Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_D24
         (884 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81524-1|AAB82735.1|   79|Homo sapiens cytochrome c oxidase subu...    39   0.028
M83186-1|AAA52166.1|   79|Homo sapiens cytochrome c oxidase subu...    39   0.028
CR542120-1|CAG46917.1|   79|Homo sapiens COX7A1 protein.               39   0.028
BT006924-1|AAP35570.1|   79|Homo sapiens cytochrome c oxidase su...    39   0.028
BC002757-1|AAH02757.1|   79|Homo sapiens cytochrome c oxidase su...    39   0.028
AF127789-1|AAF72747.1|   79|Homo sapiens cytochrome c oxidase po...    39   0.028
AF037372-1|AAB92616.1|   79|Homo sapiens cytochrome oxidase subu...    39   0.028
AC002984-2|AAB81547.1|   79|Homo sapiens COXK_HUMAN protein.           39   0.028
X15822-1|CAA33820.1|   83|Homo sapiens protein ( Human COX VIIa-...    33   1.4  
CR542125-1|CAG46922.1|   83|Homo sapiens COX7A2 protein.               33   1.4  
CR407646-1|CAG28574.1|   83|Homo sapiens COX7A2 protein.               33   1.4  
BC133654-1|AAI33655.1|   83|Homo sapiens COX7A2 protein protein.       33   1.4  
BC101828-1|AAI01829.1|   83|Homo sapiens cytochrome c oxidase su...    33   1.4  
BC101826-1|AAI01827.1|   83|Homo sapiens cytochrome c oxidase su...    33   1.4  
BC100854-1|AAI00855.1|   83|Homo sapiens cytochrome c oxidase su...    33   1.4  
BC100853-1|AAI00854.1|   83|Homo sapiens cytochrome c oxidase su...    33   1.4  
BC100852-1|AAI00853.1|   83|Homo sapiens cytochrome c oxidase su...    33   1.4  
AL080250-3|CAI19899.1|  115|Homo sapiens cytochrome c oxidase su...    33   1.4  
AF134406-1|AAF61396.1|   83|Homo sapiens cytochrome-c oxidase su...    33   1.4  
AC004544-1|AAC12952.1|  106|Homo sapiens WUGSC:H_RG162B04.1 prot...    31   4.2  

>U81524-1|AAB82735.1|   79|Homo sapiens cytochrome c oxidase subunit
           VIIa-M protein.
          Length = 79

 Score = 38.7 bits (86), Expect = 0.028
 Identities = 14/21 (66%), Positives = 19/21 (90%)
 Frame = +3

Query: 357 IRRKQELFQRDNDLPVFLKGG 419
           +R KQ+LFQ DND+P++LKGG
Sbjct: 26  VREKQKLFQEDNDIPLYLKGG 46


>M83186-1|AAA52166.1|   79|Homo sapiens cytochrome c oxidase subunit
           VIIa protein.
          Length = 79

 Score = 38.7 bits (86), Expect = 0.028
 Identities = 14/21 (66%), Positives = 19/21 (90%)
 Frame = +3

Query: 357 IRRKQELFQRDNDLPVFLKGG 419
           +R KQ+LFQ DND+P++LKGG
Sbjct: 26  VREKQKLFQEDNDIPLYLKGG 46


>CR542120-1|CAG46917.1|   79|Homo sapiens COX7A1 protein.
          Length = 79

 Score = 38.7 bits (86), Expect = 0.028
 Identities = 14/21 (66%), Positives = 19/21 (90%)
 Frame = +3

Query: 357 IRRKQELFQRDNDLPVFLKGG 419
           +R KQ+LFQ DND+P++LKGG
Sbjct: 26  VREKQKLFQEDNDIPLYLKGG 46


>BT006924-1|AAP35570.1|   79|Homo sapiens cytochrome c oxidase
           subunit VIIa polypeptide 1 (muscle) protein.
          Length = 79

 Score = 38.7 bits (86), Expect = 0.028
 Identities = 14/21 (66%), Positives = 19/21 (90%)
 Frame = +3

