Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_F03
(919 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical pr... 253 2e-67
Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical pr... 168 4e-42
U00036-14|ABC71802.1| 672|Caenorhabditis elegans Hypothetical p... 128 5e-30
U00036-13|ABC71803.1| 479|Caenorhabditis elegans Hypothetical p... 128 5e-30
AF143150-1|AAD37916.1| 222|Caenorhabditis elegans heat shock pr... 128 5e-30
Z68227-2|CAA92509.1| 322|Caenorhabditis elegans Hypothetical pr... 33 0.29
U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to tran... 31 1.5
U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to tran... 31 1.5
Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical pr... 28 1.9
U39999-12|AAA81110.1| 577|Caenorhabditis elegans Hypothetical p... 30 2.7
Z81139-3|CAB03482.1| 520|Caenorhabditis elegans Hypothetical pr... 28 8.1
>Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical
protein C47E8.5 protein.
Length = 702
Score = 253 bits (619), Expect = 2e-67
Identities = 122/141 (86%), Positives = 136/141 (96%)
Frame = +2
Query: 209 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELY 388
ETFAFQAEIAQLMSLIINTFYSNKEI+LRELISN+SDALDKIRY++LT+PS+LD+GKEL+
Sbjct: 6 ETFAFQAEIAQLMSLIINTFYSNKEIYLRELISNASDALDKIRYQALTEPSELDTGKELF 65
Query: 389 IKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVG 568
IKI PNK E TLTI+DTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVG
Sbjct: 66 IKITPNKEEKTLTIMDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVG 125
Query: 569 FYSSYLVADRVTVHSKHNDDE 631
FYS++LVAD+V V SK+NDD+
Sbjct: 126 FYSAFLVADKVVVTSKNNDDD 146
Score = 44.8 bits (101), Expect = 9e-05
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = +1
Query: 703 RGTKIVLHVKEDLAEFMEEHKIXEIVK 783
RGTKIV+H+KED +F+EE KI EIVK
Sbjct: 170 RGTKIVMHIKEDQIDFLEERKIKEIVK 196
Score = 33.5 bits (73), Expect = 0.22
Identities = 24/74 (32%), Positives = 30/74 (40%)
Frame = +3
Query: 642 WESSAGGSFTVRPDSGEPLGSRYKDRPSRQRGLGRIHGRTQNXRDRKEXXQFIGYPIXXX 821
WESSAGGSF VRP + + K + + K+ QFIGYPI
Sbjct: 150 WESSAGGSFVVRPFNDPEVTRGTKIVMHIKEDQIDFLEERKIKEIVKKHSQFIGYPIKLV 209
Query: 822 XXXXXXXXXSDDEA 863
D+EA
Sbjct: 210 VEKEREKEVEDEEA 223
>Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical
protein T05E11.3 protein.
Length = 760
Score = 168 bits (409), Expect = 4e-42
Identities = 85/150 (56%), Positives = 110/150 (73%), Gaps = 5/150 (3%)
Frame = +2
Query: 200 AEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGK 379
++ E FQAE+ ++M LIIN+ Y NKEIFLRELISN+SDALDKIR SLTDP +L +
Sbjct: 59 SKAEKHEFQAEVNRMMKLIINSLYRNKEIFLRELISNASDALDKIRLLSLTDPEQLRETE 118
Query: 380 ELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADIS----- 544
E+ +KI ++ L I DTG+GMT+ DL+NNLGTIA+SGT F+ L A S
Sbjct: 119 EMSVKIKADRENRLLHITDTGVGMTRQDLINNLGTIARSGTSEFLSKLMDTATSSDQQQD 178
Query: 545 MIGQFGVGFYSSYLVADRVTVHSKHNDDEQ 634
+IGQFGVGFY+++LVADRV V +K+NDD+Q
Sbjct: 179 LIGQFGVGFYAAFLVADRVVVTTKNNDDDQ 208
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +1
Query: 697 LGRGTKIVLHVKEDLAEFMEEHKIXEIV 780
L RGT+I L++KE+ A+F+E + +V
Sbjct: 229 LKRGTQITLYLKEEAADFLEPDTLKNLV 256
>U00036-14|ABC71802.1| 672|Caenorhabditis elegans Hypothetical
protein R151.7a protein.
Length = 672
Score = 128 bits (309), Expect = 5e-30
Identities = 69/148 (46%), Positives = 98/148 (66%)
Frame = +2
Query: 173 MPEEMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLT 352
+P + +E + FQAE LM ++ + YS+ E+F+RELISN+SDAL+K RY L
Sbjct: 31 VPTQRRWMASEPQRHEFQAETRNLMDIVAKSLYSHSEVFVRELISNASDALEKRRYAEL- 89
Query: 353 DPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAG 532
+ G I+I NK++ T+T DTGIGM + DLV LGTIAKSG+K F+E +
Sbjct: 90 -KGDVAEGPS-EIRITTNKDKRTITFEDTGIGMNREDLVKFLGTIAKSGSKDFIENNKEN 147
Query: 533 ADISMIGQFGVGFYSSYLVADRVTVHSK 616
A+ ++IGQFGVGFYS+++VAD V V ++
Sbjct: 148 AE-AVIGQFGVGFYSAFMVADSVVVTTR 174
>U00036-13|ABC71803.1| 479|Caenorhabditis elegans Hypothetical
protein R151.7b protein.
