Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_E02
(915 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 148 1e-36
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 145 9e-36
SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr 1|||... 131 2e-31
SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces pomb... 118 9e-28
SPBC16A3.01 |spn3|SPBC543.01c|septin Spn3|Schizosaccharomyces po... 100 2e-22
SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces p... 86 8e-18
SPBC19F8.01c |spn7|SPBC21.08c|septin Spn7|Schizosaccharomyces po... 65 1e-11
SPBC1711.17 |prp16|SPBC17G9.01|ATP-dependent RNA helicase Prp16|... 31 0.17
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 31 0.17
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 30 0.40
SPBC32H8.06 |mug93||TPR repeat protein, meiotically spliced|Schi... 30 0.40
SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5 |Schizo... 30 0.53
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 28 2.1
SPBC4C3.05c |nuc1|rpa1|DNA-directed RNA polymerase I complex lar... 27 2.8
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 27 3.7
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 27 4.9
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 27 4.9
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 27 4.9
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 148 bits (358), Expect = 1e-36
Identities = 76/177 (42%), Positives = 108/177 (61%), Gaps = 3/177 (1%)
Frame = +1
Query: 244 GYVGFANLPNQVHRKSVKKGFEFTLMVVGESGLGKSTLVNSLFLTDLYP---ERVIPDAT 414
GYVGFA+LPNQ HR+ V++GF F ++V+GESG GKSTLVN+L D+YP + + D
Sbjct: 74 GYVGFASLPNQWHRRCVRQGFNFNVLVLGESGSGKSTLVNTLLNRDVYPPTQKSLTGDFG 133
Query: 415 EKTNQTVKLDASTVEIEERGVKLRLTVVDTPGYGDAIDNTDCFRSIIQYIDEQFERFLRD 594
TV +++S VEI E G+ L+L V+DTPG+GD IDNTDC++ ++ I+ +++++L
Sbjct: 134 VNPEPTVMINSSAVEIVENGISLQLNVIDTPGFGDFIDNTDCWQPVLTDIEGRYDQYLEL 193
Query: 595 ESGLNRRNIVDNRIHCCFYFISPVWTRGXXXXXXXXXNSCTTKLTSYRXIAKADCLT 765
E R I D R+H C +FI P + K+ IAKAD LT
Sbjct: 194 EKHNPRSTIQDPRVHACIFFIQPT-GHAISAMELRVMLALHEKVNIIPIIAKADTLT 249
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 145 bits (351), Expect = 9e-36
Identities = 75/183 (40%), Positives = 110/183 (60%), Gaps = 4/183 (2%)
Frame = +1
Query: 229 NLETPGYVGFANLPNQVHRKSVKKGFEFTLMVVGESGLGKSTLVNSLFLTDLY----PER 396
N E +VG A+LPNQ H+ + G FTLM+ GESGLGK+T N+LF T + PE+
Sbjct: 2 NEEETNFVGIADLPNQRHKIVSRNGVAFTLMLCGESGLGKTTFCNTLFSTTIKSHMGPEK 61
Query: 397 VIPDATEKTNQTVKLDASTVEIEERGVKLRLTVVDTPGYGDAIDNTDCFRSIIQYIDEQF 576
V EKT V+++ + E+EE+ LRLTV+DTPG+GD I+N+ C+ S++++I++Q
Sbjct: 62 VRAKHAEKT---VEIEITKAELEEKNFHLRLTVIDTPGFGDFINNSGCWESVVEFIEDQH 118
