Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_E06
(905 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA ... 219 2e-57
AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid de... 219 2e-57
Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical pr... 217 7e-57
AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA ... 217 7e-57
Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical pr... 195 3e-50
AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA... 195 3e-50
U80952-2|AAB38094.1| 309|Caenorhabditis elegans Muscle attachme... 29 4.6
U80952-1|AAU20846.1| 315|Caenorhabditis elegans Muscle attachme... 29 4.6
U41024-1|AAA82345.2| 679|Caenorhabditis elegans Hypothetical pr... 28 8.0
>AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-7 protein.
Length = 338
Score = 219 bits (536), Expect = 2e-57
Identities = 93/162 (57%), Positives = 124/162 (76%), Gaps = 2/162 (1%)
Frame = +1
Query: 256 VPPSAEKRPWK--IVWRNVILFFILHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGIT 429
V ++K P+K IVWRNV LF LHV G Y +F A W+T++F+ LY+ SG GIT
Sbjct: 33 VQEESKKIPYKMEIVWRNVALFAALHVAAAIGLYELVFHAKWQTAVFSFALYVFSGFGIT 92
Query: 430 AGAHRLWAHKSYKARLPLRILLTIFNTIAFQDAVVDWARDHRMHHKYSETDADPHNATRG 609
AGAHRLW+HKSYKA P+RI L + N IA Q+ +++WARDHR HHK+++TDADPHN TRG
Sbjct: 93 AGAHRLWSHKSYKATTPMRIFLMLLNNIALQNDIIEWARDHRCHHKWTDTDADPHNTTRG 152
Query: 610 FFFSHIGWLLLRKHPEIKAKGHTVDVNDLHNDPILRFQKKYY 735
FFF+H+GWLL+RKHP++K G +D++DL +DP+L FQ+K+Y
Sbjct: 153 FFFTHMGWLLVRKHPQVKEHGGKLDLSDLFSDPVLVFQRKHY 194
Score = 64.5 bits (150), Expect = 1e-10
Identities = 31/64 (48%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = +2
Query: 716 VFRRSTTKILMPLACFIMPTYVPT-LWGETVWNSFYVCAIFRYVYVLNITWVGNSAAHXL 892
VF+R L+ L CFI+PT +P W ET + +FYV FRY + L+ TW NSAAH
Sbjct: 188 VFQRKHYFPLVILFCFILPTIIPVYFWKETAFIAFYVAGTFRYCFTLHATWCINSAAHYF 247
Query: 893 GSKP 904
G KP
Sbjct: 248 GWKP 251
>AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid
desaturase protein 7 protein.
Length = 338
Score = 219 bits (536), Expect = 2e-57
Identities = 93/162 (57%), Positives = 124/162 (76%), Gaps = 2/162 (1%)
Frame = +1
Query: 256 VPPSAEKRPWK--IVWRNVILFFILHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGIT 429
V ++K P+K IVWRNV LF LHV G Y +F A W+T++F+ LY+ SG GIT
Sbjct: 33 VQEESKKIPYKMEIVWRNVALFAALHVAAAIGLYELVFHAKWQTAVFSFALYVFSGFGIT 92
Query: 430 AGAHRLWAHKSYKARLPLRILLTIFNTIAFQDAVVDWARDHRMHHKYSETDADPHNATRG 609
AGAHRLW+HKSYKA P+RI L + N IA Q+ +++WARDHR HHK+++TDADPHN TRG
Sbjct: 93 AGAHRLWSHKSYKATTPMRIFLMLLNNIALQNDIIEWARDHRCHHKWTDTDADPHNTTRG 152
Query: 610 FFFSHIGWLLLRKHPEIKAKGHTVDVNDLHNDPILRFQKKYY 735
FFF+H+GWLL+RKHP++K G +D++DL +DP+L FQ+K+Y
Sbjct: 153 FFFTHMGWLLVRKHPQVKEHGGKLDLSDLFSDPVLVFQRKHY 194
Score = 64.5 bits (150), Expect = 1e-10
Identities = 31/64 (48%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = +2
Query: 716 VFRRSTTKILMPLACFIMPTYVPT-LWGETVWNSFYVCAIFRYVYVLNITWVGNSAAHXL 892
VF+R L+ L CFI+PT +P W ET + +FYV FRY + L+ TW NSAAH
Sbjct: 188 VFQRKHYFPLVILFCFILPTIIPVYFWKETAFIAFYVAGTFRYCFTLHATWCINSAAHYF 247
Query: 893 GSKP 904
G KP
Sbjct: 248 GWKP 251
>Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical
protein VZK822L.1 protein.
