Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_F07
         (914 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069683-1|AAL39828.1|  993|Drosophila melanogaster LD45449p pro...    31   2.2  
AE014298-2035|AAF48374.1|  993|Drosophila melanogaster CG9411-PA...    31   2.2  
AE014298-1168|AAF46366.1|  926|Drosophila melanogaster CG10555-P...    30   5.1  

>AY069683-1|AAL39828.1|  993|Drosophila melanogaster LD45449p
           protein.
          Length = 993

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 22/68 (32%), Positives = 23/68 (33%), Gaps = 2/68 (2%)
 Frame = +3

Query: 366 PPPXXGXFXPXXKXXPPXFKKXFFXPPPXG--GKXVXXXXXXXGXPPXGGGXGPPXXKKX 539
           PPP  G + P     PP        PPP G  G            PP  G  GPP     
Sbjct: 437 PPPPSGNYGPPPP--PPSGNYGPPPPPPSGNYGPPPPPSGNYGPPPPPSGNYGPPPPPS- 493

Query: 540 XXXGXPPP 563
              G PPP
Sbjct: 494 GNYGPPPP 501


>AE014298-2035|AAF48374.1|  993|Drosophila melanogaster CG9411-PA
           protein.
          Length = 993

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 22/68 (32%), Positives = 23/68 (33%), Gaps = 2/68 (2%)
 Frame = +3

Query: 366 PPPXXGXFXPXXKXXPPXFKKXFFXPPPXG--GKXVXXXXXXXGXPPXGGGXGPPXXKKX 539
           PPP  G + P     PP        PPP G  G            PP  G  GPP     
Sbjct: 437 PPPPSGNYGPPPP--PPSGNYGPPPPPPSGNYGPPPPPSGNYGPPPPPSGNYGPPPPPS- 493

Query: 540 XXXGXPPP 563
              G PPP
Sbjct: 494 GNYGPPPP 501


>AE014298-1168|AAF46366.1|  926|Drosophila melanogaster CG10555-PA
           protein.
          Length = 926

 Score = 29.9 bits (64), Expect = 5.1
 Identities = 19/66 (28%), Positives = 21/66 (31%)
 Frame = +3

Query: 366 PPPXXGXFXPXXKXXPPXFKKXFFXPPPXGGKXVXXXXXXXGXPPXGGGXGPPXXKKXXX 545
           P    G   P     PP   +    PP  G +         G PP GG   PP       
Sbjct: 524 PNAGAGQGPPPGAYPPPPGSQQV--PPVPGQQQPPPGPPPPGQPPTGGQQQPPPGPPQSQ 581

Query: 546 XGXPPP 563
            G PPP
Sbjct: 582 YGPPPP 587


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,142,598
Number of Sequences: 53049
Number of extensions: 602920
Number of successful extensions: 1528
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1317
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4484945457
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)