Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_E08
         (915 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021497-4|CAA16407.1|  386|Caenorhabditis elegans Hypothetical ...    42   6e-04
AL021497-1|CAA16404.1|  382|Caenorhabditis elegans Hypothetical ...    35   0.071
Z70750-3|CAA94738.1|  374|Caenorhabditis elegans Hypothetical pr...    31   0.87 
U64859-10|AAC69091.2|  383|Caenorhabditis elegans Hypothetical p...    31   0.87 
AL110477-10|CAB54334.1|  328|Caenorhabditis elegans Hypothetical...    31   1.1  

>AL021497-4|CAA16407.1|  386|Caenorhabditis elegans Hypothetical
           protein Y51A2D.8 protein.
          Length = 386

 Score = 41.9 bits (94), Expect = 6e-04
 Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
 Frame = +1

Query: 244 KNITGXYKDDADRELHYQSFKKHLAEINQLNEKNPY----TTFGINKFADYTPEEQQSRL 411
           K     YKD+++ +  + +F K    +++LN K+      T FGINKF+D +  E   RL
Sbjct: 48  KKYNRKYKDESENQQRFNNFVKSYNNVDKLNAKSKAAGYDTQFGINKFSDLSTAEFHGRL 107

Query: 412 GLRLPAKKT 438
              +P+  T
Sbjct: 108 SNVVPSNNT 116


>AL021497-1|CAA16404.1|  382|Caenorhabditis elegans Hypothetical
           protein Y51A2D.1 protein.
          Length = 382

 Score = 35.1 bits (77), Expect = 0.071
 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
 Frame = +1

Query: 244 KNITGXYKDDADRELHYQSFKKHLAEINQLNEK----NPYTTFGINKFADYTPEEQQSRL 411
           K  +  YK +A+ +L  Q+F K    + +LN+        + F +N+F+D T  E   RL
Sbjct: 49  KKFSRTYKSEAENQLRLQNFVKSRNNVVRLNKNAQKAGRNSNFAVNQFSDLTTSELHQRL 108

Query: 412 GLRLPAKKT 438
             R P   T
Sbjct: 109 S-RFPPNLT 116


>Z70750-3|CAA94738.1|  374|Caenorhabditis elegans Hypothetical
           protein C50F4.3 protein.
          Length = 374

 Score = 31.5 bits (68), Expect = 0.87
 Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
 Frame = +1

Query: 262 YKDDADRELHYQSF---KKHLAEINQLNEKNPYTT-FGINKFADYTPEE 396
           YKD+ +++  +Q F      + ++N+  +K  + T +GINKF+D + +E
Sbjct: 58  YKDEIEKKFRFQQFVATHNRVGKMNKAAKKAGHDTKYGINKFSDLSKKE 106


>U64859-10|AAC69091.2|  383|Caenorhabditis elegans Hypothetical
           protein R09F10.1 protein.
          Length = 383

 Score = 31.5 bits (68), Expect = 0.87
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = +1

Query: 262 YKDDADRELHYQSFKKHLAEINQLNEKNPYTTFGINKFADYTPEEQQ 402
           Y    + E  YQ F +++ E     E+N      +N+F D+T EE Q
Sbjct: 93  YTSVEEFEYRYQIFLRNVIEFEAEEERNLGLDLDVNEFTDWTDEELQ 139


>AL110477-10|CAB54334.1|  328|Caenorhabditis elegans Hypothetical
           protein Y113G7B.15 protein.
          Length = 328

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
 Frame = +1

Query: 262 YKDDADRELHYQSFKKHLAEINQLNEK----NPYTTFGINKFADYTPEEQQSR 408
           Y+  A+++     F K+  +I +LN K        TFG NKFAD   +E  +R
Sbjct: 7   YRTPAEKDRRLAHFAKNHQKIQELNAKARREGRNVTFGWNKFADKNRQELSAR 59


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,764,929
Number of Sequences: 27780
Number of extensions: 253441
Number of successful extensions: 685
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 685
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)