Length = 339
Score = 217 bits (531), Expect = 7e-57
Identities = 93/158 (58%), Positives = 121/158 (76%), Gaps = 2/158 (1%)
Frame = +1
Query: 268 AEKRPWK--IVWRNVILFFILHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGITAGAH 441
++K P+K IVWRNV LF LH G Y +F+A W+T IF LY+ G GITAGAH
Sbjct: 38 SKKIPYKMEIVWRNVALFAALHFAAAIGLYQLIFEAKWQTVIFTFLLYVFGGFGITAGAH 97
Query: 442 RLWAHKSYKARLPLRILLTIFNTIAFQDAVVDWARDHRMHHKYSETDADPHNATRGFFFS 621
RLW+HKSYKA P+RI L I N IA Q+ V++WARDHR HHK+++TDADPHN TRGFFF+
Sbjct: 98 RLWSHKSYKATTPMRIFLMILNNIALQNDVIEWARDHRCHHKWTDTDADPHNTTRGFFFA 157
Query: 622 HIGWLLLRKHPEIKAKGHTVDVNDLHNDPILRFQKKYY 735
H+GWLL+RKHP++K +G +D++DL +DP+L FQ+K+Y
Sbjct: 158 HMGWLLVRKHPQVKEQGAKLDMSDLLSDPVLVFQRKHY 195
Score = 63.7 bits (148), Expect = 2e-10
Identities = 30/64 (46%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +2
Query: 716 VFRRSTTKILMPLACFIMPTYVPT-LWGETVWNSFYVCAIFRYVYVLNITWVGNSAAHXL 892
VF+R L+ L CFI+PT +P W ET + +FY FRY + L+ TW NSAAH
Sbjct: 189 VFQRKHYFPLVILCCFILPTIIPVYFWKETAFIAFYTAGTFRYCFTLHATWCINSAAHYF 248
Query: 893 GSKP 904
G KP
Sbjct: 249 GWKP 252
>AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-6 protein.
Length = 339
Score = 217 bits (531), Expect = 7e-57
Identities = 93/158 (58%), Positives = 121/158 (76%), Gaps = 2/158 (1%)
Frame = +1
Query: 268 AEKRPWK--IVWRNVILFFILHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGITAGAH 441
++K P+K IVWRNV LF LH G Y +F+A W+T IF LY+ G GITAGAH
Sbjct: 38 SKKIPYKMEIVWRNVALFAALHFAAAIGLYQLIFEAKWQTVIFTFLLYVFGGFGITAGAH 97
Query: 442 RLWAHKSYKARLPLRILLTIFNTIAFQDAVVDWARDHRMHHKYSETDADPHNATRGFFFS 621
RLW+HKSYKA P+RI L I N IA Q+ V++WARDHR HHK+++TDADPHN TRGFFF+
Sbjct: 98 RLWSHKSYKATTPMRIFLMILNNIALQNDVIEWARDHRCHHKWTDTDADPHNTTRGFFFA 157
Query: 622 HIGWLLLRKHPEIKAKGHTVDVNDLHNDPILRFQKKYY 735
H+GWLL+RKHP++K +G +D++DL +DP+L FQ+K+Y
Sbjct: 158 HMGWLLVRKHPQVKEQGAKLDMSDLLSDPVLVFQRKHY 195
Score = 63.7 bits (148), Expect = 2e-10
Identities = 30/64 (46%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +2
Query: 716 VFRRSTTKILMPLACFIMPTYVPT-LWGETVWNSFYVCAIFRYVYVLNITWVGNSAAHXL 892
VF+R L+ L CFI+PT +P W ET + +FY FRY + L+ TW NSAAH
Sbjct: 189 VFQRKHYFPLVILCCFILPTIIPVYFWKETAFIAFYTAGTFRYCFTLHATWCINSAAHYF 248
Query: 893 GSKP 904
G KP
Sbjct: 249 GWKP 252
>Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical
protein W06D12.3 protein.
