Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_E01
         (918 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L02106-2|AAA99872.1|  465|Drosophila melanogaster ribonucleoprot...    31   2.2  
L02106-1|AAA99873.1|  471|Drosophila melanogaster ribonucleoprot...    31   2.2  
BT010254-1|AAQ23572.1|  196|Drosophila melanogaster RE34656p pro...    31   2.2  
BT001320-1|AAN71075.1|  434|Drosophila melanogaster AT15526p pro...    31   2.2  
AE014297-4014|AAX53003.1|  434|Drosophila melanogaster CG6354-PE...    31   2.2  
AE014297-4013|AAX53002.1|  434|Drosophila melanogaster CG6354-PD...    31   2.2  
AE014297-4012|AAX53001.1|  471|Drosophila melanogaster CG6354-PI...    31   2.2  
AE014297-4011|AAX53000.1|  471|Drosophila melanogaster CG6354-PH...    31   2.2  
AE014297-4010|AAX52999.1|  471|Drosophila melanogaster CG6354-PF...    31   2.2  
AE014297-4009|AAF56633.1|  471|Drosophila melanogaster CG6354-PB...    31   2.2  
AE014297-4008|AAX52998.1|  465|Drosophila melanogaster CG6354-PG...    31   2.2  
AE014297-4007|AAX52997.1|  465|Drosophila melanogaster CG6354-PC...    31   2.2  
AE014297-4006|AAN14092.1|  465|Drosophila melanogaster CG6354-PA...    31   2.2  

>L02106-2|AAA99872.1|  465|Drosophila melanogaster ribonucleoprotein
           protein.
          Length = 465

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 19/76 (25%), Positives = 25/76 (32%), Gaps = 1/76 (1%)
 Frame = +2

Query: 584 PPGXGGWXXGPXSVPXXXNPXPPX-FRLXXPVSPPPRXXXRXXPKPGGXPRKXLLNQXAX 760
           PP    W   P ++P      PP       P  PP +      P P    ++   NQ   
Sbjct: 270 PPNFNYWGPPPPAMPPYYQQPPPQQMNGWGPYPPPQQNGWNAPPPPPPGAQQWHANQWGC 329

Query: 761 KXPXPKRXVVGXQGPP 808
             P  +   VG   PP
Sbjct: 330 PPPVQQVPPVGAVPPP 345


>L02106-1|AAA99873.1|  471|Drosophila melanogaster ribonucleoprotein
           protein.
          Length = 471

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 19/76 (25%), Positives = 25/76 (32%), Gaps = 1/76 (1%)
 Frame = +2

Query: 584 PPGXGGWXXGPXSVPXXXNPXPPX-FRLXXPVSPPPRXXXRXXPKPGGXPRKXLLNQXAX 760
           PP    W   P ++P      PP       P  PP +      P P    ++   NQ   
Sbjct: 270 PPNFNYWGPPPPAMPPYYQQPPPQQMNGWGPYPPPQQNGWNAPPPPPPGAQQWHANQWGC 329

Query: 761 KXPXPKRXVVGXQGPP 808
             P  +   VG   PP
Sbjct: 330 PPPVQQVPPVGAVPPP 345


>BT010254-1|AAQ23572.1|  196|Drosophila melanogaster RE34656p
           protein.
          Length = 196

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 19/76 (25%), Positives = 25/76 (32%), Gaps = 1/76 (1%)
 Frame = +2

Query: 584 PPGXGGWXXGPXSVPXXXNPXPPX-FRLXXPVSPPPRXXXRXXPKPGGXPRKXLLNQXAX 760
           PP    W   P ++P      PP       P  PP +      P P    ++   NQ   
Sbjct: 32  PPNFNYWGPPPPAMPPYYQQPPPQQMNGWGPYPPPQQNGWNAPPPPPPGAQQWHANQWGC 91

Query: 761 KXPXPKRXVVGXQGPP 808
             P  +   VG   PP
Sbjct: 92  PPPVQQVPPVGAVPPP 107


>BT001320-1|AAN71075.1|  434|Drosophila melanogaster AT15526p
           protein.
          Length = 434

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 19/76 (25%), Positives = 25/76 (32%), Gaps = 1/76 (1%)
 Frame = +2