Length = 479
Score = 128 bits (309), Expect = 5e-30
Identities = 69/148 (46%), Positives = 98/148 (66%)
Frame = +2
Query: 173 MPEEMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLT 352
+P + +E + FQAE LM ++ + YS+ E+F+RELISN+SDAL+K RY L
Sbjct: 31 VPTQRRWMASEPQRHEFQAETRNLMDIVAKSLYSHSEVFVRELISNASDALEKRRYAEL- 89
Query: 353 DPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAG 532
+ G I+I NK++ T+T DTGIGM + DLV LGTIAKSG+K F+E +
Sbjct: 90 -KGDVAEGPS-EIRITTNKDKRTITFEDTGIGMNREDLVKFLGTIAKSGSKDFIENNKEN 147
Query: 533 ADISMIGQFGVGFYSSYLVADRVTVHSK 616
A+ ++IGQFGVGFYS+++VAD V V ++
Sbjct: 148 AE-AVIGQFGVGFYSAFMVADSVVVTTR 174
>AF143150-1|AAD37916.1| 222|Caenorhabditis elegans heat shock
protein 75 protein.
Length = 222
Score = 128 bits (309), Expect = 5e-30
Identities = 69/148 (46%), Positives = 98/148 (66%)
Frame = +2
Query: 173 MPEEMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLT 352
+P + +E + FQAE LM ++ + YS+ E+F+RELISN+SDAL+K RY L
Sbjct: 31 VPTQRRWMASEPQRHEFQAETRNLMDIVAKSLYSHSEVFVRELISNASDALEKRRYAEL- 89
Query: 353 DPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAG 532
+ G I+I NK++ T+T DTGIGM + DLV LGTIAKSG+K F+E +
Sbjct: 90 -KGDVAEGPS-EIRITTNKDKRTITFEDTGIGMNREDLVKFLGTIAKSGSKDFIENNKEN 147
Query: 533 ADISMIGQFGVGFYSSYLVADRVTVHSK 616
A+ ++IGQFGVGFYS+++VAD V V ++
Sbjct: 148 AE-AVIGQFGVGFYSAFMVADSVVVTTR 174
>Z68227-2|CAA92509.1| 322|Caenorhabditis elegans Hypothetical
protein F49C12.4 protein.
Length = 322
Score = 33.1 bits (72), Expect = 0.29
Identities = 19/64 (29%), Positives = 35/64 (54%)
Frame = +2
Query: 257 INTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIID 436
+N + N ++F ++ +S+ + YESLT + + +I I+PNK E +T++
Sbjct: 75 LNPYRGNHDLFWSAFVNKTSECDNLKEYESLTIRPVANKDEVKFI-ILPNK-ETNITMVT 132
Query: 437 TGIG 448
GIG
Sbjct: 133 LGIG 136
>U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform a
protein.
Length = 428
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Frame = +1
Query: 388 HQDHSQQERGHSYDHRYRYWYDQGR-FGEQFGNHREIWY*SFHGGSSSRCRHQHD 549
H DH GHS+DH +D G G NH S GS + H HD
Sbjct: 376 HDDHGHDSHGHSHDHNE---HDHGHSHGGNNDNHGH----SHSAGSDNHHGHSHD 423
>U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform b
protein.
Length = 446
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Frame = +1
Query: 388 HQDHSQQERGHSYDHRYRYWYDQGR-FGEQFGNHREIWY*SFHGGSSSRCRHQHD 549
H DH GHS+DH +D G G NH S GS + H HD
Sbjct: 394 HDDHGHDSHGHSHDHNE---HDHGHSHGGNNDNHGH----SHSAGSDNHHGHSHD 441
>Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical
protein H13N06.5 protein.
Length = 462
Score = 28.3 bits (60), Expect(2) = 1.9
Identities = 11/47 (23%), Positives = 22/47 (46%)
Frame = +1
Query: 409 ERGHSYDHRYRYWYDQGRFGEQFGNHREIWY*SFHGGSSSRCRHQHD 549
+ GH++DH + + +D G + G+ + HG + H H+
Sbjct: 77 DHGHAHDHDHGHAHDHGHAHDHHGHSHDEEEDHHHGHAHDHHGHSHE 123
Score = 20.6 bits (41), Expect(2) = 1.9
Identities = 7/19 (36%), Positives = 8/19 (42%)
Frame = +1
Query: 376 QRAVHQDHSQQERGHSYDH 432
Q HQ H GH + H
Sbjct: 36 QNVHHQGHGHAHGGHGHAH 54
>U39999-12|AAA81110.1| 577|Caenorhabditis elegans Hypothetical
protein F41G3.3 protein.
Length = 577
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 403 QQERGHSYDHRYRYWYDQGRFGEQFGN 483
+Q+ H YD RY YD + E +GN
Sbjct: 48 KQQEAHHYDDRYNNTYDNYDYEEDYGN 74
>Z81139-3|CAB03482.1| 520|Caenorhabditis elegans Hypothetical
protein W05H5.3 protein.
Length = 520
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/69 (21%), Positives = 28/69 (40%)
Frame = +2
Query: 440 GIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSSYLVADRVTVHSKH 619
G+GM D+ ++ GT +G +A + M+G GF V S
Sbjct: 53 GVGMGANDIADSFGTSVGTGILTVTQAFILATVVEMMGSVASGFSGDGQQLQVVNTESYE 112
Query: 620 NDDEQXRVG 646
++ ++ +G
Sbjct: 113 DNPDELVIG 121
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,958,046
Number of Sequences: 27780
Number of extensions: 408318
Number of successful extensions: 1129
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1122
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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