Length = 333
Score = 195 bits (476), Expect = 3e-50
Identities = 77/150 (51%), Positives = 112/150 (74%)
Frame = +1
Query: 286 KIVWRNVILFFILHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGITAGAHRLWAHKSY 465
+IVW+NV LF LH+G + G Y +F+A W T + L+ +G+T GAHRLWAH++Y
Sbjct: 37 EIVWKNVALFVALHIGALVGLYQLVFQAKWATVGWVFLLHTLGSMGVTGGAHRLWAHRAY 96
Query: 466 KARLPLRILLTIFNTIAFQDAVVDWARDHRMHHKYSETDADPHNATRGFFFSHIGWLLLR 645
KA L R+ L + N+IAFQ+ ++DWARDHR HHK+++TDADPH+ RG FF+H+GWLL++
Sbjct: 97 KATLSWRVFLMLINSIAFQNDIIDWARDHRCHHKWTDTDADPHSTNRGMFFAHMGWLLVK 156
Query: 646 KHPEIKAKGHTVDVNDLHNDPILRFQKKYY 735
KH ++K +G +D++DL+ DP+L FQ+K Y
Sbjct: 157 KHDQLKIQGGKLDLSDLYEDPVLMFQRKNY 186
Score = 64.1 bits (149), Expect = 1e-10
Identities = 26/64 (40%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Frame = +2
Query: 716 VFRRSTTKILMPLACFIMPTYVPT-LWGETVWNSFYVCAIFRYVYVLNITWVGNSAAHXL 892
+F+R L+ + CF +PT++P LWGE+ + +FY A+FRY + L+ TW NS +H +
Sbjct: 180 MFQRKNYLPLVGIFCFALPTFIPVVLWGESAFIAFYTAALFRYCFTLHATWCINSVSHWV 239
Query: 893 GSKP 904
G +P
Sbjct: 240 GWQP 243
>AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA
fatty acid desaturaseFAT-5 protein.
Length = 333
Score = 195 bits (476), Expect = 3e-50
Identities = 77/150 (51%), Positives = 112/150 (74%)
Frame = +1
Query: 286 KIVWRNVILFFILHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGITAGAHRLWAHKSY 465
+IVW+NV LF LH+G + G Y +F+A W T + L+ +G+T GAHRLWAH++Y
Sbjct: 37 EIVWKNVALFVALHIGALVGLYQLVFQAKWATVGWVFLLHTLGSMGVTGGAHRLWAHRAY 96
Query: 466 KARLPLRILLTIFNTIAFQDAVVDWARDHRMHHKYSETDADPHNATRGFFFSHIGWLLLR 645
KA L R+ L + N+IAFQ+ ++DWARDHR HHK+++TDADPH+ RG FF+H+GWLL++
Sbjct: 97 KATLSWRVFLMLINSIAFQNDIIDWARDHRCHHKWTDTDADPHSTNRGMFFAHMGWLLVK 156
Query: 646 KHPEIKAKGHTVDVNDLHNDPILRFQKKYY 735
KH ++K +G +D++DL+ DP+L FQ+K Y
Sbjct: 157 KHDQLKIQGGKLDLSDLYEDPVLMFQRKNY 186
Score = 64.1 bits (149), Expect = 1e-10
Identities = 26/64 (40%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Frame = +2
Query: 716 VFRRSTTKILMPLACFIMPTYVPT-LWGETVWNSFYVCAIFRYVYVLNITWVGNSAAHXL 892
+F+R L+ + CF +PT++P LWGE+ + +FY A+FRY + L+ TW NS +H +
Sbjct: 180 MFQRKNYLPLVGIFCFALPTFIPVVLWGESAFIAFYTAALFRYCFTLHATWCINSVSHWV 239
Query: 893 GSKP 904
G +P
Sbjct: 240 GWQP 243
>U80952-2|AAB38094.1| 309|Caenorhabditis elegans Muscle attachment
abnormal protein1, isoform a protein.
Length = 309
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 172 MPPQRKQEASWVLYETDANDLPEDAPPHVPPSAEKRP 282
+PP +A + + +P +PPH PPS E P
Sbjct: 66 LPPTPHFQAPFSPHPPPVQQVPSYSPPHAPPSYETYP 102
>U80952-1|AAU20846.1| 315|Caenorhabditis elegans Muscle attachment
abnormal protein1, isoform b protein.
Length = 315
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 172 MPPQRKQEASWVLYETDANDLPEDAPPHVPPSAEKRP 282
+PP +A + + +P +PPH PPS E P
Sbjct: 72 LPPTPHFQAPFSPHPPPVQQVPSYSPPHAPPSYETYP 108
>U41024-1|AAA82345.2| 679|Caenorhabditis elegans Hypothetical
protein T14G11.3 protein.
Length = 679
Score = 28.3 bits (60), Expect = 8.0
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 586 DPHNATRG-FFFSHIGWLLLRKHPEIKAKGHTVDVNDLHNDPILRFQKKYYQN 741
D + T G +F+S++ L L P+ +DVN+ N IL K+Y N
Sbjct: 573 DENGGTLGAYFWSYVKSLFLVDMPQQYGNLDAIDVNNTDNYEILSRAKQYVHN 625
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,296,864
Number of Sequences: 27780
Number of extensions: 574614
Number of successful extensions: 1793
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1785
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -