Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_F01
(911 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 146 9e-34
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 95 2e-18
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 93 7e-18
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 86 1e-15
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 69 1e-10
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 58 4e-07
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 56 2e-06
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 55 3e-06
UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ... 52 3e-05
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 51 5e-05
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 42 0.022
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.050
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.088
UniRef50_A6SWU5 Cluster: Uncharacterized conserved protein; n=1;... 36 1.9
UniRef50_Q02779 Cluster: Mitogen-activated protein kinase kinase... 35 2.5
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2... 35 3.3
UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1; Lentisp... 34 5.8
UniRef50_A2YSU8 Cluster: Putative uncharacterized protein; n=4; ... 34 5.8
UniRef50_A5HC74 Cluster: Putative uncharacterized protein; n=1; ... 34 5.8
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.8
UniRef50_Q4RMS4 Cluster: Chromosome 3 SCAF15018, whole genome sh... 33 7.7
UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer ariet... 33 7.7
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 146 bits (353), Expect = 9e-34
Identities = 73/90 (81%), Positives = 75/90 (83%)
Frame = +3
Query: 477 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 656
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 657 CRLPDTCPPFSLRXPXGKRGAFLIAHAVGI 746
CRLPDTCPPFSLR + FLIAHAVGI
Sbjct: 62 CRLPDTCPPFSLR----EAWRFLIAHAVGI 87
Score = 64.1 bits (149), Expect = 5e-09
Identities = 37/62 (59%), Positives = 39/62 (62%), Gaps = 6/62 (9%)
Frame = +2
Query: 689 PSXTXREAWRF--SH----SSRCRYLXSGVXRSLPSWAVRTNPPFSPTXAPYPVTIVLSP 850
P + REAWRF +H S RCR PSWAV TNPPFSPT APYPVTIVLSP
Sbjct: 69 PPFSLREAWRFLIAHAVGISVRCRSFA-------PSWAVCTNPPFSPTAAPYPVTIVLSP 121
Query: 851 XR 856
R
Sbjct: 122 TR 123
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 95.1 bits (226), Expect = 2e-18
Identities = 45/54 (83%), Positives = 47/54 (87%)
Frame = +3
Query: 495 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 656
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL APSCALLF P
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 93.5 bits (222), Expect = 7e-18
Identities = 45/56 (80%), Positives = 46/56 (82%)
Frame = +3
Query: 501 RPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLP 668
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL APSCALLF P LP
Sbjct: 78 RPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +2
Query: 308 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLT 406
R +C G +PLPRSLTR ARSFGCGERY+LT
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 85.8 bits (203), Expect = 1e-15
Identities = 49/96 (51%), Positives = 54/96 (56%)
Frame = -2
Query: 856 PGWTQDDSYXXXXXXXXXRGVXANSPAWERTTYTRXEIPTA*AMRKAPRFPXGXRREKGG 677
PGWTQDDSY RGV A SPAW + + + KAPRFP G + E
Sbjct: 8 PGWTQDDSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSV-SYEKAPRFPKGKKAE--- 63
Query: 676 QVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT 569
QVSGKRQGRNRRAHEGA+ K SL PPLT
Sbjct: 64 QVSGKRQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 69.3 bits (162), Expect = 1e-10
Identities = 41/60 (68%), Positives = 42/60 (70%)
Frame = -2