Query: 577 ERFLRDESGLNRRNIVDNRIHCCFYFISPVWTRGXXXXXXXXXNSCTTKLTSYRXIAKAD 756
E ++R + +RR I+D RIH C YF+ PV G + ++ IAKAD
Sbjct: 119 ESYMRQDQQPDRRKIIDMRIHACLYFLRPV-RNGVRPMDLEAMKHISKRVNLIPVIAKAD 177
Query: 757 CLT 765
T
Sbjct: 178 MYT 180
>SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 331
Score = 131 bits (316), Expect = 2e-31
Identities = 67/176 (38%), Positives = 101/176 (57%), Gaps = 1/176 (0%)
Frame = +1
Query: 247 YVGFANLPNQVHRKSVKKGFEFTLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTN 426
YVGF ++ +Q++RK +++GF+F +MVVG SG GKSTL+N+LF L + D
Sbjct: 12 YVGFDSITSQINRKLIRRGFQFNVMVVGPSGSGKSTLINTLFSAHLMDSKGRLDYQAPYR 71
Query: 427 QTVKLDASTVEIEERGVKLRLTVVDTPGYGDAIDNTDCFRSIIQYIDEQFERFLRDESGL 606
QT ++ ++ + E V+L+L ++DTPGYGD I+N C+ II+YI +Q +LR E
Sbjct: 72 QTTEIHVTSQVVRENRVQLQLNLIDTPGYGDQINNDKCWEPIIKYIRDQHSSYLRRELNS 131
Query: 607 NR-RNIVDNRIHCCFYFISPVWTRGXXXXXXXXXNSCTTKLTSYRXIAKADCLT*E 771
+R + + D R+HCC +FI P T + IAK+D LT E
Sbjct: 132 HREKRLQDTRVHCCLFFIRPT-GHSLRPIDIAVLKRLTEVVNVVPVIAKSDSLTLE 186
>SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 380
Score = 118 bits (285), Expect = 9e-28
Identities = 64/169 (37%), Positives = 93/169 (55%), Gaps = 1/169 (0%)
Frame = +1
Query: 262 NLPNQVHRKSVKKGFEFTLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEK-TNQTVK 438
+LP++ +K T+M+ G SG GK+T N+LF T L PE+ A E +T++
Sbjct: 15 SLPSKRENLIKRKECGLTIMLCGASGTGKTTFFNTLFATSLQPEKSYETAKETIAKKTLE 74
Query: 439 LDASTVEIEERGVKLRLTVVDTPGYGDAIDNTDCFRSIIQYIDEQFERFLRDESGLNRRN 618
+ + IEE G + LTV+DTPG+GD IDNT C+ ++ +Y+DEQ ER+L + R
Sbjct: 75 VKKNKAVIEEDGFHINLTVLDTPGFGDFIDNTSCWNTVAEYLDEQHERYLIHDQNSLRVP 134
Query: 619 IVDNRIHCCFYFISPVWTRGXXXXXXXXXNSCTTKLTSYRXIAKADCLT 765
D R+H C YFI+PV + G +T + IAKAD T
Sbjct: 135 RKDTRVHVCLYFITPV-SFGMLPLDVLAMKELSTHVNLVPVIAKADTFT 182
>SPBC16A3.01 |spn3|SPBC543.01c|septin Spn3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 412
Score = 100 bits (240), Expect = 2e-22
Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 3/201 (1%)
Frame = +1
Query: 172 EYNIKKLLKMSNETNKTFSNLETPGYVGFANLPNQVHRKSVKKGFEFTLMVVGESGLGKS 351
++ + +LL + + T T G + L + +KS KKG LMVVG+ GLG++
Sbjct: 8 DFGVVQLLFLHSNDTLTARTHITKGQIDI-ELTMRTTKKSSKKGIPLNLMVVGDVGLGRT 66
Query: 352 TLVNSLFLTDL--YPERVIPDATEKTNQTVKLDASTVEIEERGVKLRLTVVDTPGYGDAI 525
+N+L L + P + + T I E G K+ LTV+DTP +G+AI
Sbjct: 67 AFINTLCEKPLIRHNNNFDPAEASSVSPVEIVPYQTDIILEDGTKINLTVLDTPHFGEAI 126
Query: 526 DNTDCFRSIIQYIDEQFERFLRDESGLNRR-NIVDNRIHCCFYFISPVWTRGXXXXXXXX 702
DN + F I+QYI+ Q++ L +ES + R D+R+H YFISP G
Sbjct: 127 DNENNFDIILQYIESQYDNVLEEESRIKRNARFCDDRVHALIYFISPT-GHGLRELDIEL 185
Query: 703 XNSCTTKLTSYRXIAKADCLT 765
++ IAKAD LT
Sbjct: 186 MRRLAPRVNIIPAIAKADSLT 206
>SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 464
Score = 85.8 bits (203), Expect = 8e-18
Identities = 45/157 (28%), Positives = 81/157 (51%), Gaps = 1/157 (0%)
Frame = +1
Query: 196 KMSNETNKTFSNLETPGYVGFANLPNQVHRKSVKKGFEFTLMVVGESGLGKSTLVNSLFL 375
++ N K+ +G + +Q + + + G + L+VVGES LGK+T VNS
Sbjct: 81 EVPNSNGKSIPTFHPCNNIGINDFNHQHYSRVCRNGIDINLIVVGESSLGKTTFVNSFLQ 140
Query: 376 TDLYPERVIPDATEKTNQTVKLDASTVEIEERGVKLRLTVVDTPGYGDAIDNTDCFRSII 555
++ D + +T+ + + K LT+VDTPG+GD DN++C+R I
Sbjct: 141 SN--------DTNFRPKKTMDFVEHKATLSDGDQKFNLTIVDTPGFGDKSDNSNCWRPIA 192
Query: 556 QYIDEQFERFLRDESGLNRR-NIVDNRIHCCFYFISP 663
+ + + ++E ++R + +D+RIH C +FI+P
Sbjct: 193 TNLLHRLNAYFQNEVKMDRETSEIDSRIHGCLFFINP 229
>SPBC19F8.01c |spn7|SPBC21.08c|septin Spn7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 65.3 bits (152), Expect = 1e-11
Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 2/125 (1%)
Frame = +1
Query: 295 KKGFEFTLMVVGESGLGKSTLVNSLFLTD-LYPERVIPDATEKTNQTVKLDASTVEIEER 471
KKG + +MV G S +NSL L E I ++ +++ +I E
Sbjct: 14 KKGKKLRIMVAGSSYTSYQACINSLCSKQILEAETEIDPLKAHIDRILEIREFNADILED 73
Query: 472 GVKLRLTVVDTPGYGDAIDNTDCFRSIIQYIDEQFERFLRDESGLNRRN-IVDNRIHCCF 648
+ LTV++ G+GD IDN+ F + Y++ QF++ L +ES + R + D R+
Sbjct: 74 EFHVDLTVIEVNGFGDKIDNSASFEVVTHYLESQFDQALIEESKIKRNSKFTDTRVDALL 133
Query: 649 YFISP 663
YFI+P
Sbjct: 134 YFIAP 138
>SPBC1711.17 |prp16|SPBC17G9.01|ATP-dependent RNA helicase
Prp16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1173
Score = 31.5 bits (68), Expect = 0.17
Identities = 25/85 (29%), Positives = 39/85 (45%)
Frame = +1
Query: 316 LMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIEERGVKLRLTV 495
L+VVGE+G GK+T + D Y + T+ A V EE GV+L TV
Sbjct: 511 LIVVGETGSGKTTQLAQFLYEDGYHRNGMIGCTQPRRVAAMSVAKRVS-EEMGVRLGSTV 569
Query: 496 VDTPGYGDAIDNTDCFRSIIQYIDE 570
GY ++ ++I+Y+ +
Sbjct: 570 ----GYSIRFEDVTGPDTVIKYMTD 590
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 31.5 bits (68), Expect = 0.17
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +1
Query: 310 FTLMVVGESGLGKSTLVNSLFLTDLYPERVIPD-ATEKTNQTVKLDASTVEIE 465
F L+++G+SG+GKS L+ F D Y E I + +T +L+ TV+++
Sbjct: 9 FKLLLIGDSGVGKSCLL-LRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQ 60
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 30.3 bits (65), Expect = 0.40
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = +1
Query: 316 LMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEK--TNQTVKLDASTVEI 462
L+VVG+ G GK+ L+ +F + +PER +P E T+ T ++ +E+
Sbjct: 17 LVVVGDGGCGKTCLL-IVFSSGTFPERYVPTVFENYITDITYGPNSKVIEL 66
>SPBC32H8.06 |mug93||TPR repeat protein, meiotically
spliced|Schizosaccharomyces pombe|chr 2|||Manual
Length = 383
Score = 30.3 bits (65), Expect = 0.40
