Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_F06
         (924 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1540 - 27570605-27571375,27571474-27572748,27572769-275729...    30   3.0  
05_03_0635 - 16446805-16447716                                         29   3.9  
11_06_0264 - 21785450-21786928                                         29   5.2  
02_02_0419 - 10009686-10012568                                         29   6.9  

>07_03_1540 -
           27570605-27571375,27571474-27572748,27572769-27572921,
           27572923-27573159
          Length = 811

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 17/57 (29%), Positives = 30/57 (52%)
 Frame = +1

Query: 271 KLLINDQELGTATLYITENNVIWGGGVSPSGNPAPTINLLYPSISLHAIQREPSPAL 441
           KL++ D ELG+  L + E + +  G   P G+P   + +L    S+HA+  +  P +
Sbjct: 405 KLIVADNELGSLKLAL-EGSYVEPG---PGGDPIHNLKVLPTGKSIHALDPQTMPTI 457


>05_03_0635 - 16446805-16447716
          Length = 303

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
 Frame = -3

Query: 661 GHHHRPHQPDPDAILV--HDTWPNTWLVIRSRFXG 563
           G H RP  PD DA++V  H  + N W  I     G
Sbjct: 69  GVHRRPFTPDEDALIVAAHAKYGNKWATIARLLDG 103


>11_06_0264 - 21785450-21786928
          Length = 492

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +1

Query: 340 GGGVSPSGNPAPTINLLYPSISLHAIQREPSPALYMVL 453
           GGG + S +P+P    +  S S H     P P  Y+ +
Sbjct: 299 GGGAASSSSPSPVARTVLSSPSPHQYSSGPKPTQYLAV 336


>02_02_0419 - 10009686-10012568
          Length = 960

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
 Frame = +1

Query: 304 ATLYITENNVIWGGGVSPSGNP---APTINLLYPSISLHAIQREPSPALYMVLNYELRLP 474
           A L +++NN+I G GVSPS  P       +L Y ++S   +  E  P L  +    LR  
Sbjct: 116 AYLDLSQNNLIGGDGVSPSPLPRFLGSLCDLRYLNLSFTGLAGEIPPQLGNLT--RLRQL 173

Query: 475 ELSQQAG 495
           +LS   G
Sbjct: 174 DLSSNVG 180


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,330,487
Number of Sequences: 37544
Number of extensions: 323493
Number of successful extensions: 680
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 679
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2635816500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)