Query: 550 MLVRGAEPMEKRQQRGLFTVPGLLLAFCSHVLSCVIPLILWITVLPPLSELIPLAAAERP 371
MLVRGAEPMEKR + L V LL CS L PLILWITVLPPLSEL PLAA ERP
Sbjct: 1 MLVRGAEPMEKRLRCWLLPVLCFLLT-CSFRL---YPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 57.6 bits (133), Expect = 4e-07
Identities = 29/40 (72%), Positives = 31/40 (77%)
Frame = +2
Query: 635 VRSPVPTLPLTGYLSAFLPSXTXREAWRFSHSSRCRYLXS 754
+RSPVPTLPLTGYLSAFLPS + SHSSRCRYL S
Sbjct: 1 MRSPVPTLPLTGYLSAFLPSGSV----ALSHSSRCRYLSS 36
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 55.6 bits (128), Expect = 2e-06
Identities = 31/54 (57%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +2
Query: 284 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQG 442
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQG 319
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 54.8 bits (126), Expect = 3e-06
Identities = 31/58 (53%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +2
Query: 722 SHSSRCRYLXSGVXRSL-PSWAVRTNPPFSPTXAPYPVTIVLSPXR*XTNFSPLAQPW 892
SHSS S RS PSWAV NPPFSPT APYPVT+ LSP R T + + W
Sbjct: 70 SHSSHSGI--SARCRSFAPSWAVSKNPPFSPTAAPYPVTVHLSPTRKSTQNATGSSHW 125
Score = 49.2 bits (112), Expect = 1e-04
Identities = 35/71 (49%), Positives = 39/71 (54%)
Frame = +1
Query: 598 IKIPGVSPWKLPRALSCSDPAAYRIPVRLSPFGNLXGSVALFS*LTL*VSXFGCXSFAPK 777
+KI VS LP ALSCS+PA RIPV PF +L GSVAL +S C SFAP
Sbjct: 32 LKIITVSDESLPLALSCSNPAVSRIPV--PPF-SLAGSVALSHSSHSGISA-RCRSFAPS 87
Query: 778 LGCSHXPPVQP 810
S PP P
Sbjct: 88 WAVSKNPPFSP 98
>UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11;
cellular organisms|Rep: Uncharacterized 9.4 kDa protein
- Escherichia coli
Length = 84
Score = 51.6 bits (118), Expect = 3e-05
Identities = 23/33 (69%), Positives = 23/33 (69%)
Frame = +1
Query: 790 HXPPVQPDRCALSGNYRLESXPVXXXFFXLGTA 888
H PPVQPDRCALSGNYRLES PV L A
Sbjct: 2 HEPPVQPDRCALSGNYRLESNPVRHDLSPLAAA 34
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 50.8 bits (116), Expect = 5e-05
Identities = 27/71 (38%), Positives = 39/71 (54%)
Frame = +3
Query: 444 ITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL 623
I +R + + + P T F S PLT+ITKI Q + +T+ +YK T FPL
Sbjct: 44 IMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPL 103
Query: 624 EAPSCALLFRP 656
++PS +LLF P
Sbjct: 104 QSPSYSLLFPP 114
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 87 DPDMIRYIDEFGQTTTRMQ 143
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 41.9 bits (94), Expect = 0.022
Identities = 21/34 (61%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -2
Query: 859 LPGWTQDDSYXXXXXXXXXRGVXANSPAW-ERTT 761
LPGWTQDDSY RGV A+SPAW ER T
Sbjct: 7 LPGWTQDDSYRIRRSGRAERGVRAHSPAWSERPT 40
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 40.7 bits (91), Expect = 0.050
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +3
Query: 282 SALMNRPTRGERRFAYW 332
+ALMNRPTRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.088
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3
Query: 354 ERGSGRAPNTQTASPRALADSLMQ 283
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A6SWU5 Cluster: Uncharacterized conserved protein; n=1;
Janthinobacterium sp. Marseille|Rep: Uncharacterized
conserved protein - Janthinobacterium sp. (strain
Marseille) (Minibacterium massiliensis)
Length = 212
Score = 35.5 bits (78), Expect = 1.9
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = -2
Query: 577 PLT*ASIFVMLVRGAEPMEKRQQRGL---FTVPGLLLAFCSHVLSCVIPLILWITVLPPL 407
PLT AS+ + L+ P+ + + RGL T+ G ++A +S V L+L T+L PL
Sbjct: 50 PLTVASLIMFLIANLFPIVEIELRGLRSQTTLTGAVMALAGEGMSLVAMLVLATTLLFPL 109
Query: 406 SELIPL 389
+L+ L
Sbjct: 110 LQLLIL 115
>UniRef50_Q02779 Cluster: Mitogen-activated protein kinase kinase
