Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_F01
         (911 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0891 + 8775537-8776127,8776403-8776513                           34   0.18 
06_03_0833 - 25196091-25196372,25196464-25196565,25196640-251968...    31   1.7  
04_03_0383 + 15179587-15180162,15180334-15181149,15181548-15182789     29   6.8  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   9.0  
02_01_0016 + 110796-110979,111252-111768,111847-112213                 28   9.0  

>08_01_0891 + 8775537-8776127,8776403-8776513
          Length = 233

 Score = 33.9 bits (74), Expect = 0.18
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +1

Query: 589 DRTIKIPGVSPWKLPRALSCSDPAAYRIPVRLSPFGNLXGSVAL 720
           D      G +PW+L R+LSC    A  +    +P+ NL G + L
Sbjct: 164 DAAAAAAGWAPWRLIRSLSCKGIEAVAVAAAAAPYHNLLGLILL 207


>06_03_0833 -
           25196091-25196372,25196464-25196565,25196640-25196838,
           25196978-25197278,25197471-25197645,25197842-25198012,
           25198207-25198239
          Length = 420

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 16/53 (30%), Positives = 21/53 (39%)
 Frame = +3

Query: 510 CWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLP 668
           CWR  +        T  D Q    +    +KD    P + PSC L+F P   P
Sbjct: 283 CWRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIFIPLLQP 335


>04_03_0383 + 15179587-15180162,15180334-15181149,15181548-15182789
          Length = 877

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -2

Query: 724 RKAPRFPXGXRREKGGQVSGKRQGRNRRAHEGASRGKR 611
           R  P    G  R +GG+  G+ +GR+     G+SRG R
Sbjct: 85  RPPPAAGGGRGRSRGGRGGGRGRGRSLTNGAGSSRGMR 122


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +2

Query: 290 NESAN---ARGEAVCVLGALPLPRSLTRCAR 373
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>02_01_0016 + 110796-110979,111252-111768,111847-112213
          Length = 355

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 23/71 (32%), Positives = 28/71 (39%)
 Frame = +2

Query: 617 PPGSSLVRSPVPTLPLTGYLSAFLPSXTXREAWRFSHSSRCRYLXSGVXRSLPSWAVRTN 796
           PP  +L  SP+PT P+        P+      WR     R R L      + PS  V T 
Sbjct: 161 PPALALAPSPIPT-PIIAPPPVSSPAPPLPPLWR----RRPRRLPPIWRPTPPSLPVDTM 215

Query: 797 PPFSPTXAPYP 829
           PP  P   P P
Sbjct: 216 PPPPPPPPPQP 226


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,254,380
Number of Sequences: 37544
Number of extensions: 493351
Number of successful extensions: 1500
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1500
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)