Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_E16
(1068 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage f... 37 0.11
X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein. 37 0.11
BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein. 37 0.11
BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein. 37 0.11
AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and polyadenyl... 37 0.11
BC096212-1|AAH96212.1| 162|Homo sapiens PRB3 protein protein. 33 1.8
AB209373-1|BAD92610.1| 410|Homo sapiens CS0DA006YC23 variant pr... 33 1.8
AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein. 32 3.1
BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongatio... 31 5.4
AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription ... 31 5.4
AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongatio... 31 5.4
EF695445-1|ABS01483.1| 231|Homo sapiens extraembryonic spermato... 31 7.2
EF695438-1|ABS01476.1| 222|Homo sapiens extraembryonic spermato... 31 7.2
EF695434-1|ABS01472.1| 222|Homo sapiens extraembryonic spermato... 31 7.2
EF695433-1|ABS01471.1| 222|Homo sapiens extraembryonic spermato... 31 7.2
EF695432-1|ABS01470.1| 222|Homo sapiens extraembryonic spermato... 31 7.2
EF695430-1|ABS01468.1| 222|Homo sapiens extraembryonic spermato... 31 7.2
EF695429-1|ABS01467.1| 222|Homo sapiens extraembryonic spermato... 31 7.2
EF695428-1|ABS01466.1| 222|Homo sapiens extraembryonic spermato... 31 7.2
EF695427-1|ABS01465.1| 222|Homo sapiens extraembryonic spermato... 31 7.2
EF695415-1|ABS01453.1| 231|Homo sapiens extraembryonic spermato... 31 7.2
AY453840-1|AAR24087.1| 538|Homo sapiens atherin protein. 31 7.2
Y00970-1|CAA68784.1| 421|Homo sapiens protein ( Human mRNA for ... 31 9.5
X86019-1|CAA60014.1| 494|Homo sapiens SH3-domain interacting pr... 31 9.5
X66188-1|CAA46956.1| 421|Homo sapiens proacrosin protein. 31 9.5
X54017-1|CAA37964.1| 421|Homo sapiens preproacrosin protein. 31 9.5
M77381-1|AAA51575.1| 184|Homo sapiens acrosin protein. 31 9.5
CR456366-1|CAG30252.1| 421|Homo sapiens ACR protein. 31 9.5
BC040516-1|AAH40516.1| 859|Homo sapiens SGIP1 protein protein. 31 9.5
BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetit... 31 9.5
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 31 9.5
AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 31 9.5
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 31 9.5
AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 31 9.5
AL356913-3|CAI22673.1| 631|Homo sapiens SH3-domain GRB2-like (e... 31 9.5
AL356913-2|CAI22674.1| 828|Homo sapiens SH3-domain GRB2-like (e... 31 9.5
AL356913-1|CAI22672.1| 859|Homo sapiens SH3-domain GRB2-like (e... 31 9.5
AL354978-7|CAH71847.1| 631|Homo sapiens SH3-domain GRB2-like (e... 31 9.5
AL354978-6|CAH71846.1| 828|Homo sapiens SH3-domain GRB2-like (e... 31 9.5
AL354978-5|CAH71845.1| 859|Homo sapiens SH3-domain GRB2-like (e... 31 9.5
AL139147-4|CAI21944.1| 631|Homo sapiens SH3-domain GRB2-like (e... 31 9.5
AL139147-3|CAI21943.1| 828|Homo sapiens SH3-domain GRB2-like (e... 31 9.5
AL139147-2|CAI21942.1| 859|Homo sapiens SH3-domain GRB2-like (e... 31 9.5
AL078621-10|CAB81647.1| 232|Homo sapiens protein ( G islands. ... 31 9.5
AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 31 9.5
AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 31 9.5
AF031588-1|AAC03767.1| 503|Homo sapiens WASP interacting protei... 31 9.5
AF010404-1|AAC51735.1| 4957|Homo sapiens ALR protein. 31 9.5
AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein. 31 9.5
AB210039-1|BAE06121.1| 856|Homo sapiens DKFZp761D221 variant pr... 31 9.5
AB209494-1|BAD92731.1| 2704|Homo sapiens myeloid/lymphoid or mix... 31 9.5
>X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage
factor I 68 kDa subunit protein.
