Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_D23
(958 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF020555-1|AAB68848.1| 173|Caenorhabditis elegans lin-22 protein. 57 2e-08
AC024817-57|AAK68522.1| 173|Caenorhabditis elegans Abnormal cel... 57 2e-08
Z81554-3|CAB04505.1| 255|Caenorhabditis elegans Hypothetical pr... 31 0.92
AC024794-1|AAK68497.1| 994|Caenorhabditis elegans Hypothetical ... 30 2.8
AC092690-2|AAK73855.2| 745|Caenorhabditis elegans Hypothetical ... 29 3.7
Z81593-12|CAB04744.1| 1274|Caenorhabditis elegans Hypothetical p... 29 6.5
AL023822-2|CAA19440.1| 1274|Caenorhabditis elegans Hypothetical ... 29 6.5
Z70207-8|CAM33501.1| 835|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z70207-5|CAA94127.2| 914|Caenorhabditis elegans Hypothetical pr... 28 8.6
AF316542-1|AAG50270.1| 914|Caenorhabditis elegans serine/threon... 28 8.6
>AF020555-1|AAB68848.1| 173|Caenorhabditis elegans lin-22 protein.
Length = 173
Score = 56.8 bits (131), Expect = 2e-08
Identities = 30/63 (47%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Frame = +3
Query: 195 AKYKKI-TKPLLERKRRARINRCLDELKDLMVGALEIDDDNLSKLEKADILELTVNHLTK 371
++ KKI KPL+E+KRRARIN+ L +LK +++ + SK EKADILE+ V +L +
Sbjct: 18 SRCKKIKNKPLMEKKRRARINKSLSQLKQILIQDEHKNSIQHSKWEKADILEMAVEYLQQ 77
Query: 372 LHS 380
L S
Sbjct: 78 LRS 80
>AC024817-57|AAK68522.1| 173|Caenorhabditis elegans Abnormal cell
lineage protein 22 protein.
Length = 173
Score = 56.8 bits (131), Expect = 2e-08
Identities = 30/63 (47%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Frame = +3
Query: 195 AKYKKI-TKPLLERKRRARINRCLDELKDLMVGALEIDDDNLSKLEKADILELTVNHLTK 371
++ KKI KPL+E+KRRARIN+ L +LK +++ + SK EKADILE+ V +L +
Sbjct: 18 SRCKKIKNKPLMEKKRRARINKSLSQLKQILIQDEHKNSIQHSKWEKADILEMAVEYLQQ 77
Query: 372 LHS 380
L S
Sbjct: 78 LRS 80
>Z81554-3|CAB04505.1| 255|Caenorhabditis elegans Hypothetical
protein F57G4.6 protein.
Length = 255
Score = 31.5 bits (68), Expect = 0.92
Identities = 15/51 (29%), Positives = 29/51 (56%)
Frame = +3
Query: 210 ITKPLLERKRRARINRCLDELKDLMVGALEIDDDNLSKLEKADILELTVNH 362
+ K L E ++R+ + + +++ +V LE+ D NL L K DIL++ +
Sbjct: 193 LLKELKEGEKRSEVKKKYEDVVGYVVETLEVIDSNLIPLLKHDILKICTKY 243
>AC024794-1|AAK68497.1| 994|Caenorhabditis elegans Hypothetical
protein Y48G1BM.5 protein.
Length = 994
Score = 29.9 bits (64), Expect = 2.8
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Frame = +3
Query: 201 YKKITKPLLERKRRARINRCLDEL-KDLMVGALEIDDDNLSKLEKADILELTVNHLTKLH 377
YK +T+ L+E I ++E+ KD+ A + D + + +AD ELT + +
Sbjct: 802 YKDLTQYLVEANSLPDI---IEEMFKDVAEKAKDTDLKDYMQDYQADYTELTPRNFIRPR 858
Query: 378 SPKDPVLEAKKFQAGFGQCAAEACRFIMSVPDLDANVSQNLIS 506
DP++ KK CA + R ++ V D + +NL++
Sbjct: 859 RADDPIVSLKKHLE--DNCAEDWRRTLVDV-QRDRKLKENLLN 898
>AC092690-2|AAK73855.2| 745|Caenorhabditis elegans Hypothetical
protein BE0003N10.1 protein.
Length = 745
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/78 (24%), Positives = 32/78 (41%)
Frame = +3
Query: 177 LRLSKTAKYKKITKPLLERKRRARINRCLDELKDLMVGALEIDDDNLSKLEKADILELTV 356
LR+++TA+ P E R A +N + K +E+D S L++
Sbjct: 173 LRVARTARGDFHVNPTQEELREASLNLIVAMRKHEKTVMIELDGRESSAEHLEHALDVAF 232
Query: 357 NHLTKLHSPKDPVLEAKK 410
H+ KLH + + K
Sbjct: 233 RHVAKLHEAMEQLTAEPK 250
>Z81593-12|CAB04744.1| 1274|Caenorhabditis elegans Hypothetical
protein Y102A5A.1 protein.
Length = 1274
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 246 RINRCLDELKDLMVGALEIDDDNLSKLEKA 335
R C D +KDL G + ++DD+ +K+ +A
Sbjct: 21 RFMACNDLMKDLQTGTIALEDDSTAKVIRA 50
>AL023822-2|CAA19440.1| 1274|Caenorhabditis elegans Hypothetical
protein Y102A5A.1 protein.
Length = 1274
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 246 RINRCLDELKDLMVGALEIDDDNLSKLEKA 335
R C D +KDL G + ++DD+ +K+ +A
Sbjct: 21 RFMACNDLMKDLQTGTIALEDDSTAKVIRA 50
>Z70207-8|CAM33501.1| 835|Caenorhabditis elegans Hypothetical
protein F15A2.6b protein.
Length = 835
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +3
Query: 237 RRARINRCLDELKDLMVGALEIDDDNLSKL 326
R+A + C L L+VGAL DDDNL L
Sbjct: 223 RKADVWSCGVILYALLVGALPFDDDNLRNL 252
>Z70207-5|CAA94127.2| 914|Caenorhabditis elegans Hypothetical
protein F15A2.6a protein.
Length = 914
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +3
Query: 237 RRARINRCLDELKDLMVGALEIDDDNLSKL 326
R+A + C L L+VGAL DDDNL L
Sbjct: 223 RKADVWSCGVILYALLVGALPFDDDNLRNL 252
>AF316542-1|AAG50270.1| 914|Caenorhabditis elegans serine/threonine
kinase SAD-1 protein.
Length = 914
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +3
Query: 237 RRARINRCLDELKDLMVGALEIDDDNLSKL 326
R+A + C L L+VGAL DDDNL L
Sbjct: 223 RKADVWSCGVILYALLVGALPFDDDNLRNL 252
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,207,067
Number of Sequences: 27780
Number of extensions: 291208
Number of successful extensions: 832
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 832
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2486134266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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