Query: 357 IRRKQELFQRDNDLPVFLKGG 419
           +R KQ+LFQ DND+P++LKGG
Sbjct: 26  VREKQKLFQEDNDIPLYLKGG 46


>BC002757-1|AAH02757.1|   79|Homo sapiens cytochrome c oxidase
           subunit VIIa polypeptide 1 (muscle) protein.
          Length = 79

 Score = 38.7 bits (86), Expect = 0.028
 Identities = 14/21 (66%), Positives = 19/21 (90%)
 Frame = +3

Query: 357 IRRKQELFQRDNDLPVFLKGG 419
           +R KQ+LFQ DND+P++LKGG
Sbjct: 26  VREKQKLFQEDNDIPLYLKGG 46


>AF127789-1|AAF72747.1|   79|Homo sapiens cytochrome c oxidase
           polypeptide VIIa-heart precursor protein.
          Length = 79

 Score = 38.7 bits (86), Expect = 0.028
 Identities = 14/21 (66%), Positives = 19/21 (90%)
 Frame = +3

Query: 357 IRRKQELFQRDNDLPVFLKGG 419
           +R KQ+LFQ DND+P++LKGG
Sbjct: 26  VREKQKLFQEDNDIPLYLKGG 46


>AF037372-1|AAB92616.1|   79|Homo sapiens cytochrome oxidase subunit
           VIIa-H precursor protein.
          Length = 79

 Score = 38.7 bits (86), Expect = 0.028
 Identities = 14/21 (66%), Positives = 19/21 (90%)
 Frame = +3

Query: 357 IRRKQELFQRDNDLPVFLKGG 419
           +R KQ+LFQ DND+P++LKGG
Sbjct: 26  VREKQKLFQEDNDIPLYLKGG 46


>AC002984-2|AAB81547.1|   79|Homo sapiens COXK_HUMAN protein.
          Length = 79

 Score = 38.7 bits (86), Expect = 0.028
 Identities = 14/21 (66%), Positives = 19/21 (90%)
 Frame = +3

Query: 357 IRRKQELFQRDNDLPVFLKGG 419
           +R KQ+LFQ DND+P++LKGG
Sbjct: 26  VREKQKLFQEDNDIPLYLKGG 46


>X15822-1|CAA33820.1|   83|Homo sapiens protein ( Human COX VIIa-L
           mRNA for liver-specific cytochrome c oxidase (EC  ).
          Length = 83

 Score = 33.1 bits (72), Expect = 1.4
 Identities = 12/23 (52%), Positives = 19/23 (82%)
 Frame = +3

Query: 357 IRRKQELFQRDNDLPVFLKGGPA 425
           +  KQ+LFQ D+++P++LKGG A
Sbjct: 28  VPEKQKLFQEDDEIPLYLKGGVA 50


>CR542125-1|CAG46922.1|   83|Homo sapiens COX7A2 protein.
          Length = 83

 Score = 33.1 bits (72), Expect = 1.4
 Identities = 12/23 (52%), Positives = 19/23 (82%)
 Frame = +3

Query: 357 IRRKQELFQRDNDLPVFLKGGPA 425
           +  KQ+LFQ D+++P++LKGG A
Sbjct: 28  VPEKQKLFQEDDEIPLYLKGGVA 50


>CR407646-1|CAG28574.1|   83|Homo sapiens COX7A2 protein.
          Length = 83

 Score = 33.1 bits (72), Expect = 1.4
 Identities = 12/23 (52%), Positives = 19/23 (82%)
 Frame = +3

Query: 357 IRRKQELFQRDNDLPVFLKGGPA 425
           +  KQ+LFQ D+++P++LKGG A
Sbjct: 28  VPEKQKLFQEDDEIPLYLKGGVA 50


>BC133654-1|AAI33655.1|   83|Homo sapiens COX7A2 protein protein.
          Length = 83

 Score = 33.1 bits (72), Expect = 1.4
 Identities = 12/23 (52%), Positives = 19/23 (82%)
 Frame = +3

Query: 357 IRRKQELFQRDNDLPVFLKGGPA 425
           +  KQ+LFQ D+++P++LKGG A
Sbjct: 28  VPEKQKLFQEDDEIPLYLKGGVA 50


>BC101828-1|AAI01829.1|   83|Homo sapiens cytochrome c oxidase
           subunit VIIa polypeptide 2 (liver) protein.
          Length = 83