Length = 551
Score = 37.1 bits (82), Expect = 0.11
Identities = 21/70 (30%), Positives = 22/70 (31%)
Frame = +3
Query: 348 GPXXPXPPPXXXGVXXGMXPPXXRXXPTPXTXXXXPXPXGXAKEXGXXXRXXSPPQXATG 527
GP P PPP G PP + P P P P G P G
Sbjct: 290 GPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPG 349
Query: 528 VPXPAPXRXP 557
P PAP P
Sbjct: 350 APPPAPHVNP 359
>X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein.
Length = 551
Score = 37.1 bits (82), Expect = 0.11
Identities = 21/70 (30%), Positives = 22/70 (31%)
Frame = +3
Query: 348 GPXXPXPPPXXXGVXXGMXPPXXRXXPTPXTXXXXPXPXGXAKEXGXXXRXXSPPQXATG 527
GP P PPP G PP + P P P P G P G
Sbjct: 290 GPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPG 349
Query: 528 VPXPAPXRXP 557
P PAP P
Sbjct: 350 APPPAPHVNP 359
>BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein.
Length = 478
Score = 37.1 bits (82), Expect = 0.11
Identities = 21/70 (30%), Positives = 22/70 (31%)
Frame = +3
Query: 348 GPXXPXPPPXXXGVXXGMXPPXXRXXPTPXTXXXXPXPXGXAKEXGXXXRXXSPPQXATG 527
GP P PPP G PP + P P P P G P G
Sbjct: 217 GPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPG 276
Query: 528 VPXPAPXRXP 557
P PAP P
Sbjct: 277 APPPAPHVNP 286
>BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein.
Length = 588
Score = 37.1 bits (82), Expect = 0.11
Identities = 21/70 (30%), Positives = 22/70 (31%)
Frame = +3
Query: 348 GPXXPXPPPXXXGVXXGMXPPXXRXXPTPXTXXXXPXPXGXAKEXGXXXRXXSPPQXATG 527
GP P PPP G PP + P P P P G P G
Sbjct: 327 GPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPG 386
Query: 528 VPXPAPXRXP 557
P PAP P
Sbjct: 387 APPPAPHVNP 396
>AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and
polyadenylation specific factor 6, 68 kD subunit variant
protein.
Length = 551
Score = 37.1 bits (82), Expect = 0.11
Identities = 21/70 (30%), Positives = 22/70 (31%)
Frame = +3
Query: 348 GPXXPXPPPXXXGVXXGMXPPXXRXXPTPXTXXXXPXPXGXAKEXGXXXRXXSPPQXATG 527
GP P PPP G PP + P P P P G P G
Sbjct: 290 GPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPG 349
Query: 528 VPXPAPXRXP 557
P PAP P
Sbjct: 350 APPPAPHVNP 359
>BC096212-1|AAH96212.1| 162|Homo sapiens PRB3 protein protein.
Length = 162
Score = 33.1 bits (72), Expect = 1.8
Identities = 23/88 (26%), Positives = 25/88 (28%), Gaps = 6/88 (6%)
Frame = +1
Query: 361 RXPXPPXXASXRAXXLXRXEXXQPXKPXXXXPXPPXPPRKXAXPXGXRARPXXPP----- 525
R P PP R P +P PP K P +P PP
Sbjct: 49 RTPPPPGKPEGRPPQGGNQSQGPPPRPGKPEGQPPQGGNKPQGPPPHPGKPQGPPPQEGN 108
Query: 526 -EXRXPPPXAPXXXXXLXGXPXXXWPXP 606
R PPP P G P P P
Sbjct: 109 KPQRPPPPGRPQGPPPPGGNPQQPLPPP 136
>AB209373-1|BAD92610.1| 410|Homo sapiens CS0DA006YC23 variant
protein.