Query: 584 PPGXGGWXXGPXSVPXXXNPXPPX-FRLXXPVSPPPRXXXRXXPKPGGXPRKXLLNQXAX 760
           PP    W   P ++P      PP       P  PP +      P P    ++   NQ   
Sbjct: 270 PPNFNYWGPPPPAMPPYYQQPPPQQMNGWGPYPPPQQNGWNAPPPPPPGAQQWHANQWGC 329

Query: 761 KXPXPKRXVVGXQGPP 808
             P  +   VG   PP
Sbjct: 330 PPPVQQVPPVGAVPPP 345


>AE014297-4014|AAX53003.1|  434|Drosophila melanogaster CG6354-PE,
           isoform E protein.
          Length = 434

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 19/76 (25%), Positives = 25/76 (32%), Gaps = 1/76 (1%)
 Frame = +2

Query: 584 PPGXGGWXXGPXSVPXXXNPXPPX-FRLXXPVSPPPRXXXRXXPKPGGXPRKXLLNQXAX 760
           PP    W   P ++P      PP       P  PP +      P P    ++   NQ   
Sbjct: 270 PPNFNYWGPPPPAMPPYYQQPPPQQMNGWGPYPPPQQNGWNAPPPPPPGAQQWHANQWGC 329

Query: 761 KXPXPKRXVVGXQGPP 808
             P  +   VG   PP
Sbjct: 330 PPPVQQVPPVGAVPPP 345


>AE014297-4013|AAX53002.1|  434|Drosophila melanogaster CG6354-PD,
           isoform D protein.
          Length = 434

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 19/76 (25%), Positives = 25/76 (32%), Gaps = 1/76 (1%)
 Frame = +2

Query: 584 PPGXGGWXXGPXSVPXXXNPXPPX-FRLXXPVSPPPRXXXRXXPKPGGXPRKXLLNQXAX 760
           PP    W   P ++P      PP       P  PP +      P P    ++   NQ   
Sbjct: 270 PPNFNYWGPPPPAMPPYYQQPPPQQMNGWGPYPPPQQNGWNAPPPPPPGAQQWHANQWGC 329

Query: 761 KXPXPKRXVVGXQGPP 808
             P  +   VG   PP
Sbjct: 330 PPPVQQVPPVGAVPPP 345


>AE014297-4012|AAX53001.1|  471|Drosophila melanogaster CG6354-PI,
           isoform I protein.
          Length = 471

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 19/76 (25%), Positives = 25/76 (32%), Gaps = 1/76 (1%)
 Frame = +2

Query: 584 PPGXGGWXXGPXSVPXXXNPXPPX-FRLXXPVSPPPRXXXRXXPKPGGXPRKXLLNQXAX 760
           PP    W   P ++P      PP       P  PP +      P P    ++   NQ   
Sbjct: 270 PPNFNYWGPPPPAMPPYYQQPPPQQMNGWGPYPPPQQNGWNAPPPPPPGAQQWHANQWGC 329

Query: 761 KXPXPKRXVVGXQGPP 808
             P  +   VG   PP
Sbjct: 330 PPPVQQVPPVGAVPPP 345


>AE014297-4011|AAX53000.1|  471|Drosophila melanogaster CG6354-PH,
           isoform H protein.
          Length = 471

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 19/76 (25%), Positives = 25/76 (32%), Gaps = 1/76 (1%)
 Frame = +2

Query: 584 PPGXGGWXXGPXSVPXXXNPXPPX-FRLXXPVSPPPRXXXRXXPKPGGXPRKXLLNQXAX 760
           PP    W   P ++P      PP       P  PP +      P P    ++   NQ   
Sbjct: 270 PPNFNYWGPPPPAMPPYYQQPPPQQMNGWGPYPPPQQNGWNAPPPPPPGAQQWHANQWGC 329

Query: 761 KXPXPKRXVVGXQGPP 808
             P  +   VG   PP
Sbjct: 330 PPPVQQVPPVGAVPPP 345


>AE014297-4010|AAX52999.1|  471|Drosophila melanogaster CG6354-PF,
           isoform F protein.
          Length = 471

