Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_E03
         (939 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    24   1.7  
AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc fi...    23   3.0  
AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    23   3.0  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   5.3  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   5.3  

>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
           finger domain-Z3 isoform protein.
          Length = 92

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = +2

Query: 203 CPICKADLKSASQLTNHFESLHQE 274
           CP C+ +      L  HF+  H++
Sbjct: 8   CPYCRRNFSCYYSLKRHFQDKHEQ 31



 Score = 23.8 bits (49), Expect = 2.3
 Identities = 9/34 (26%), Positives = 16/34 (47%)
 Frame = +2

Query: 197 FLCPICKADLKSASQLTNHFESLHQEDQDVLKSL 298
           ++C  C    ++ + LT H    H+    +LK L
Sbjct: 36  YVCEFCNRRYRTKNSLTTHKSLQHRGSSGMLKRL 69


>AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc
           finger domain-Z2 isoform protein.
          Length = 71

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 662 CRLCGSILCHDCSV 703
           C+LCG +LC   S+
Sbjct: 8   CQLCGKVLCSKASL 21



 Score = 23.0 bits (47), Expect = 4.0
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = +2

Query: 197 FLCPICKADLKSASQLTNHFESLHQEDQD 283
           F C +C   L S + L  H    H E Q+
Sbjct: 6   FTCQLCGKVLCSKASLKRHVADKHAERQE 34


>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +2

Query: 200 LCPICKADLKSASQLTNHFESLHQE 274
           +C ICK    S + L NH    H++
Sbjct: 34  ICNICKRVYSSLNSLRNHKSIYHRQ 58


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.6 bits (46), Expect = 5.3
 Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +2

Query: 239 QLTNHFESLHQE-DQDVLKSLKDIFGKAKTIILNNENADLKETFARAL 379
           ++T   +++ QE   DVL S  D++    T+  NN+  +   T   A+
Sbjct: 354 EITGLIQNIIQEMKNDVLLSNNDVYLYQNTMSNNNQRTEWSATVKAAI 401


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.6 bits (46), Expect = 5.3
 Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +2

Query: 239 QLTNHFESLHQE-DQDVLKSLKDIFGKAKTIILNNENADLKETFARAL 379
           ++T   +++ QE   DVL S  D++    T+  NN+  +   T   A+
Sbjct: 392 EITGLIQNIIQEMKNDVLLSNNDVYLYQNTMSNNNQRTEWSATVKAAI 439


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,158
Number of Sequences: 438
Number of extensions: 3021
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30718506
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)