Length = 410
Score = 33.1 bits (72), Expect = 1.8
Identities = 24/81 (29%), Positives = 25/81 (30%), Gaps = 1/81 (1%)
Frame = +1
Query: 367 PXPPXXASXRAXXLXRXEXXQPXKPXXXXPX-PPXPPRKXAXPXGXRARPXXPPEXRXPP 543
P PP AS + P P P PP PPR P P PP PP
Sbjct: 316 PVPPPPASFPPPAIPPPTPGYPPPPPTYNPNFPPPPPR---LPPTHAVPPHPPPGLGLPP 372
Query: 544 PXAPXXXXXLXGXPXXXWPXP 606
P G P P P
Sbjct: 373 ASYPPPAVPPGGQPPVPPPIP 393
>AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein.
Length = 1134
Score = 32.3 bits (70), Expect = 3.1
Identities = 22/82 (26%), Positives = 23/82 (28%)
Frame = +1
Query: 373 PPXXASXRAXXLXRXEXXQPXKPXXXXPXPPXPPRKXAXPXGXRARPXXPPEXRXPPPXA 552
P + RA P P P PP P R P RP PP PP
Sbjct: 946 PALPSEARAPPPPPPPPPHPPLPPPPLPPPPLPLRLPPLPPPPLPRPHPPPPPPLPPLLP 1005
Query: 553 PXXXXXLXGXPXXXWPXPXXXA 618
P L P P A
Sbjct: 1006 PPQTRTLPAARTMRQPPPPRLA 1027
>BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongation
regulator 1 protein.
Length = 1077
Score = 31.5 bits (68), Expect = 5.4
Identities = 21/66 (31%), Positives = 22/66 (33%), Gaps = 1/66 (1%)
Frame = +1
Query: 361 RXPXPPXXASXRAXXLXRXEXXQPXKPXXXXPXPPXPPRKX-AXPXGXRARPXXPPEXRX 537
R P PP A R +P P PP PPR P P PP
Sbjct: 30 RGPAPPPNAVMRGPP----PLMRPPPPFGMMRGPPPPPRPPFGRPPFDPNMPPMPPPGGI 85
Query: 538 PPPXAP 555
PPP P
Sbjct: 86 PPPMGP 91
>AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription
factor CA150 protein.
Length = 1098
Score = 31.5 bits (68), Expect = 5.4
Identities = 21/66 (31%), Positives = 22/66 (33%), Gaps = 1/66 (1%)
Frame = +1
Query: 361 RXPXPPXXASXRAXXLXRXEXXQPXKPXXXXPXPPXPPRKX-AXPXGXRARPXXPPEXRX 537
R P PP A R +P P PP PPR P P PP
Sbjct: 30 RGPAPPPNAVMRGPP----PLMRPPPPFGMMRGPPPPPRPPFGRPPFDPNMPPMPPPGGI 85
Query: 538 PPPXAP 555
PPP P
Sbjct: 86 PPPMGP 91
>AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongation
regulator 1 variant protein.
Length = 1081
Score = 31.5 bits (68), Expect = 5.4
Identities = 21/66 (31%), Positives = 22/66 (33%), Gaps = 1/66 (1%)
Frame = +1
Query: 361 RXPXPPXXASXRAXXLXRXEXXQPXKPXXXXPXPPXPPRKX-AXPXGXRARPXXPPEXRX 537
R P PP A R +P P PP PPR P P PP
Sbjct: 34 RGPAPPPNAVMRGPP----PLMRPPPPFGMMRGPPPPPRPPFGRPPFDPNMPPMPPPGGI 89
Query: 538 PPPXAP 555
PPP P
Sbjct: 90 PPPMGP 95
>EF695445-1|ABS01483.1| 231|Homo sapiens extraembryonic
spermatogenesis homeobox 1-like protein protein.
Length = 231
Score = 31.1 bits (67), Expect = 7.2
Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Frame = +1
Query: 454 PXPPXPPRKXAXPXGXRAR-PXXPPEXRXP--PPXAP 555
P PP PP P AR P PP R P PP AP
Sbjct: 136 PVPPGPPMARVPPGPPMARVPPGPPMARVPPGPPMAP 172
>EF695438-1|ABS01476.1| 222|Homo sapiens extraembryonic
spermatogenesis homeobox 1-like protein protein.
Length = 222
Score = 31.1 bits (67), Expect = 7.2
Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Frame = +1
Query: 454 PXPPXPPRKXAXPXGXRAR-PXXPPEXRXP--PPXAP 555
P PP PP P AR P PP R P PP AP
Sbjct: 136 PVPPGPPMARVPPGPPMARVPPGPPMARVPPGPPMAP 172
>EF695434-1|ABS01472.1| 222|Homo sapiens extraembryonic
spermatogenesis homeobox 1-like protein protein.
Length = 222
Score = 31.1 bits (67), Expect = 7.2
Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Frame = +1
Query: 454 PXPPXPPRKXAXPXGXRAR-PXXPPEXRXP--PPXAP 555
P PP PP P AR P PP R P PP AP
Sbjct: 136 PVPPGPPMARVPPGPPMARVPPGPPMARVPPGPPMAP 172
>EF695433-1|ABS01471.1| 222|Homo sapiens extraembryonic
spermatogenesis homeobox 1-like protein protein.
Length = 222
Score = 31.1 bits (67), Expect = 7.2
Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Frame = +1
Query: 454 PXPPXPPRKXAXPXGXRAR-PXXPPEXRXP--PPXAP 555
P PP PP P AR P PP R P PP AP
Sbjct: 127 PVPPGPPMARVPPGPPMARVPPGPPMARVPPGPPMAP 163
>EF695432-1|ABS01470.1| 222|Homo sapiens extraembryonic
spermatogenesis homeobox 1-like protein protein.
Length = 222
Score = 31.1 bits (67), Expect = 7.2
Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Frame = +1
Query: 454 PXPPXPPRKXAXPXGXRAR-PXXPPEXRXP--PPXAP 555
P PP PP P AR P PP R P PP AP
Sbjct: 136 PVPPGPPMARVPPGPPMARVPPGPPMARVPPGPPMAP 172
>EF695430-1|ABS01468.1| 222|Homo sapiens extraembryonic
spermatogenesis homeobox 1-like protein protein.
Length = 222
Score = 31.1 bits (67), Expect = 7.2
Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Frame = +1
Query: 454 PXPPXPPRKXAXPXGXRAR-PXXPPEXRXP--PPXAP 555
P PP PP P AR P PP R P PP AP
Sbjct: 136 PVPPGPPMARVPPGPPMARVPPGPPMARVPPGPPMAP 172
>EF695429-1|ABS01467.1| 222|Homo sapiens extraembryonic
spermatogenesis homeobox 1-like protein protein.
Length = 222
Score = 31.1 bits (67), Expect = 7.2
Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Frame = +1
Query: 454 PXPPXPPRKXAXPXGXRAR-PXXPPEXRXP--PPXAP 555
P PP PP P AR P PP R P PP AP
Sbjct: 136 PVPPGPPMARVPPGPPMARVPPGPPMARVPPGPPMAP 172
>EF695428-1|ABS01466.1| 222|Homo sapiens extraembryonic
spermatogenesis homeobox 1-like protein protein.
Length = 222
Score = 31.1 bits (67), Expect = 7.2
Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Frame = +1
Query: 454 PXPPXPPRKXAXPXGXRAR-PXXPPEXRXP--PPXAP 555
P PP PP P AR P PP R P PP AP
Sbjct: 136 PVPPGPPMARVPPGPPMARVPPGPPMARVPPGPPMAP 172
>EF695427-1|ABS01465.1| 222|Homo sapiens extraembryonic
spermatogenesis homeobox 1-like protein protein.