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 696 EFLKQLHNKVNIVPXYRQSGLSHLRK 773
EFL + N+ I P Y S L+HLRK
Sbjct: 29 EFLNAIGNENTITPVYADSSLTHLRK 54
>SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1065
Score = 29.9 bits (64), Expect = 0.53
Identities = 14/49 (28%), Positives = 30/49 (61%)
Frame = +1
Query: 319 MVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIE 465
+++G +G GKST+V+++ + +P +++ A E + +K +T IE
Sbjct: 37 LIIGPNGTGKSTIVSAICIGLGWPPKLLGRAKE-AREFIKYGKNTATIE 84
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/50 (24%), Positives = 27/50 (54%)
Frame = +1
Query: 316 LMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIE 465
L+++G+SG+GKS L+ P + + +T++LD ++++
Sbjct: 12 LLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQ 61
>SPBC4C3.05c |nuc1|rpa1|DNA-directed RNA polymerase I complex large
subunit Nuc1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1689
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -1
Query: 663 R*YEVEAAMNAIVHNVTTV 607
R Y VEAA NAIVH V++V
Sbjct: 1574 RIYGVEAARNAIVHEVSSV 1592
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 27.1 bits (57), Expect = 3.7
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +1
Query: 307 EFTLMVVGESGLGKSTLVNSLFLTDLYPERVIPDATEKTNQTVKLDASTVEIEERGVKLR 486
+F L+ +GE +GK++L+ + F+ D + D T + + + T+ +E+R V+L+
Sbjct: 11 KFKLVFLGEQSVGKTSLI-TRFMYDQF------DNTYQATIGIDFLSKTMYLEDRTVRLQ 63
Query: 487 LTVVDTPG 510
L DT G
Sbjct: 64 LW--DTAG 69
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 26.6 bits (56), Expect = 4.9
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 262 NLPNQVHRKSVKKGFEFTLMVVGESGLGKSTLVNSLF 372
NLP ++ SV + + +VG +G GKSTL +LF
Sbjct: 1236 NLPLVLNDISVNIKPQEKIGIVGRTGAGKSTLTLALF 1272
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 26.6 bits (56), Expect = 4.9
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +1
Query: 322 VVGESGLGKSTLVNSLFLTDLYP-ERVIPDATEKTN-QTVKLDASTVEIEERGVKLRLTV 495
+VG SG GKSTLV L T YP E + D TN T L ++++ L T+
Sbjct: 1133 IVGISGSGKSTLVELLRKT--YPSEDIYIDGYPLTNIDTNWLLKKVAIVDQKPHLLGSTI 1190
Query: 496 VDTPGYG 516
+++ YG
Sbjct: 1191 LESLLYG 1197
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 307 EFTLMVVGESGLGKSTLVNSLFLTDLYPE 393
E+ L+VVG+ G+GKS L L + E
Sbjct: 8 EYKLVVVGDGGVGKSALTIQLIQSHFVDE 36
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,933,194
Number of Sequences: 5004
Number of extensions: 55162
Number of successful extensions: 288
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 274
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 464508080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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