 Score = 33.1 bits (72), Expect = 1.4
 Identities = 12/23 (52%), Positives = 19/23 (82%)
 Frame = +3

Query: 357 IRRKQELFQRDNDLPVFLKGGPA 425
           +  KQ+LFQ D+++P++LKGG A
Sbjct: 28  VPEKQKLFQEDDEIPLYLKGGVA 50


>BC101826-1|AAI01827.1|   83|Homo sapiens cytochrome c oxidase
           subunit VIIa polypeptide 2 (liver) protein.
          Length = 83

 Score = 33.1 bits (72), Expect = 1.4
 Identities = 12/23 (52%), Positives = 19/23 (82%)
 Frame = +3

Query: 357 IRRKQELFQRDNDLPVFLKGGPA 425
           +  KQ+LFQ D+++P++LKGG A
Sbjct: 28  VPEKQKLFQEDDEIPLYLKGGVA 50


>BC100854-1|AAI00855.1|   83|Homo sapiens cytochrome c oxidase
           subunit VIIa polypeptide 2 (liver) protein.
          Length = 83

 Score = 33.1 bits (72), Expect = 1.4
 Identities = 12/23 (52%), Positives = 19/23 (82%)
 Frame = +3

Query: 357 IRRKQELFQRDNDLPVFLKGGPA 425
           +  KQ+LFQ D+++P++LKGG A
Sbjct: 28  VPEKQKLFQEDDEIPLYLKGGVA 50


>BC100853-1|AAI00854.1|   83|Homo sapiens cytochrome c oxidase
           subunit VIIa polypeptide 2 (liver) protein.
          Length = 83

 Score = 33.1 bits (72), Expect = 1.4
 Identities = 12/23 (52%), Positives = 19/23 (82%)
 Frame = +3

Query: 357 IRRKQELFQRDNDLPVFLKGGPA 425
           +  KQ+LFQ D+++P++LKGG A
Sbjct: 28  VPEKQKLFQEDDEIPLYLKGGVA 50


>BC100852-1|AAI00853.1|   83|Homo sapiens cytochrome c oxidase
           subunit VIIa polypeptide 2 (liver) protein.
          Length = 83

 Score = 33.1 bits (72), Expect = 1.4
 Identities = 12/23 (52%), Positives = 19/23 (82%)
 Frame = +3

Query: 357 IRRKQELFQRDNDLPVFLKGGPA 425
           +  KQ+LFQ D+++P++LKGG A
Sbjct: 28  VPEKQKLFQEDDEIPLYLKGGVA 50


>AL080250-3|CAI19899.1|  115|Homo sapiens cytochrome c oxidase
           subunit VIIa polypeptide 2 (liver) protein.
          Length = 115

 Score = 33.1 bits (72), Expect = 1.4
 Identities = 12/23 (52%), Positives = 19/23 (82%)
 Frame = +3

Query: 357 IRRKQELFQRDNDLPVFLKGGPA 425
           +  KQ+LFQ D+++P++LKGG A
Sbjct: 60  VPEKQKLFQEDDEIPLYLKGGVA 82


>AF134406-1|AAF61396.1|   83|Homo sapiens cytochrome-c oxidase
           subunit VIIaL precursor protein.
          Length = 83

 Score = 33.1 bits (72), Expect = 1.4
 Identities = 12/23 (52%), Positives = 19/23 (82%)
 Frame = +3

Query: 357 IRRKQELFQRDNDLPVFLKGGPA 425
           +  KQ+LFQ D+++P++LKGG A
Sbjct: 28  VPEKQKLFQEDDEIPLYLKGGVA 50


>AC004544-1|AAC12952.1|  106|Homo sapiens WUGSC:H_RG162B04.1
           protein.
          Length = 106

 Score = 31.5 bits (68), Expect = 4.2
 Identities = 12/23 (52%), Positives = 18/23 (78%)
 Frame = +3

Query: 357 IRRKQELFQRDNDLPVFLKGGPA 425
           +  KQ+LFQ D+ +P++LKGG A
Sbjct: 28  VPEKQKLFQEDDGIPLYLKGGIA 50


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,482,000
Number of Sequences: 237096
Number of extensions: 1326852
Number of successful extensions: 2581
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2581
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11326166088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)