Length = 222
Score = 31.1 bits (67), Expect = 7.2
Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Frame = +1
Query: 454 PXPPXPPRKXAXPXGXRAR-PXXPPEXRXP--PPXAP 555
P PP PP P AR P PP R P PP AP
Sbjct: 136 PVPPGPPMARVPPGPPMARVPPGPPMARVPPGPPMAP 172
>EF695415-1|ABS01453.1| 231|Homo sapiens extraembryonic
spermatogenesis homeobox 1-like protein protein.
Length = 231
Score = 31.1 bits (67), Expect = 7.2
Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Frame = +1
Query: 454 PXPPXPPRKXAXPXGXRAR-PXXPPEXRXP--PPXAP 555
P PP PP P AR P PP R P PP AP
Sbjct: 136 PVPPGPPMARVPPGPPMARVPPGPPMARVPPGPPMAP 172
>AY453840-1|AAR24087.1| 538|Homo sapiens atherin protein.
Length = 538
Score = 31.1 bits (67), Expect = 7.2
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +1
Query: 436 KPXXXXPXPPXPPRKXAXPXGXRARPXXPPEXRXPPPXAP 555
+P PP PPR A PP PPP AP
Sbjct: 100 QPPRRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAP 139
>Y00970-1|CAA68784.1| 421|Homo sapiens protein ( Human mRNA for
acrosin (EC 3.4.21.10). ).
Length = 421
Score = 30.7 bits (66), Expect = 9.5
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 454 PXPPXPPRKXAXPXGXRARPXXPPEXRXPPPXAP 555
P PP PP P P PP PPP P
Sbjct: 334 PLPPRPPAAQPRPPPSPPPPPPPPASPLPPPPPP 367
>X86019-1|CAA60014.1| 494|Homo sapiens SH3-domain interacting
protein protein.
Length = 494
Score = 30.7 bits (66), Expect = 9.5
Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Frame = +1
Query: 460 PPXPPRKXAXPXGXRARPXXP--PEXRXPPPXAP 555
PP PP+ P RP P P R PPP P
Sbjct: 283 PPPPPQNNKPPVPSTPRPSAPHRPHLRPPPPSRP 316
>X66188-1|CAA46956.1| 421|Homo sapiens proacrosin protein.
Length = 421
Score = 30.7 bits (66), Expect = 9.5
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 454 PXPPXPPRKXAXPXGXRARPXXPPEXRXPPPXAP 555
P PP PP P P PP PPP P
Sbjct: 334 PLPPRPPAAQPPPPPSPPPPPPPPASPLPPPPPP 367
>X54017-1|CAA37964.1| 421|Homo sapiens preproacrosin protein.
Length = 421
Score = 30.7 bits (66), Expect = 9.5
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 454 PXPPXPPRKXAXPXGXRARPXXPPEXRXPPPXAP 555
P PP PP P P PP PPP P
Sbjct: 334 PLPPRPPAAQPPPPPSPPPPPPPPASPLPPPPPP 367
>M77381-1|AAA51575.1| 184|Homo sapiens acrosin protein.
Length = 184
Score = 30.7 bits (66), Expect = 9.5
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 454 PXPPXPPRKXAXPXGXRARPXXPPEXRXPPPXAP 555
P PP PP P P PP PPP P
Sbjct: 97 PLPPRPPAAQPPPPPSPPPPPPPPASPLPPPPPP 130
>CR456366-1|CAG30252.1| 421|Homo sapiens ACR protein.
Length = 421
Score = 30.7 bits (66), Expect = 9.5
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 454 PXPPXPPRKXAXPXGXRARPXXPPEXRXPPPXAP 555
P PP PP P P PP PPP P
Sbjct: 334 PLPPRPPAAQPRPPPSPPPPPPPPASPLPPPPPP 367
>BC040516-1|AAH40516.1| 859|Homo sapiens SGIP1 protein protein.
Length = 859
Score = 30.7 bits (66), Expect = 9.5
Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 6/48 (12%)
Frame = +1
Query: 430 PXKPXXXXPXPPXPPRKXAXPXGXR-----ARPXXPP-EXRXPPPXAP 555
P + P PP PP + P G +RP PP PPP AP
Sbjct: 483 PCRSTTPPPPPPRPPSRPKLPPGKPGVGDVSRPFSPPIHSSSPPPIAP 530
>BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 30.7 bits (66), Expect = 9.5
Identities = 18/64 (28%), Positives = 21/64 (32%)
Frame = +3
Query: 360 PXPPPXXXGVXXGMXPPXXRXXPTPXTXXXXPXPXGXAKEXGXXXRXXSPPQXATGVPXP 539
P PPP PP R P+P P P + PP+ T P P
Sbjct: 563 PAPPPRRRRTPT---PPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPP 619
Query: 540 APXR 551
P R
Sbjct: 620 PPKR 623
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 30.7 bits (66), Expect = 9.5
Identities = 18/64 (28%), Positives = 21/64 (32%)
Frame = +3
Query: 360 PXPPPXXXGVXXGMXPPXXRXXPTPXTXXXXPXPXGXAKEXGXXXRXXSPPQXATGVPXP 539
P PPP PP R P+P P P + PP+ T P P
Sbjct: 563 PAPPPRRRRTPT---PPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPP 619
Query: 540 APXR 551
P R
Sbjct: 620 PPKR 623
>AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 30.7 bits (66), Expect = 9.5
Identities = 18/64 (28%), Positives = 21/64 (32%)
Frame = +3
Query: 360 PXPPPXXXGVXXGMXPPXXRXXPTPXTXXXXPXPXGXAKEXGXXXRXXSPPQXATGVPXP 539
P PPP PP R P+P P P + PP+ T P P
Sbjct: 572 PAPPPRRRRTPT---PPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPP 628
Query: 540 APXR 551
P R
Sbjct: 629 PPKR 632
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 30.7 bits (66), Expect = 9.5
Identities = 18/64 (28%), Positives = 21/64 (32%)
Frame = +3
Query: 360 PXPPPXXXGVXXGMXPPXXRXXPTPXTXXXXPXPXGXAKEXGXXXRXXSPPQXATGVPXP 539
P PPP PP R P+P P P + PP+ T P P
Sbjct: 563 PAPPPRRRRTPT---PPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPP 619
Query: 540 APXR 551
P R
Sbjct: 620 PPKR 623
>AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 30.7 bits (66), Expect = 9.5
Identities = 18/64 (28%), Positives = 21/64 (32%)
Frame = +3
Query: 360 PXPPPXXXGVXXGMXPPXXRXXPTPXTXXXXPXPXGXAKEXGXXXRXXSPPQXATGVPXP 539
P PPP PP R P+P P P + PP+ T P P
Sbjct: 572 PAPPPRRRRTPT---PPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPP 628
Query: 540 APXR 551
P R
Sbjct: 629 PPKR 632
>AL356913-3|CAI22673.1| 631|Homo sapiens SH3-domain GRB2-like
(endophilin) interacting protein 1 protein.
Length = 631
Score = 30.7 bits (66), Expect = 9.5
Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 6/48 (12%)
Frame = +1
Query: 430 PXKPXXXXPXPPXPPRKXAXPXGXR-----ARPXXPP-EXRXPPPXAP 555
P + P PP PP + P G +RP PP PPP AP
Sbjct: 253 PCRSTTPPPPPPRPPSRPKLPPGKPGVGDVSRPFSPPIHSSSPPPIAP 300
>AL356913-2|CAI22674.1| 828|Homo sapiens SH3-domain GRB2-like
(endophilin) interacting protein 1 protein.
Length = 828
Score = 30.7 bits (66), Expect = 9.5
Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 6/48 (12%)
Frame = +1
Query: 430 PXKPXXXXPXPPXPPRKXAXPXGXR-----ARPXXPP-EXRXPPPXAP 555
P + P PP PP + P G +RP PP PPP AP
Sbjct: 452 PCRSTTPPPPPPRPPSRPKLPPGKPGVGDVSRPFSPPIHSSSPPPIAP 499
>AL356913-1|CAI22672.1| 859|Homo sapiens SH3-domain GRB2-like
(endophilin) interacting protein 1 protein.
