEXXGXPXXPPXGGXXPXPPPKTXGXGFFXGXXGXXPXXKXPXPXGGGGFXXXXXPP 556
G PP P PP P PP G G G P G PP
Sbjct: 134 GKPPTAPCEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDATPGLPGPRGPP 193
Query: 555 XPP 547
PP
Sbjct: 194 GPP 196
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 28.7 bits (61), Expect = 6.1
Identities = 18/66 (27%), Positives = 19/66 (28%)
Frame = -2
Query: 735 GXPPEXXGXPXXPPXGGXXPXPPPKTXGXGFFXGXXGXXPXXKXPXPXGGGGFXXXXXPP 556
G PP+ P PP P PP G G G P G P
Sbjct: 120 GRPPQQPCEPTTPPPCQPCPQGPPGPPGQPGIPGDNGPPGEQGPKGPDAAPGEPGPKGPI 179
Query: 555 XPPPXP 538
PP P
Sbjct: 180 GPPGPP 185
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/41 (31%), Positives = 14/41 (34%)
Frame = +1
Query: 763 PQRXXXPKKGPXXGVFXQXPPPPXKXPXKXPPLXKXGXPPP 885
P R P P + PPPP P P PPP
Sbjct: 470 PSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPP 510
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 28.7 bits (61), Expect = 6.1
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = -2
Query: 726 PEXXGXPXXPPXGGXXPXPPPKTXGXGFFXGXXGXXPXXKXPXPXGGGGFXXXXXPPXPP 547
P G P P G P PP G G G P P G G PP PP
Sbjct: 214 PLTPGAPGEPGDSG--PPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGVDGQSGPPGPP 271
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 729 PPEXXGXPXXPPXGGXXPXPPP 664
PP G P PP G P PPP
Sbjct: 98 PPMMGGIPPPPPMFGAPPPPPP 119
Score = 28.3 bits (60), Expect = 8.1
Identities = 23/76 (30%), Positives = 24/76 (31%)
Frame = -2
Query: 771 PLGAXLXKNFXXGXPPEXXGXPXXPPXGGXXPXPPPKTXGXGFFXGXXGXXPXXKXPXPX 592
P G + K PP G PP G P PPP F G P P
Sbjct: 53 PPGQSIPKPSFFIPPPVPNGFIPPPPGPGGIPPPPP------MFAGGIPPPPPMMGGIPP 106
Query: 591 GGGGFXXXXXPPXPPP 544
F PP PPP
Sbjct: 107 PPPMF--GAPPPPPPP 120
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/41 (31%), Positives = 14/41 (34%)
Frame = +1
Query: 763 PQRXXXPKKGPXXGVFXQXPPPPXKXPXKXPPLXKXGXPPP 885
P R P P + PPPP P P PPP
Sbjct: 477 PSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPP 517
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = -2
Query: 648 GFFXGXXGXXPXXKXPXPXGGGGFXXXXXPPXPPPXP 538
G++ G P P G GGF PP PPP P
Sbjct: 649 GWYGSGGGSSMPMPVPPPGGLGGF--MPPPPPPPPMP 683
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = -2
Query: 648 GFFXGXXGXXPXXKXPXPXGGGGFXXXXXPPXPPPXP 538
G++ G P P G GGF PP PPP P
Sbjct: 649 GWYGSGGGSSMPMPVPPPGGLGGF--MPPPPPPPPMP 683
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 28.3 bits (60), Expect = 8.1
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = -2
Query: 726 PEXXGXPXXPPXGGXXPXPPPKTXGXGFFXGXXGXXPXXKXPXPXGGGGFXXXXXPPXPP 547
P G P P G P PP G G G P P G G PP PP
Sbjct: 209 PLTPGAPGEPGDSG--PPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGADGQSGPPGPP 266
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 28.3 bits (60), Expect = 8.1
Identities = 19/66 (28%), Positives = 20/66 (30%), Gaps = 4/66 (6%)
Frame = -2
Query: 735 GXPPEXXGXPXXPPXGGXX----PXPPPKTXGXGFFXGXXGXXPXXKXPXPXGGGGFXXX 568
G PP G PP GG P P + G G P P P G
Sbjct: 179 GGPPGPFGPSGAPPSGGPPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPS 238
Query: 567 XXPPXP 550
PP P
Sbjct: 239 GGPPGP 244
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 28.3 bits (60), Expect = 8.1
Identities = 18/66 (27%), Positives = 19/66 (28%)
Frame = -2
Query: 735 GXPPEXXGXPXXPPXGGXXPXPPPKTXGXGFFXGXXGXXPXXKXPXPXGGGGFXXXXXPP 556
G PP+ P PP P PP G G G P G P
Sbjct: 130 GRPPQQPCEPITPPPWKPCPQGPPGPPGPPGPPGDSGEPGSPGLPGQDAAPGEPGPKGPK 189
Query: 555 XPPPXP 538
PP P
Sbjct: 190 GPPGAP 195
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 28.3 bits (60), Expect = 8.1
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = -2
Query: 726 PEXXGXPXXPPXGGXXPXPPPKTXGXGFFXGXXGXXPXXKXPXPXGGGGFXXXXXPPXPP 547
P G P P G P PP G G G P P G G PP PP
Sbjct: 209 PLTPGAPGEPGDSG--PPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGADGQSGPPGPP 266
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 28.3 bits (60), Expect = 8.1
Identities = 19/64 (29%), Positives = 19/64 (29%)
Frame = -2
Query: 729 PPEXXGXPXXPPXGGXXPXPPPKTXGXGFFXGXXGXXPXXKXPXPXGGGGFXXXXXPPXP 550
PP G P P G P T G G P P G G PP P
Sbjct: 221 PPGNDGQPGAPGQDGQPGAPGTNTVNSPGGPGPAG-PPGPPGPPGQDGSGGAAQPGPPGP 279
Query: 549 PPXP 538
P P
Sbjct: 280 PGPP 283
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 527 FFFXGXGGGXGGFXXXKXPPPP 592
F F GGG GG PPPP
Sbjct: 17 FLFPSAGGGGGGCGCGAPPPPP 38
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,210,081
Number of Sequences: 27780
Number of extensions: 238648
Number of successful extensions: 1778
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1203
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -