Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_F04
         (813 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   1.6  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   3.7  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   6.4  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +2

Query: 680 GGGGGXCXPPPXGGGGXXXPXPPG 751
           GGGG     P  GGG    P P G
Sbjct: 203 GGGGSGGGAPGGGGGSSGGPGPGG 226



 Score = 25.8 bits (54), Expect = 1.6
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +2

Query: 680 GGGGGXCXPPPXGGGG 727
           GGGG    P P GGGG
Sbjct: 214 GGGGSSGGPGPGGGGG 229



 Score = 25.4 bits (53), Expect = 2.1
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +2

Query: 680 GGGGGXCXPPPXGGGG 727
           GGGGG    P  GGGG
Sbjct: 213 GGGGGSSGGPGPGGGG 228



 Score = 24.2 bits (50), Expect = 4.8
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +1

Query: 685 GGGXLFXPPXGGGGXXXSXPPGXG 756
           GGG     P GGGG      PG G
Sbjct: 204 GGGSGGGAPGGGGGSSGGPGPGGG 227


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 12/25 (48%), Positives = 12/25 (48%), Gaps = 1/25 (4%)
 Frame = -2

Query: 758 RPXPGGXXKXXPPPPXGG-XNNXPP 687
           R   GG     PPPP GG   N PP
Sbjct: 521 RDLTGGPLGPPPPPPPGGAVLNIPP 545


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +1

Query: 679 GXGGGXLFXPPXGGGGXXXSXPPG 750
           G GGG     P GGGG   S   G
Sbjct: 691 GSGGGLASGSPYGGGGHHLSHHHG 714


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 501,953
Number of Sequences: 2352
Number of extensions: 8170
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86071221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)