Length = 859
Score = 30.7 bits (66), Expect = 9.5
Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 6/48 (12%)
Frame = +1
Query: 430 PXKPXXXXPXPPXPPRKXAXPXGXR-----ARPXXPP-EXRXPPPXAP 555
P + P PP PP + P G +RP PP PPP AP
Sbjct: 483 PCRSTTPPPPPPRPPSRPKLPPGKPGVGDVSRPFSPPIHSSSPPPIAP 530
>AL354978-7|CAH71847.1| 631|Homo sapiens SH3-domain GRB2-like
(endophilin) interacting protein 1 protein.
Length = 631
Score = 30.7 bits (66), Expect = 9.5
Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 6/48 (12%)
Frame = +1
Query: 430 PXKPXXXXPXPPXPPRKXAXPXGXR-----ARPXXPP-EXRXPPPXAP 555
P + P PP PP + P G +RP PP PPP AP
Sbjct: 253 PCRSTTPPPPPPRPPSRPKLPPGKPGVGDVSRPFSPPIHSSSPPPIAP 300
>AL354978-6|CAH71846.1| 828|Homo sapiens SH3-domain GRB2-like
(endophilin) interacting protein 1 protein.
Length = 828
Score = 30.7 bits (66), Expect = 9.5
Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 6/48 (12%)
Frame = +1
Query: 430 PXKPXXXXPXPPXPPRKXAXPXGXR-----ARPXXPP-EXRXPPPXAP 555
P + P PP PP + P G +RP PP PPP AP
Sbjct: 452 PCRSTTPPPPPPRPPSRPKLPPGKPGVGDVSRPFSPPIHSSSPPPIAP 499
>AL354978-5|CAH71845.1| 859|Homo sapiens SH3-domain GRB2-like
(endophilin) interacting protein 1 protein.
Length = 859
Score = 30.7 bits (66), Expect = 9.5
Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 6/48 (12%)
Frame = +1
Query: 430 PXKPXXXXPXPPXPPRKXAXPXGXR-----ARPXXPP-EXRXPPPXAP 555
P + P PP PP + P G +RP PP PPP AP
Sbjct: 483 PCRSTTPPPPPPRPPSRPKLPPGKPGVGDVSRPFSPPIHSSSPPPIAP 530
>AL139147-4|CAI21944.1| 631|Homo sapiens SH3-domain GRB2-like
(endophilin) interacting protein 1 protein.
Length = 631
Score = 30.7 bits (66), Expect = 9.5
Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 6/48 (12%)
Frame = +1
Query: 430 PXKPXXXXPXPPXPPRKXAXPXGXR-----ARPXXPP-EXRXPPPXAP 555
P + P PP PP + P G +RP PP PPP AP
Sbjct: 253 PCRSTTPPPPPPRPPSRPKLPPGKPGVGDVSRPFSPPIHSSSPPPIAP 300
>AL139147-3|CAI21943.1| 828|Homo sapiens SH3-domain GRB2-like
(endophilin) interacting protein 1 protein.
Length = 828
Score = 30.7 bits (66), Expect = 9.5
Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 6/48 (12%)
Frame = +1
Query: 430 PXKPXXXXPXPPXPPRKXAXPXGXR-----ARPXXPP-EXRXPPPXAP 555
P + P PP PP + P G +RP PP PPP AP
Sbjct: 452 PCRSTTPPPPPPRPPSRPKLPPGKPGVGDVSRPFSPPIHSSSPPPIAP 499
>AL139147-2|CAI21942.1| 859|Homo sapiens SH3-domain GRB2-like
(endophilin) interacting protein 1 protein.
Length = 859
Score = 30.7 bits (66), Expect = 9.5
Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 6/48 (12%)
Frame = +1
Query: 430 PXKPXXXXPXPPXPPRKXAXPXGXR-----ARPXXPP-EXRXPPPXAP 555
P + P PP PP + P G +RP PP PPP AP
Sbjct: 483 PCRSTTPPPPPPRPPSRPKLPPGKPGVGDVSRPFSPPIHSSSPPPIAP 530
>AL078621-10|CAB81647.1| 232|Homo sapiens protein ( G islands.
