Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_E01
         (918 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC096212-1|AAH96212.1|  162|Homo sapiens PRB3 protein protein.         34   0.83 
S80905-1|AAB50686.1|  382|Homo sapiens Con1 protein.                   32   3.4  
K03208-1|AAA60189.1|  251|Homo sapiens PRB2 protein.                   32   3.4  
X07517-1|CAA30395.2|  236|Homo sapiens salivary proline-rich pro...    31   4.4  

>BC096212-1|AAH96212.1|  162|Homo sapiens PRB3 protein protein.
          Length = 162

 Score = 33.9 bits (74), Expect = 0.83
 Identities = 19/58 (32%), Positives = 22/58 (37%)
 Frame = +2

Query: 569 KETXHPPGXGGWXXGPXSVPXXXNPXPPXFRLXXPVSPPPRXXXRXXPKPGGXPRKXL 742
           K    PP  G    GP   P      PP      P  PPP    +  P PGG P++ L
Sbjct: 77  KPEGQPPQGGNKPQGPPPHPGKPQGPPPQ-EGNKPQRPPPPGRPQGPPPPGGNPQQPL 133


>S80905-1|AAB50686.1|  382|Homo sapiens Con1 protein.
          Length = 382

 Score = 31.9 bits (69), Expect = 3.4
 Identities = 20/75 (26%), Positives = 25/75 (33%)
 Frame = +2

Query: 584 PPGXGGWXXGPXSVPXXXNPXPPXFRLXXPVSPPPRXXXRXXPKPGGXPRKXLLNQXAXK 763
           PP  G    GP   P      PP      P  PPP    +  P  GG   +   +     
Sbjct: 274 PPQGGNQPQGPPPPPGKPQGPPPQGG-NKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKP 332

Query: 764 XPXPKRXVVGXQGPP 808
              P++     QGPP
Sbjct: 333 QGPPQQEGNNPQGPP 347


>K03208-1|AAA60189.1|  251|Homo sapiens PRB2 protein.
          Length = 251

 Score = 31.9 bits (69), Expect = 3.4
 Identities = 20/75 (26%), Positives = 25/75 (33%)
 Frame = +2

Query: 584 PPGXGGWXXGPXSVPXXXNPXPPXFRLXXPVSPPPRXXXRXXPKPGGXPRKXLLNQXAXK 763
           PP  G    GP   P      PP      P  PPP    +  P  GG   +   +     
Sbjct: 143 PPQGGNQPQGPPPPPGKPQGPPPQGG-NKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKP 201

Query: 764 XPXPKRXVVGXQGPP 808
              P++     QGPP
Sbjct: 202 QGPPQQEGNNPQGPP 216


>X07517-1|CAA30395.2|  236|Homo sapiens salivary proline-rich
           protein protein.
          Length = 236

 Score = 31.5 bits (68), Expect = 4.4
 Identities = 20/75 (26%), Positives = 25/75 (33%)
 Frame = +2

Query: 584 PPGXGGWXXGPXSVPXXXNPXPPXFRLXXPVSPPPRXXXRXXPKPGGXPRKXLLNQXAXK 763
           PP  G    GP   P      PP      P  PPP    +  P  GG   +   +     
Sbjct: 128 PPQGGNQPQGPPPPPGKPQGPPPQGG-NKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKP 186

Query: 764 XPXPKRXVVGXQGPP 808
              P++     QGPP
Sbjct: 187 QGPPQQEGNNPQGPP 201


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,536,789
Number of Sequences: 237096
Number of extensions: 1335627
Number of successful extensions: 2464
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2288
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11936890730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)