Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_E24
(916 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9.07c |||GTPase Rbg1 |Schizosaccharomyces pombe|chr 1|||Manual 29 0.92
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 29 0.92
SPBC1604.08c |imp1||importin alpha|Schizosaccharomyces pombe|chr... 29 0.92
SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomy... 29 0.92
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 29 1.2
SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces pom... 28 1.6
SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2 |Schizosacc... 28 2.1
SPBC18H10.15 |ppk23||serine/threonine protein kinase Ppk23|Schiz... 27 3.7
SPAPYUG7.02c |sin1||stress activated MAP kinase interacting prot... 27 3.7
SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|c... 27 3.7
SPAC1039.04 |||nicotinic acid plasma membrane transporter |Schiz... 27 4.9
SPBC14C8.01c |cut2|SPBC1815.02c|securin|Schizosaccharomyces pomb... 27 4.9
SPBC354.01 |gtp1|SPBC649.06|GTP binding protein Gtp1|Schizosacch... 27 4.9
SPCC645.02 |||conserved protein |Schizosaccharomyces pombe|chr 3... 27 4.9
SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint compone... 27 4.9
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 26 6.5
SPAC17G8.13c |mst2||histone acetyltransferase Mst2|Schizosacchar... 26 6.5
SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces po... 26 6.5
SPAC23D3.06c |nup146||nucleoporin Nup146|Schizosaccharomyces pom... 26 6.5
SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subuni... 26 8.6
SPAC23D3.03c |||GTPase activating protein |Schizosaccharomyces p... 26 8.6
SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyce... 26 8.6
SPCC594.02c |||conserved fungal protein|Schizosaccharomyces pomb... 26 8.6
>SPAC9.07c |||GTPase Rbg1 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 366
Score = 29.1 bits (62), Expect = 0.92
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +2
Query: 269 STTDDLKEFEKIKINTEKNKSISERVSIFKGDITKLEIDAIVNAANSRLKAGGGV 433
+T +KE E T+KNK+ ++ + + K + KL+ + I GGG+
Sbjct: 3 TTAQKIKEVEDEMAKTQKNKATAKHLGMLKAKLAKLKRELITPTGGG---GGGGL 54
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 29.1 bits (62), Expect = 0.92
Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 7/83 (8%)
Frame = -2
Query: 639 WYSCWYDRH---FS*QDSSFSADPSWGPTVWMIYLAGKL*PPVTL---ASPVGHPPIESH 478
W + W +R+ F +S A P W V + + PP ++ A P G PP S+
Sbjct: 13 WVAQWDERYKCYFYVNESDPKAKPQWECPVRGLTIP----PPPSVDHSAPPSGPPPSYSN 68
Query: 477 SACKKGPAARC-MAPSTPPPAFS 412
SA PAA A P PA S
Sbjct: 69 SAAPATPAASASSAAPAPAPAAS 91
>SPBC1604.08c |imp1||importin alpha|Schizosaccharomyces pombe|chr
2|||Manual
Length = 539
Score = 29.1 bits (62), Expect = 0.92
Identities = 16/67 (23%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Frame = +2
Query: 68 YSSTNSXVFPVATMVNSTKWEIEKNRILKLSLEEKRKIYKSSDF---IDLENVDPWSKYL 238
Y + + P+ M+N + N+I++++L+ I K + +DLEN++ ++ Y+
Sbjct: 414 YLVSQGVIKPLCDMLNGSD-----NKIIQVALDAIENILKVGEMDRTMDLENINQYAVYV 468
Query: 239 NKSQGID 259
++ G+D
Sbjct: 469 EEAGGMD 475
>SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 667
Score = 29.1 bits (62), Expect = 0.92
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +2
Query: 164 EEKRKIYKSSDFIDLENVDPWSKYLNKSQGIDSKKSTTDDLKEFEK 301
++K+K K ++D S K +G++S K+ DD+ E EK
Sbjct: 100 KKKKKQQKKKKVTGKRDLDNQSSDNEKLEGLESSKNIDDDIDEIEK 145
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 28.7 bits (61), Expect = 1.2
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Frame = +2
Query: 128 EIEKNRILKLS-LEEKRKIYKSS--DFIDLENVDPWSKYLNKSQG---IDSKKSTTDDLK 289
