Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_F07
(914 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.38
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.38
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.38
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.50
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.50
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.50
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 31 1.1
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.7
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.7
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 6.1
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 6.1
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.7 bits (71), Expect = 0.38
Identities = 22/67 (32%), Positives = 22/67 (32%), Gaps = 1/67 (1%)
Frame = +3
Query: 366 PPPXXGXFXPXXKXXPPXFKKXFFXPPPXGGKXVXXXXXXXGXPPXGG-GXGPPXXKKXX 542
PPP G P PP PPP GG PP GG PP
Sbjct: 728 PPPPPGGLPPITGGPPP--------PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Query: 543 XXGXPPP 563
G PPP
Sbjct: 780 FKGGPPP 786
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = -2
Query: 907 GGXXKIFXGGAPXXXEXXXPPLXGEXTXPPPPXXG 803
GG I G P PP+ G PPPP G
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.7 bits (71), Expect = 0.38
Identities = 22/67 (32%), Positives = 22/67 (32%), Gaps = 1/67 (1%)
Frame = +3
Query: 366 PPPXXGXFXPXXKXXPPXFKKXFFXPPPXGGKXVXXXXXXXGXPPXGG-GXGPPXXKKXX 542
PPP G P PP PPP GG PP GG PP
Sbjct: 728 PPPPPGGLPPITGGPPP--------PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Query: 543 XXGXPPP 563
G PPP
Sbjct: 780 FKGGPPP 786
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = -2
Query: 907 GGXXKIFXGGAPXXXEXXXPPLXGEXTXPPPPXXG 803
GG I G P PP+ G PPPP G
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.7 bits (71), Expect = 0.38
Identities = 22/67 (32%), Positives = 22/67 (32%), Gaps = 1/67 (1%)
Frame = +3
Query: 366 PPPXXGXFXPXXKXXPPXFKKXFFXPPPXGGKXVXXXXXXXGXPPXGG-GXGPPXXKKXX 542
PPP G P PP PPP GG PP GG PP
Sbjct: 311 PPPPPGGLPPITGGPPP--------PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 362
Query: 543 XXGXPPP 563
G PPP
Sbjct: 363 FKGGPPP 369
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = -2
Query: 907 GGXXKIFXGGAPXXXEXXXPPLXGEXTXPPPPXXG 803
GG I G P PP+ G PPPP G
Sbjct: 316 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 350
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.3 bits (70), Expect = 0.50
Identities = 20/69 (28%), Positives = 20/69 (28%)
Frame = +3
Query: 366 PPPXXGXFXPXXKXXPPXFKKXFFXPPPXGGKXVXXXXXXXGXPPXGGGXGPPXXKKXXX 545
PPP G P PP PPP GG PP G P
Sbjct: 257 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQ 316
Query: 546 XGXPPPXKG 572
G PP G
Sbjct: 317 AGGSPPPAG 325
Score = 31.9 bits (69), Expect = 0.66
Identities = 22/77 (28%), Positives = 24/77 (31%), Gaps = 1/77 (1%)
Frame = +3
Query: 345 PPXXXKXPPPXXGXFXPXX-KXXPPXFKKXFFXPPPXGGKXVXXXXXXXGXPPXGGGXGP 521
PP PPP P PP PPP G PP GG P
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 291
Query: 522 PXXKKXXXXGXPPPXKG 572
P + PPP +G
Sbjct: 292 P---RAGSPPPPPPPRG 305
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/47 (29%), Positives = 16/47 (34%)
Frame = +3
Query: 774 PXSPXKKKXXPXXGGGGXVXSPXKGGXXXSXKXGAPPKKIFXXPPXP 914
P P K P G G P G + G+PP PP P
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 283
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +1
Query: 346 PPFXKXXPPPXXGXXPPXKKXXPPXLKXXFFXPPP 450
PP PPP G PP PP PPP
Sbjct: 258 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 292
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.3 bits (70), Expect = 0.50
Identities = 20/69 (28%), Positives = 20/69 (28%)
Frame = +3
Query: 366 PPPXXGXFXPXXKXXPPXFKKXFFXPPPXGGKXVXXXXXXXGXPPXGGGXGPPXXKKXXX 545
PPP G P PP PPP GG PP G P
