Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_E12
         (1102 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2897|AAF49349.4|  926|Drosophila melanogaster CG13731-P...    35   0.17 
BT021383-1|AAX33531.1| 1117|Drosophila melanogaster LD37257p pro...    31   3.7  
AY061106-1|AAL28654.1| 1177|Drosophila melanogaster LD09503p pro...    31   3.7  
AE014296-2728|AAF49469.2| 1117|Drosophila melanogaster CG4877-PB...    31   3.7  
AE014296-2727|AAF49470.3| 1117|Drosophila melanogaster CG4877-PA...    31   3.7  

>AE014296-2897|AAF49349.4|  926|Drosophila melanogaster CG13731-PA
           protein.
          Length = 926

 Score = 35.1 bits (77), Expect = 0.17
 Identities = 19/60 (31%), Positives = 21/60 (35%)
 Frame = -3

Query: 527 PSXRPXXRPXINXPXRXKXPNXHXPPXQRPPGXLXXPXXQTAXPXKXLPPRSXPRXKXXT 348
           P  RP  RP    P R        PP   PP     P   T  P    PPR+ P  +  T
Sbjct: 185 PPTRPPTRPPTRPPTRPPTRPPTPPPTYLPPTNKPLPPVTTRLPPPPPPPRTPPPTRPPT 244



 Score = 33.9 bits (74), Expect = 0.40
 Identities = 25/103 (24%), Positives = 30/103 (29%)
 Frame = -3

Query: 656 PXCPXXTPAPGGSXXXXPXXYGGXXHXXXTPGXVXPIXXHXIXPSXRPXXRPXINXPXRX 477
           P  P  TP P       P       +   T   + P+      P   P   P    P R 
Sbjct: 230 PPPPPRTPPPTRPPTRPPTTRPPATYLPPTNKPLPPVTTRLPPPPPSPRTPPPTRPPTRP 289

Query: 476 KXPNXHXPPXQRPPGXLXXPXXQTAXPXKXLPPRSXPRXKXXT 348
             P    P    PP     P   T  P    PPR+ P  +  T
Sbjct: 290 --PTTRPPATYLPPTNKPLPPVTTRLPPPPPPPRTPPPTRPPT 330


>BT021383-1|AAX33531.1| 1117|Drosophila melanogaster LD37257p
           protein.
          Length = 1117

 Score = 30.7 bits (66), Expect = 3.7
 Identities = 15/55 (27%), Positives = 22/55 (40%)
 Frame = -3

Query: 539 HXIXPSXRPXXRPXINXPXRXKXPNXHXPPXQRPPGXLXXPXXQTAXPXKXLPPR 375
           H + P  +      +  P +   P+   PP QR P     P  Q A P +  PP+
Sbjct: 508 HQLAPPQQRAPPQQLAPPHQLAPPHQLAPPQQRAPPQQLAPPQQLAPPQQLAPPQ 562


>AY061106-1|AAL28654.1| 1177|Drosophila melanogaster LD09503p
           protein.
          Length = 1177

 Score = 30.7 bits (66), Expect = 3.7
 Identities = 15/55 (27%), Positives = 22/55 (40%)
 Frame = -3

Query: 539 HXIXPSXRPXXRPXINXPXRXKXPNXHXPPXQRPPGXLXXPXXQTAXPXKXLPPR 375
           H + P  +      +  P +   P+   PP QR P     P  Q A P +  PP+
Sbjct: 508 HQLAPPQQRAPPQQLAPPHQLAPPHQLAPPQQRAPPQQLAPPQQLAPPQQLAPPQ 562


>AE014296-2728|AAF49469.2| 1117|Drosophila melanogaster CG4877-PB,
           isoform B protein.
          Length = 1117

 Score = 30.7 bits (66), Expect = 3.7
 Identities = 15/55 (27%), Positives = 22/55 (40%)
 Frame = -3

Query: 539 HXIXPSXRPXXRPXINXPXRXKXPNXHXPPXQRPPGXLXXPXXQTAXPXKXLPPR 375
           H + P  +      +  P +   P+   PP QR P     P  Q A P +  PP+
Sbjct: 508 HQLAPPQQRAPPQQLAPPHQLAPPHQLAPPQQRAPPQQLAPPQQLAPPQQLAPPQ 562


>AE014296-2727|AAF49470.3| 1117|Drosophila melanogaster CG4877-PA,
           isoform A protein.
          Length = 1117

 Score = 30.7 bits (66), Expect = 3.7
 Identities = 15/55 (27%), Positives = 22/55 (40%)
 Frame = -3

Query: 539 HXIXPSXRPXXRPXINXPXRXKXPNXHXPPXQRPPGXLXXPXXQTAXPXKXLPPR 375
           H + P  +      +  P +   P+   PP QR P     P  Q A P +  PP+
Sbjct: 508 HQLAPPQQRAPPQQLAPPHQLAPPHQLAPPQQRAPPQQLAPPQQLAPPQQLAPPQ 562


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,586,886
Number of Sequences: 53049
Number of extensions: 287545
Number of successful extensions: 837
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 5719323120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)