EI +N +LK+S LE +K Y+ D L++VD + L+K + +
Sbjct: 1155 EIHENLLLKVSDLENYKKKYEGLQLDLEGLKDVDTNFQELSKKHRDLTFNHESLLRQSAS 1214
Query: 290 EFEKIKINTEKNKSISERVSIFKGDITKL 376
EK+ + + +NK +S +VS + +L
Sbjct: 1215 YKEKLSLASSENKDLSNKVSSLTKQVNEL 1243
>SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 659
Score = 28.3 bits (60), Expect = 1.6
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = +2
Query: 215 VDPWSKYLNKSQGIDSKKSTTDDLKEFEKIKINTEKNKSISERVSIFKGDITKLE 379
+D S YL++ + ++S + ++ L + K ++ K KSIS+ K +I +LE
Sbjct: 220 IDSSSNYLSRIEMLESSLAKSNSLLDSSKSEMEALKAKSISDATK-HKNEIFQLE 273
>SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 830
Score = 27.9 bits (59), Expect = 2.1
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = -2
Query: 492 PIESHSACKKGPAARCMAPSTPPPAFSLELA-AFTIASISSLVMSPLKIETRSEMDL 325
P ES ++ G + PS+PPP FS E A A I L L +E DL
Sbjct: 16 PFESENS-SLGATPLSLPPSSPPPEFSDEAAEALVEEDIEDLDGEALDVEDEEGEDL 71
>SPBC18H10.15 |ppk23||serine/threonine protein kinase
Ppk23|Schizosaccharomyces pombe|chr 2|||Manual
Length = 398
Score = 27.1 bits (57), Expect = 3.7
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +2
Query: 110 VNSTKWEIEKNRILKLSLEEKRKIYKSSDFIDLENVDPWSKYLNKSQGIDSKKSTTDDLK 289
+ + K E E + +L + KRKI + + + N+D YL + ++ DD +
Sbjct: 16 IENQKLEEEWRKKRRLEKKRKRKILEEEEKAEERNIDACRLYLMGNTPELKSCNSIDDYE 75
Query: 290 EFEKIK 307
EKI+
Sbjct: 76 ILEKIE 81
>SPAPYUG7.02c |sin1||stress activated MAP kinase interacting protein
Sin1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/42 (26%), Positives = 24/42 (57%)
Frame = +2
Query: 236 LNKSQGIDSKKSTTDDLKEFEKIKINTEKNKSISERVSIFKG 361
+NK++ + + K+ T L+ + K N+ +N ++E + F G
Sbjct: 242 VNKARSVSNAKAPTSALRALLEHKENSSQNGPLAENFATFSG 283
>SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 27.1 bits (57), Expect = 3.7
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = +2
Query: 236 LNKSQGIDSKKSTTDDLKEFEKIKINTEKNKSISERVSIFKGDITKLEIDAIVNAANSRL 415
L KS G K S K ++ + + E+N+ + V + + ITKLE + V ++
Sbjct: 355 LEKSIGDTLKSSIRSSPKSKKRSREDFEENEDYNAMVPVKRSRITKLESE--VYYEKRKV 412
Query: 416 KAGGGV 433
+A GG+
Sbjct: 413 RALGGI 418
>SPAC1039.04 |||nicotinic acid plasma membrane transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +2
Query: 254 IDSKKSTTDDLKEFEKIKINTEKNKSISERVSIFKGDIT 370
+++ TD+ K K++I + + +ISE++S FK +T
Sbjct: 245 VETANFLTDEEKTLAKMRIENDSSSAISEKLS-FKQSLT 282
>SPBC14C8.01c |cut2|SPBC1815.02c|securin|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 301
Score = 26.6 bits (56), Expect = 4.9
Identities = 9/34 (26%), Positives = 17/34 (50%)
Frame = +2
Query: 200 IDLENVDPWSKYLNKSQGIDSKKSTTDDLKEFEK 301
ID E +DPW NK+ + + + D +++
Sbjct: 150 IDCETLDPWPSMQNKATSVTIRNTPASDFHVYKE 183
>SPBC354.01 |gtp1|SPBC649.06|GTP binding protein
Gtp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 363
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = +2
Query: 278 DDLKEFEKIKINTEKNKSISERVSIFKGDITKLEIDAIVNAANSRLKAGG 427
+ ++E E T+KNK+ + + KG + KL + + S K G
Sbjct: 5 EKIQEIEAEMRRTQKNKATEYHLGLLKGKLAKLRAQLLEPTSKSGPKGEG 54
>SPCC645.02 |||conserved protein |Schizosaccharomyces pombe|chr
3|||Manual
Length = 188
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 695 IRKTRKFQWIYTEKRSILFGIPVGT 621
++K R+FQ IY EK IL +GT
Sbjct: 75 LKKIREFQNIYGEKNVILLSNSIGT 99
>SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint component
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 809
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/41 (29%), Positives = 27/41 (65%)
Frame = +2
Query: 254 IDSKKSTTDDLKEFEKIKINTEKNKSISERVSIFKGDITKL 376
++S K ++L+E ++K+ E+N S+ +++S KG++ L
Sbjct: 652 LESLKRENEELRE--QLKVEHEENISMQKQLSELKGELNTL 690
>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1427
Score = 26.2 bits (55), Expect = 6.5
Identities = 15/57 (26%), Positives = 30/57 (52%)
Frame = -2
Query: 219 STFSKSMKSEDL*IFLFSSNESLRILFFSISHLVELTIVATGKTXEFVLEYISQPKT 49
S F+K+ + + L S ++ ++ F +S LV T+ T + +L+Y+ PK+
Sbjct: 240 SRFAKNDRKSLMHTILLSLKSTILLMVF-LSVLVSSTLFVTPLAIKKLLQYLQNPKS 295
>SPAC17G8.13c |mst2||histone acetyltransferase
Mst2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 407
Score = 26.2 bits (55), Expect = 6.5
Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +2
Query: 101 ATMVNSTKWEIEKNRILKLSLEEKRKIYKSSDFIDLENVDPWSKYLNKSQGIDS-KKSTT 277
AT++ ST + I+K R + ++L + + L K Q S +
Sbjct: 3 ATILKSTA-SSKTLLIIKFDTNSSRYPFYKKHLLELNSESTFLGLLTKGQADTSITRLNQ 61
Query: 278 DDLKEFEKIKINTEKNKSIS 337
DD++ FEK K ++ K ++
Sbjct: 62 DDVRLFEKAKTVADRTKDVA 81
>SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 665
Score = 26.2 bits (55), Expect = 6.5
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 191 SDFIDLENVDPWSKYLNKSQG 253
S F DLE+ D S+YLN++ G
Sbjct: 579 SGFDDLEDTDSTSQYLNENSG 599
>SPAC23D3.06c |nup146||nucleoporin Nup146|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1325
Score = 26.2 bits (55), Expect = 6.5
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 203 DLENVDPWSKYLNKSQGIDSKKSTTDDLKEFEKIKINTE 319
D+ + S + K+ GIDSKKS T + E + I+ E
Sbjct: 875 DVSDTSDRSPFSFKAFGIDSKKSPTPEPTEMAESNISEE 913
>SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subunit a
Pol2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 2199
Score = 25.8 bits (54), Expect = 8.6
Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 5/112 (4%)
Frame = +2
Query: 125 WEIEKNRILKLSLEEKRKIYKSSDFIDLENVDPWSKYLNKSQGIDSKKSTTDD--LKEFE 298
W I +NR+ + RK + L NV+ + KS I ST+D L E
Sbjct: 1314 WVIIRNRLTSIRFIVNRKFFVCFKDETLPNVEIEGCLIEKSNAILPHGSTSDKLFLLEIP 1373
Query: 299 KIKINTEK--NKSISERVSIFKGDITKLE-IDAIVNAANSRLKAGGGVDGAI 445
+ TEK I S+ T++E I+ ++ SR + V GA+
Sbjct: 1374 EKSYLTEKVSISMIFAHPSVSGIYETRIEPIERLILEMGSRKRFNNSVPGAL 1425
>SPAC23D3.03c |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 472
Score = 25.8 bits (54), Expect = 8.6
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +2
Query: 230 KYLNKSQGIDSKKSTTDDLKEFEKIKINTEKNKSISERVSIFKGDITKLEIDAI 391
K++ + + I D K+ EKIK+ +KNK V++++ +I + DA+
Sbjct: 150 KHMREFEQIKKSAMRYDRQKQKEKIKMVEQKNKRNLYLVNVWEREILRNWPDAL 203
>SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1008
Score = 25.8 bits (54), Expect = 8.6
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = +2
Query: 194 DFIDLENVDPWSKYLNKSQGIDSKKSTTDDLKEFEKIKINTEKN 325
D D NVD + + +D STT+ K EK+ N N
Sbjct: 169 DMNDKINVDEAAAKSDSKLNVDQINSTTESEKRVEKVNPNIANN 212
>SPCC594.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 489
Score = 25.8 bits (54), Expect = 8.6
Identities = 26/120 (21%), Positives = 49/120 (40%), Gaps = 4/120 (3%)
Frame = +2
Query: 218 DPWSKYLNKSQGIDSKKSTTDDLKEFEKIKINTEKNKSISERVSIFKGDITKLEIDAIVN 397
D W KY + + K ++ DL + + ++ SI+E ++ +I I ++
Sbjct: 9 DYWKKYFSNKKKPTVKNTSDIDLLHINRGRQPFDEGLSINEDSFFYRHNIHVPRIVYLII 68
Query: 398 AANSRLKAGGGVDGAIHRAAGPFLQAECD----SIGGCPTGDAKVTGGYNLPAKYIIHTV 565
A GG++ AI A G + + E + +GDA VT Y + ++
Sbjct: 69 VACGSFIITGGIEFAI--AYGMYKKTETSVRLWRLPDTLSGDAAVTNFVQAIVTYWVESI 126
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,132,956
Number of Sequences: 5004
Number of extensions: 65728
Number of successful extensions: 264
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 264
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 464508080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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