Sbjct: 278 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQ 337
Query: 546 XGXPPPXKG 572
G PP G
Sbjct: 338 AGGSPPPAG 346
Score = 31.9 bits (69), Expect = 0.66
Identities = 22/77 (28%), Positives = 24/77 (31%), Gaps = 1/77 (1%)
Frame = +3
Query: 345 PPXXXKXPPPXXGXFXPXX-KXXPPXFKKXFFXPPPXGGKXVXXXXXXXGXPPXGGGXGP 521
PP PPP P PP PPP G PP GG P
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 312
Query: 522 PXXKKXXXXGXPPPXKG 572
P + PPP +G
Sbjct: 313 P---RAGSPPPPPPPRG 326
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/47 (29%), Positives = 16/47 (34%)
Frame = +3
Query: 774 PXSPXKKKXXPXXGGGGXVXSPXKGGXXXSXKXGAPPKKIFXXPPXP 914
P P K P G G P G + G+PP PP P
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 304
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +1
Query: 346 PPFXKXXPPPXXGXXPPXKKXXPPXLKXXFFXPPP 450
PP PPP G PP PP PPP
Sbjct: 279 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 313
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.3 bits (70), Expect = 0.50
Identities = 20/69 (28%), Positives = 20/69 (28%)
Frame = +3
Query: 366 PPPXXGXFXPXXKXXPPXFKKXFFXPPPXGGKXVXXXXXXXGXPPXGGGXGPPXXKKXXX 545
PPP G P PP PPP GG PP G P
Sbjct: 263 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQ 322
Query: 546 XGXPPPXKG 572
G PP G
Sbjct: 323 AGGSPPPAG 331
Score = 31.9 bits (69), Expect = 0.66
Identities = 22/77 (28%), Positives = 24/77 (31%), Gaps = 1/77 (1%)
Frame = +3
Query: 345 PPXXXKXPPPXXGXFXPXX-KXXPPXFKKXFFXPPPXGGKXVXXXXXXXGXPPXGGGXGP 521
PP PPP P PP PPP G PP GG P
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 297
Query: 522 PXXKKXXXXGXPPPXKG 572
P + PPP +G
Sbjct: 298 P---RAGSPPPPPPPRG 311
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/47 (29%), Positives = 16/47 (34%)
Frame = +3
Query: 774 PXSPXKKKXXPXXGGGGXVXSPXKGGXXXSXKXGAPPKKIFXXPPXP 914
P P K P G G P G + G+PP PP P
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 289
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +1
Query: 346 PPFXKXXPPPXXGXXPPXKKXXPPXLKXXFFXPPP 450
PP PPP G PP PP PPP
Sbjct: 264 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 298
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +1
Query: 346 PPFXKXXPPPXXGXXPPXKKXXPPXLKXXFFXPPPXG 456
PP+ + PP G PP + PP + + PP G
Sbjct: 42 PPWHRNRGPPPFGPPPPWDRPPPPWRRPPWHRRPPWG 78
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/73 (27%), Positives = 21/73 (28%)
Frame = +3
Query: 345 PPXXXKXPPPXXGXFXPXXKXXPPXFKKXFFXPPPXGGKXVXXXXXXXGXPPXGGGXGPP 524
P + PPP P PP PP G G P GG PP
Sbjct: 281 PGMTPRPPPPPSSGMWPPPPPPPPGRTPG---PPGMPGMPPPPPPSRFGPPGMGGMPPPP 337
Query: 525 XXKKXXXXGXPPP 563
G PPP
Sbjct: 338 PPGMRYPGGMPPP 350
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/73 (27%), Positives = 21/73 (28%)
Frame = +3
Query: 345 PPXXXKXPPPXXGXFXPXXKXXPPXFKKXFFXPPPXGGKXVXXXXXXXGXPPXGGGXGPP 524
P + PPP P PP PP G G P GG PP
Sbjct: 291 PGMTPRPPPPPSSGMWPPPPPPPPGRTPG---PPGMPGMPPPPPPSRFGPPGMGGMPPPP 347
Query: 525 XXKKXXXXGXPPP 563
G PPP
Sbjct: 348 PPGMRYPGGMPPP 360
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 28.7 bits (61), Expect = 6.1
Identities = 21/64 (32%), Positives = 21/64 (32%)
Frame = +3
Query: 366 PPPXXGXFXPXXKXXPPXFKKXFFXPPPXGGKXVXXXXXXXGXPPXGGGXGPPXXKKXXX 545
PPP G P PP F PPP GG G PP G PP
Sbjct: 411 PPPPGGPGAP-GSYGPPQGGPGGFGPPPPGGPGA-YGPPPTGFPPVG---APPPGAAGAP 465
Query: 546 XGXP 557
G P
Sbjct: 466 GGNP 469
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +3
Query: 441 PPPXGGKXVXXXXXXXGXPPXGGGXGPPXXKKXXXXGXPPP 563
PPP GG G PP G PP G PPP
Sbjct: 1574 PPPRGGSHCQGPPPLMGGPPPRLGM-PPPGPPPPNGGPPPP 1613
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,770,130
Number of Sequences: 27780
Number of extensions: 246986
Number of successful extensions: 801
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 590
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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