Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_D23
         (958 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    28   0.11 
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   4.1  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   9.4  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   9.4  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     22   9.4  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    22   9.4  

>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 28.3 bits (60), Expect = 0.11
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +3

Query: 162 RCRTRLRLSKTAKYKKITKPLLERKRRARINRCLDELKDLM 284
           R  T+   +K ++  + T   LE+ RRA +  CL++LK L+
Sbjct: 35  RTVTKRPKTKKSQGSRTTHNELEKNRRAHLRNCLEKLKVLV 75


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 23.0 bits (47), Expect = 4.1
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +3

Query: 297 EIDDDNLSKLEKADILELTVNHLTKLHSPKDPVLEA 404
           E+ +D +  +       +TVN LTKLH P D V+ A
Sbjct: 501 ELGNDTVIVMMNFSKNPVTVN-LTKLHPPADLVVYA 535


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.8 bits (44), Expect = 9.4
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 438 PHTVRSPPETSSLPEPDPSG 379
           PH + S P   SLP+  P G
Sbjct: 615 PHQIFSFPARLSLPKGQPQG 634


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.8 bits (44), Expect = 9.4
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = +3

Query: 435 AAEACRFIMSVPDLDANVSQNLISHLSRLITAQPLTIQVPERA 563
           A E     +SVP      +   +S+L+ L   QP   Q+P  A
Sbjct: 699 ALELMNRAVSVPQSHQPGAMEQVSYLTSLERTQPTMSQMPPTA 741


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.8 bits (44), Expect = 9.4
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 471 DLDANVSQNLISHLSRLITAQPLT 542
           DLD ++S+NL S LS   + +P T
Sbjct: 533 DLDISLSENLSSGLSISDSTKPET 556


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 9.4
 Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
 Frame = +3

Query: 330 KADILEL-TVNHLTKLHSPKDPVLEAKKFQAGFGQCAAEA 446
           K  + +L T NHL ++  P D  + A   + G    A +A
Sbjct: 154 KLHVFDLKTSNHLKQIEIPHDIAVNATTGKGGLVSLAVQA 193


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,031
Number of Sequences: 438
Number of extensions: 3513
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 31444140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)