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 19/76 (25%), Positives = 25/76 (32%), Gaps = 1/76 (1%)
 Frame = +2

Query: 584 PPGXGGWXXGPXSVPXXXNPXPPX-FRLXXPVSPPPRXXXRXXPKPGGXPRKXLLNQXAX 760
           PP    W   P ++P      PP       P  PP +      P P    ++   NQ   
Sbjct: 270 PPNFNYWGPPPPAMPPYYQQPPPQQMNGWGPYPPPQQNGWNAPPPPPPGAQQWHANQWGC 329

Query: 761 KXPXPKRXVVGXQGPP 808
             P  +   VG   PP
Sbjct: 330 PPPVQQVPPVGAVPPP 345


>AE014297-4009|AAF56633.1|  471|Drosophila melanogaster CG6354-PB,
           isoform B protein.
          Length = 471

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 19/76 (25%), Positives = 25/76 (32%), Gaps = 1/76 (1%)
 Frame = +2

Query: 584 PPGXGGWXXGPXSVPXXXNPXPPX-FRLXXPVSPPPRXXXRXXPKPGGXPRKXLLNQXAX 760
           PP    W   P ++P      PP       P  PP +      P P    ++   NQ   
Sbjct: 270 PPNFNYWGPPPPAMPPYYQQPPPQQMNGWGPYPPPQQNGWNAPPPPPPGAQQWHANQWGC 329

Query: 761 KXPXPKRXVVGXQGPP 808
             P  +   VG   PP
Sbjct: 330 PPPVQQVPPVGAVPPP 345


>AE014297-4008|AAX52998.1|  465|Drosophila melanogaster CG6354-PG,
           isoform G protein.
          Length = 465

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 19/76 (25%), Positives = 25/76 (32%), Gaps = 1/76 (1%)
 Frame = +2

Query: 584 PPGXGGWXXGPXSVPXXXNPXPPX-FRLXXPVSPPPRXXXRXXPKPGGXPRKXLLNQXAX 760
           PP    W   P ++P      PP       P  PP +      P P    ++   NQ   
Sbjct: 270 PPNFNYWGPPPPAMPPYYQQPPPQQMNGWGPYPPPQQNGWNAPPPPPPGAQQWHANQWGC 329

Query: 761 KXPXPKRXVVGXQGPP 808
             P  +   VG   PP
Sbjct: 330 PPPVQQVPPVGAVPPP 345


>AE014297-4007|AAX52997.1|  465|Drosophila melanogaster CG6354-PC,
           isoform C protein.
          Length = 465

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 19/76 (25%), Positives = 25/76 (32%), Gaps = 1/76 (1%)
 Frame = +2

Query: 584 PPGXGGWXXGPXSVPXXXNPXPPX-FRLXXPVSPPPRXXXRXXPKPGGXPRKXLLNQXAX 760
           PP    W   P ++P      PP       P  PP +      P P    ++   NQ   
Sbjct: 270 PPNFNYWGPPPPAMPPYYQQPPPQQMNGWGPYPPPQQNGWNAPPPPPPGAQQWHANQWGC 329

Query: 761 KXPXPKRXVVGXQGPP 808
             P  +   VG   PP
Sbjct: 330 PPPVQQVPPVGAVPPP 345


>AE014297-4006|AAN14092.1|  465|Drosophila melanogaster CG6354-PA,
           isoform A protein.
          Length = 465

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 19/76 (25%), Positives = 25/76 (32%), Gaps = 1/76 (1%)
 Frame = +2

Query: 584 PPGXGGWXXGPXSVPXXXNPXPPX-FRLXXPVSPPPRXXXRXXPKPGGXPRKXLLNQXAX 760
           PP    W   P ++P      PP       P  PP +      P P    ++   NQ   
Sbjct: 270 PPNFNYWGPPPPAMPPYYQQPPPQQMNGWGPYPPPQQNGWNAPPPPPPGAQQWHANQWGC 329

Query: 761 KXPXPKRXVVGXQGPP 808
             P  +   VG   PP
Sbjct: 330 PPPVQQVPPVGAVPPP 345


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,027,125
Number of Sequences: 53049
Number of extensions: 354348
Number of successful extensions: 653
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 620
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4505424660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)