kinase 10; n=21; Euteleostomi|Rep: Mitogen-activated
protein kinase kinase kinase 10 - Homo sapiens (Human)
Length = 954
Score = 35.1 bits (77), Expect = 2.5
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = -1
Query: 719 SATLPXRXPKGERRT-GIR*AAGSEQESARGSFQGETPGIFIVLSGFATSDLSVDFCDAR 543
S+TL GE R G+ GS+Q S+ G++P + GFA+ + +F +A
Sbjct: 562 SSTLQKERVGGEERLKGL--GEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAE 619
Query: 542 QGGGAYGKTPATRPFYGSWP 483
GG + +P + P Y S P
Sbjct: 620 DGGSSVPPSPYSTPSYLSVP 639
>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
cellular organisms|Rep: Putative uncharacterized protein
1 - Escherichia coli
Length = 47
Score = 34.7 bits (76), Expect = 3.3
Identities = 19/36 (52%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -2
Query: 856 PGWTQDDSYXXXXXXXXXRGVXANSPAW-ERTTYTR 752
PGWTQ +SY RGV A SPAW ER T +R
Sbjct: 8 PGWTQVNSYRIRRSSRAERGVLAYSPAWSERPTPSR 43
>UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ECF sigma
factor - Lentisphaera araneosa HTCC2155
Length = 201
Score = 33.9 bits (74), Expect = 5.8
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +3
Query: 165 EICDAIALFVTIISCNKQVNNNNCIHFMFQVQGEVWEVFSALMNRPTRGERRFAYW 332
+ DA F+ I N +N+++C + +V +VWE + P RG +F YW
Sbjct: 32 DFSDAYRRFIYIALRNNGLNHHDCEEVVQRVMIKVWEKIARFKYNPGRG--KFRYW 85
>UniRef50_A2YSU8 Cluster: Putative uncharacterized protein; n=4;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 236
Score = 33.9 bits (74), Expect = 5.8
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +1
Query: 589 DRTIKIPGVSPWKLPRALSCSDPAAYRIPVRLSPFGNLXGSVAL 720
D G +PW+L R+LSC A + +P+ NL G + L
Sbjct: 167 DAAAAAAGWAPWRLIRSLSCKGIEAVAVAAAAAPYHNLLGLILL 210
>UniRef50_A5HC74 Cluster: Putative uncharacterized protein; n=1;
Adineta vaga|Rep: Putative uncharacterized protein -
Adineta vaga
Length = 400
Score = 33.9 bits (74), Expect = 5.8
Identities = 22/64 (34%), Positives = 32/64 (50%)
Frame = -1
Query: 617 ETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRPFYGSWPFAGLLLTCSFLRYPP 438
E GIF GF + L +D C + GG A +T + G+W + G L C+ + PP
Sbjct: 247 EGGGIF-KRKGFYYTMLGIDCCFCQWGGDA--RTFISNNPLGNWTYFGQLNYCADGKAPP 303
Query: 437 DSVD 426
D +D
Sbjct: 304 DHID 307
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.8
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -1
Query: 245 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 81
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
>UniRef50_Q4RMS4 Cluster: Chromosome 3 SCAF15018, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 3
SCAF15018, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 754
Score = 33.5 bits (73), Expect = 7.7
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +3
Query: 411 GGNTVIHRIRGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETR 590
GG+ V ++GI+ ERT + +P + PR W S+ P + +++GG+ R
Sbjct: 611 GGHGVPGELQGIS-ERTLLELTRGKP-LLSHPRAWFVSLDGKPAAQVRHSIIELQGGQRR 668
Query: 591 QDYKDT 608
DT
Sbjct: 669 PSSNDT 674
>UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer
arietinum|Rep: Reverse transcriptase - Cicer arietinum
(Chickpea) (Garbanzo)
Length = 37
Score = 33.5 bits (73), Expect = 7.7
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 417 NTVIHRIRGITQERTCE 467
NTVIH +GITQERTCE
Sbjct: 21 NTVIHXNQGITQERTCE 37
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 825,969,107
Number of Sequences: 1657284
Number of extensions: 16365204
Number of successful extensions: 45798
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 43456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45761
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 83211448033
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -