Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_E24
(916 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73102-4|CAA97408.1| 203|Caenorhabditis elegans Hypothetical pr... 146 3e-35
Z54216-2|CAA90945.1| 242|Caenorhabditis elegans Hypothetical pr... 35 0.071
AF003390-4|AAB54273.1| 1165|Caenorhabditis elegans Hypothetical ... 33 0.38
Z54238-8|CAA90998.3| 459|Caenorhabditis elegans Hypothetical pr... 32 0.66
Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical pr... 31 1.5
L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein. 31 1.5
Z81537-2|CAB04373.1| 682|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z79757-1|CAB60999.1| 299|Caenorhabditis elegans Hypothetical pr... 29 3.5
AF026056-1|AAB81844.1| 298|Caenorhabditis elegans NK-2 class ho... 29 3.5
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ... 29 4.6
U97007-5|AAB52295.1| 564|Caenorhabditis elegans Hypothetical pr... 29 6.1
AF045644-3|AAC02602.2| 205|Caenorhabditis elegans Hypothetical ... 29 6.1
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 29 6.1
Z36719-1|CAA85311.2| 576|Caenorhabditis elegans Hypothetical pr... 28 8.1
U80845-1|AAK39181.1| 1217|Caenorhabditis elegans Prion-like-(q/n... 28 8.1
>Z73102-4|CAA97408.1| 203|Caenorhabditis elegans Hypothetical
protein B0035.3 protein.
Length = 203
Score = 146 bits (353), Expect = 3e-35
Identities = 83/170 (48%), Positives = 100/170 (58%), Gaps = 8/170 (4%)
Frame = +2
Query: 293 FEKIKINTEKNKSISERVSIFKGDITKLEIDAIVNAANSRLKAGGGVDGAIHRAAG-PFL 469
FEK K+ K++ R+S++ GDITKL +DAIVNAANSRL GGGVDGAIHRAAG L
Sbjct: 13 FEKFKVA----KNVLGRISVWDGDITKLSVDAIVNAANSRLAGGGGVDGAIHRAAGRKQL 68
Query: 470 QAECDSIGGCPTGDAKVTGGYNL-PAKYIIHTVGPQ------DGSAEKLESCYEKCLSYQ 628
Q EC GC GDA +T G N+ K IIHTVGPQ D E L +CY L
Sbjct: 69 QEECQQYNGCAVGDAVITSGCNINHIKKIIHTVGPQVYGNVTDERRENLVACYRTSLDIA 128
Query: 629 QEYQIKSIAFPCISTGIYGFSESSCSTHSATYS*EVLXTNTEMNRIIFCT 778
E +KSIAF CISTG+YG+ + + E L N + RI+ T
Sbjct: 129 IENGMKSIAFCCISTGVYGYPNDDAAKTVTNFLTEYLEKNDTIERIVLVT 178
>Z54216-2|CAA90945.1| 242|Caenorhabditis elegans Hypothetical
protein T24H10.3 protein.
Length = 242
Score = 35.1 bits (77), Expect = 0.071
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Frame = +2
Query: 116 STKWEIEKNRILKLSLEEKRKIYKSSDFIDLENVDPWSKYLNKSQGIDSKKSTTDDLKEF 295
+TK+++ LS EEKRKIY + +D + ++ K+ + KK T +D+ F
Sbjct: 57 TTKFQLLNKAYQILSDEEKRKIYDETGSVD-DEAGELNEDALKAWRMIFKKVTKEDIDSF 115
Query: 296 EK-IKINTEKNKSISERVSIFKGDITKLEIDAI 391
K + + E+ + F GDI K+ AI
Sbjct: 116 MKTYQGSREQKDELVVHYEKFNGDIAKIREYAI 148
>AF003390-4|AAB54273.1| 1165|Caenorhabditis elegans Hypothetical
protein R155.3 protein.
Length = 1165
Score = 32.7 bits (71), Expect = 0.38
Identities = 27/93 (29%), Positives = 50/93 (53%), Gaps = 15/93 (16%)
Frame = +2
Query: 227 SKYLNKSQGIDSKKSTTDDLKEFEKIKINTE----KNKSIS--ERVSIFK-----GDITK 373
+ Y+N + +K + TD LK+FEKI +++ + IS +++ FK GD+ K
Sbjct: 433 TSYINSVK--KTKHAETDALKDFEKIGLHSRVIGTATRGISNMQKLVDFKDLADIGDLVK 490
Query: 374 LEIDAIVNAAN----SRLKAGGGVDGAIHRAAG 460
E++ + + N + LKA G++G + A+G
Sbjct: 491 SEVEKVKDQLNDENVANLKALAGIEGQLKTASG 523
>Z54238-8|CAA90998.3| 459|Caenorhabditis elegans Hypothetical
protein T28C6.7 protein.
Length = 459
Score = 31.9 bits (69), Expect = 0.66
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Frame = +2
Query: 98 VATMVNSTKWEIEKNRILKLSLEE-KRKIYKSSDFIDLENVDPWSKYLNKSQGIDSKKST 274
V T+ +S WEIE+N +L+ + K K++K + +D V S + +
Sbjct: 288 VDTLRSSRNWEIEQNALLRDQVAHLKEKVHKLTTELDASEVAKRSLSSEVDESKKLMELM 347
Query: 275 TDDLKEFEK-IKINTEKNKSISERVSIFKGDI 367
+DL + E I N + K+I E + K I
Sbjct: 348 VEDLLQAESAINYNQCQKKAIFEDIDRLKDAI 379
>Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical
protein T01G9.5b protein.
Length = 475
Score = 30.7 bits (66), Expect = 1.5
Identities = 27/107 (25%), Positives = 48/107 (44%)
Frame = +2
Query: 65 IYSSTNSXVFPVATMVNSTKWEIEKNRILKLSLEEKRKIYKSSDFIDLENVDPWSKYLNK 244
I S ++S F V++ S+KW + +I++L E R S FID +D L
Sbjct: 246 IASESSSTFFTVSSTDLSSKWRGDSEKIVRLLFELARFYAPSIIFID--EIDT----LGG 299
Query: 245 SQGIDSKKSTTDDLKEFEKIKINTEKNKSISERVSIFKGDITKLEID 385
+G + + +K ++++ +NK S RV + E+D
Sbjct: 300 QRGNSGEHEASRRVKSEFLVQMDGSQNKFDSRRVFVLAATNIPWELD 346
>Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical
protein T01G9.5a protein.
Length = 472
Score = 30.7 bits (66), Expect = 1.5
Identities = 27/107 (25%), Positives = 48/107 (44%)
Frame = +2
Query: 65 IYSSTNSXVFPVATMVNSTKWEIEKNRILKLSLEEKRKIYKSSDFIDLENVDPWSKYLNK 244
I S ++S F V++ S+KW + +I++L E R S FID +D L
Sbjct: 246 IASESSSTFFTVSSTDLSSKWRGDSEKIVRLLFELARFYAPSIIFID--EIDT----LGG 299
Query: 245 SQGIDSKKSTTDDLKEFEKIKINTEKNKSISERVSIFKGDITKLEID 385
+G + + +K ++++ +NK S RV + E+D
Sbjct: 300 QRGNSGEHEASRRVKSEFLVQMDGSQNKFDSRRVFVLAATNIPWELD 346
>L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein.
Length = 472
Score = 30.7 bits (66), Expect = 1.5
Identities = 27/107 (25%), Positives = 48/107 (44%)
Frame = +2
Query: 65 IYSSTNSXVFPVATMVNSTKWEIEKNRILKLSLEEKRKIYKSSDFIDLENVDPWSKYLNK 244
I S ++S F V++ S+KW + +I++L E R S FID +D L
Sbjct: 246 IASESSSTFFTVSSTDLSSKWRGDSEKIVRLLFELARFYAPSIIFID--EIDT----LGG 299
Query: 245 SQGIDSKKSTTDDLKEFEKIKINTEKNKSISERVSIFKGDITKLEID 385
+G + + +K ++++ +NK S RV + E+D
Sbjct: 300 QRGNSGEHEASRRVKSEFLVQMDGSQNKFDSRRVFVLAATNIPWELD 346
>Z81537-2|CAB04373.1| 682|Caenorhabditis elegans Hypothetical
protein F41D3.2 protein.
Length = 682
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = +2
Query: 98 VATMVNSTKWEIEKNRILKLSLEEKRKIYKSSDF--IDLENVDPWSKYL 238
V T+ + +++ K +ILKLS K KIY + F ID +V+ +K+L
Sbjct: 537 VTTLEQDSVYQVMKQQILKLSENVKYKIYIMNAFPRIDQPSVEMIAKWL 585
>Z79757-1|CAB60999.1| 299|Caenorhabditis elegans Hypothetical
protein F55B12.1 protein.
Length = 299
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 230 KYLNKSQGIDSKKSTTDDLKEFEKIKINTEK 322
K N+ GID +KS+ DD + K+K N K
Sbjct: 15 KEKNEETGIDEEKSSEDDCSKRSKVKSNPSK 45
>AF026056-1|AAB81844.1| 298|Caenorhabditis elegans NK-2 class
homeodomain protein protein.
Length = 298
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 230 KYLNKSQGIDSKKSTTDDLKEFEKIKINTEK 322
K N+ GID +KS+ DD + K+K N K
Sbjct: 15 KEKNEETGIDEEKSSEDDCSKRSKVKSNPSK 45
>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
protein C08G9.2 protein.
Length = 2224
Score = 29.1 bits (62), Expect = 4.6
Identities = 28/117 (23%), Positives = 49/117 (41%), Gaps = 1/117 (0%)
Frame = +2
Query: 458 GPFLQAECDS-IGGCPTGDAKVTGGYNLPAKYIIHTVGPQDGSAEKLESCYEKCLSYQQE 634
G F + +CD+ + C D K TG + + + T+G Q +SC +C+ +
Sbjct: 1504 GLFRKYQCDARLNQCWCVD-KATGVEEIGTR--LFTIGLQSPDCNLPKSCPTQCIGSRCP 1560
Query: 635 YQIKSIAFPCISTGIYGFSESSCSTHSATYS*EVLXTNTEMNRIIFCTSTSCXXLSY 805
Y I++ C + G+ + CST + + E E CTS C + +
Sbjct: 1561 YGIRTDGSGCPANGVCE-CINICSTFNCPQNMECALRRVE------CTSNPCPDVPF 1610
>U97007-5|AAB52295.1| 564|Caenorhabditis elegans Hypothetical
protein ZC196.5 protein.
Length = 564
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +2
Query: 149 LKLSLEEKRKIYKSSDFIDLENVDPWSKYLNKSQGIDSKKSTTDDLKEFEKIKINTEKNK 328
++++ + K K K++ +D D W Y S + D L+E K+K ++
Sbjct: 271 MEITKQRKSKAVKNNQELD----DDWGAYTTSSNAEEKISKKCDSLQEPVKLKRTESESS 326
Query: 329 SISE 340
SI+E
Sbjct: 327 SITE 330
>AF045644-3|AAC02602.2| 205|Caenorhabditis elegans Hypothetical
protein F57H12.6 protein.
Length = 205
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 221 PWSKYLNKSQGIDSKKSTTDDLKEFEKIKINTEK-NKSISER 343
PWS+ K + + K+ D+LK+F++ K EK +K E+
Sbjct: 108 PWSEKPEKIEALAEKELDGDNLKKFKEFKEKKEKEDKEYKEK 149
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 101 ATMVNSTKWEIEKNRILKLSLEEKRKIYKSSDFIDLENVDPWSKYLNK 244
ATM+N +E +++ E+ RK +SS IDL+ + +K L K
Sbjct: 8340 ATMLNDAIAHLENQKVVVARSEKDRKFVESSTSIDLDQLLAEAKRLLK 8387
>Z36719-1|CAA85311.2| 576|Caenorhabditis elegans Hypothetical
protein C06C3.3 protein.
Length = 576
Score = 28.3 bits (60), Expect = 8.1
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Frame = +2
Query: 128 EIEKNRILKLSLEEKRKIYKSSDFIDLENVDPWSKYLNKSQGIDSKKSTTDDLKEFEKI- 304
+IEK KLS +K + KS + + D + L + + I+ K EK+
Sbjct: 397 KIEKKVPEKLSKPQKTETTKSKE--RAKWADQGNTTLKREKSIEKSTRQGKIDKSIEKLI 454
Query: 305 --KI-NTEKNKSISERVSIFKGDITKLEID 385
I NTEK S ++ + KG++ K ++D
Sbjct: 455 DKSIDNTEKLSSQKPKIDMAKGELRKFDVD 484
>U80845-1|AAK39181.1| 1217|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 15
protein.
Length = 1217
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 455 AGPFLQAECDSIGGCPTGDAKVTGGYNLP 541
AGP +Q + GG P KVT G N+P
Sbjct: 1126 AGPMIQQGKNIAGGYPPNQNKVTPGKNVP 1154
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,272,029
Number of Sequences: 27780
Number of extensions: 371829
Number of successful extensions: 1260
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1256
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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