Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_F08
         (915 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0240 - 2506901-2507008,2507950-2508322,2508418-2508612,250...   147   1e-35
08_02_0456 - 17362080-17364156,17364853-17364942,17372615-173733...    30   2.2  
11_01_0435 + 3337840-3338494,3338950-3339313,3339733-3340009           29   5.2  
06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,805...    29   5.2  
10_02_0089 - 5138048-5138561,5138864-5139105,5139712-5140079,514...    28   9.0  
09_03_0040 + 11816056-11819069,11819837-11820428                       28   9.0  

>10_01_0240 -
           2506901-2507008,2507950-2508322,2508418-2508612,
           2508771-2508885,2510027-2510132,2510253-2510366,
           2510521-2510538
          Length = 342

 Score =  147 bits (356), Expect = 1e-35
 Identities = 78/150 (52%), Positives = 102/150 (68%), Gaps = 2/150 (1%)
 Frame = +2

Query: 158 LESTMICVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLTLA--NVEVL 331
           LE+T+ICVD+S++MRNGD+ PTRLQAQ+DA NLV  +K  SNPEN VG+L +A   V VL
Sbjct: 5   LEATVICVDDSEWMRNGDYPPTRLQAQEDAANLVVGTKMTSNPENTVGVLAMAGDRVRVL 64

Query: 332 ATLTSDVGRIMSKLHRVQPNGDINLLTGIRIAHLALKHRQGKNHKMRIVVFVGSPVNTDE 511
              TSD  + ++ +H ++ +G+ NL   + IA L LK+R  K    RIVVFVGSPV  DE
Sbjct: 65  LAPTSDPVKFLACMHGLEASGEANLTATLNIAELVLKNRPDKRLSQRIVVFVGSPVK-DE 123

Query: 512 KELVKLAKRLKKEKVNCDVVSFGEDSENNP 601
           K L  + K+LKK  V+ DVV FGE  +  P
Sbjct: 124 K-LETIGKKLKKYNVSLDVVEFGESDDEKP 152


>08_02_0456 -
           17362080-17364156,17364853-17364942,17372615-17373318,
           17373421-17373451,17374366-17374448,17374517-17374640,
           17376427-17376560
          Length = 1080

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 20/56 (35%), Positives = 29/56 (51%)
 Frame = -2

Query: 200 SCSHYCPHRS*YFLRPF*YFFSRLIFIKAEYNGRQFNSYK*TKNCCXIIAKX*GXP 33
           SC     HR  Y LRP  +  S+ +F+K  +   +  S+  T+ CC I+AK  G P
Sbjct: 431 SCCFPHVHRV-YKLRPLHFVDSKRLFLKRIFGLEECPSHL-TEVCCNILAKCDGLP 484


>11_01_0435 + 3337840-3338494,3338950-3339313,3339733-3340009
          Length = 431

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
 Frame = +2

Query: 524 KLAKRLK--KEKVNCDVVSFGEDSENNPLLTTFVNTLNGKDTSTGGSHLGVCAGRRLCCA 697
           K  KR +  KE V     S G+++  NP      N L     +T    LG+  G  LCCA
Sbjct: 261 KTIKRFEQHKEAVKEKARSAGDEAGRNPRCVADGNELLRFHCTTFACSLGLAGGTALCCA 320


>06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,
            8057595-8058314,8058404-8058603,8058988-8059172,
            8059287-8059354,8059432-8060246,8060502-8060599,
            8060702-8060887,8061358-8061538,8061651-8061812,
            8061894-8061937,8062059-8062115,8062409-8062505,
            8062614-8062786,8062868-8063081,8063270-8063395,
            8064072-8064188,8064459-8064566,8064729-8064898,
            8065049-8065127,8065211-8065285,8065845-8065942,
            8066030-8066137,8066238-8066295,8066527-8066631,
            8067461-8069516,8069804-8070697,8070896-8071852,
            8072022-8072075,8072157-8072222,8072294-8073472,
            8073868-8075598,8075764-8075829,8076763-8077788,
            8077893-8078041
          Length = 4264

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -3

Query: 706  ASESTTQPPAGTDTKVTSPSRCIFPI*CVDKGG 608
            A  +T  P  GT+ K T+P   I P+ C D  G
Sbjct: 1664 ALSATGNPDVGTEIKGTTPDGTIKPVICTDNKG 1696


>10_02_0089 -
           5138048-5138561,5138864-5139105,5139712-5140079,
           5140862-5140943
          Length = 401

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +1

Query: 574 VWRGFRKQPSFDHLCQHTKWERYIDWGKSPWCLC 675
           VW  F+  P FD    H +   Y D  ++ +CLC
Sbjct: 237 VWENFKNNPMFDISTDHPQ-TYYEDMQRAVFCLC 269


>09_03_0040 + 11816056-11819069,11819837-11820428
          Length = 1201

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 18/58 (31%), Positives = 26/58 (44%)
 Frame = +2

Query: 521 VKLAKRLKKEKVNCDVVSFGEDSENNPLLTTFVNTLNGKDTSTGGSHLGVCAGRRLCC 694
           V   K +K E +     S+ ED  N+    + V   N K+   GG  L VC G++  C
Sbjct: 616 VASCKAIKHEAIEDKEDSYFEDEGNSKASYSDVEG-NSKELVRGGKALVVCGGKKELC 672


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,081,267
Number of Sequences: 37544
Number of extensions: 463803
Number of successful extensions: 1031
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1029
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)