).).
Length = 232
Score = 30.7 bits (66), Expect = 9.5
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 454 PXPPXPPRKXAXPXGXRARPXXPPEXRXPPPXAP 555
P PP PP P P PP PPP P
Sbjct: 145 PLPPRPPAAQPRPPPSPPPPPPPPPSPLPPPPPP 178
>AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 30.7 bits (66), Expect = 9.5
Identities = 18/64 (28%), Positives = 21/64 (32%)
Frame = +3
Query: 360 PXPPPXXXGVXXGMXPPXXRXXPTPXTXXXXPXPXGXAKEXGXXXRXXSPPQXATGVPXP 539
P PPP PP R P+P P P + PP+ T P P
Sbjct: 561 PAPPPRRRRTPT---PPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPP 617
Query: 540 APXR 551
P R
Sbjct: 618 PPKR 621
>AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 30.7 bits (66), Expect = 9.5
Identities = 18/64 (28%), Positives = 21/64 (32%)
Frame = +3
Query: 360 PXPPPXXXGVXXGMXPPXXRXXPTPXTXXXXPXPXGXAKEXGXXXRXXSPPQXATGVPXP 539
P PPP PP R P+P P P + PP+ T P P
Sbjct: 561 PAPPPRRRRTPT---PPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPP 617
Query: 540 APXR 551
P R
Sbjct: 618 PPKR 621
>AF031588-1|AAC03767.1| 503|Homo sapiens WASP interacting protein
protein.
Length = 503
Score = 30.7 bits (66), Expect = 9.5
Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Frame = +1
Query: 460 PPXPPRKXAXPXGXRARPXXP--PEXRXPPPXAP 555
PP PP+ P RP P P R PPP P
Sbjct: 283 PPPPPQNNKPPVPSTPRPSAPHRPHLRPPPPSRP 316
>AF010404-1|AAC51735.1| 4957|Homo sapiens ALR protein.
Length = 4957
Score = 30.7 bits (66), Expect = 9.5
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = +1
Query: 430 PXKPXXXXPXPPXPPRKXAXPXGXRARPXXPPEXRXPPPXAP 555
P + P P PPR A P P P PPP +P
Sbjct: 3693 PLQELGAGPRPQGPPRLPAPPGALSTGPVLGPVHPTPPPSSP 3734
>AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein.
Length = 5262
Score = 30.7 bits (66), Expect = 9.5
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = +1
Query: 430 PXKPXXXXPXPPXPPRKXAXPXGXRARPXXPPEXRXPPPXAP 555
P + P P PPR A P P P PPP +P
Sbjct: 3998 PLQELGAGPRPQGPPRLPAPPGALSTGPVLGPVHPTPPPSSP 4039
>AB210039-1|BAE06121.1| 856|Homo sapiens DKFZp761D221 variant
protein protein.
Length = 856
Score = 30.7 bits (66), Expect = 9.5
Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 6/48 (12%)
Frame = +1
Query: 430 PXKPXXXXPXPPXPPRKXAXPXGXR-----ARPXXPP-EXRXPPPXAP 555
P + P PP PP + P G +RP PP PPP AP
Sbjct: 480 PCRSTTPPPPPPRPPSRPKLPPGKPGVGDVSRPFSPPIHSSSPPPIAP 527
>AB209494-1|BAD92731.1| 2704|Homo sapiens myeloid/lymphoid or
mixed-lineage leukemia 2 variant protein.
Length = 2704
Score = 30.7 bits (66), Expect = 9.5
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = +1
Query: 430 PXKPXXXXPXPPXPPRKXAXPXGXRARPXXPPEXRXPPPXAP 555
P + P P PPR A P P P PPP +P
Sbjct: 1440 PLQELGAGPRPQGPPRLPAPPGALSTGPVLGPVHPTPPPSSP 1481
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,705,589
Number of Sequences: 237096
Number of extensions: 1111145
Number of successful extensions: 8115
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 3174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7017
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 14594798064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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