Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_D20
         (912 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49128-8|CAA88960.2|  989|Caenorhabditis elegans Hypothetical pr...    33   0.21 
AL021171-6|CAA15960.2|  989|Caenorhabditis elegans Hypothetical ...    33   0.21 
AC024781-2|AAK39328.2|  311|Caenorhabditis elegans Hypothetical ...    29   4.6  
U53344-7|AAM15599.1|  183|Caenorhabditis elegans Hypothetical pr...    29   6.1  
U53344-6|AAK77632.2|  702|Caenorhabditis elegans Hypothetical pr...    29   6.1  
AL137227-10|CAB76717.1|  391|Caenorhabditis elegans Hypothetical...    29   6.1  
AL132848-6|CAB76731.1|  391|Caenorhabditis elegans Hypothetical ...    29   6.1  
AF125971-4|AAD14766.1|  381|Caenorhabditis elegans Hypothetical ...    29   6.1  

>Z49128-8|CAA88960.2|  989|Caenorhabditis elegans Hypothetical
           protein M03C11.8 protein.
          Length = 989

 Score = 33.5 bits (73), Expect = 0.21
 Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
 Frame = +3

Query: 390 KIIKLLQMQRKRKIPKKFDVPQLGLRLLLIIKIHMLLSTLYKPSNYFEKLEGFLSMIHIY 569
           KI K+L ++ K    KK+      L  L  IKIH L       S +    +  L      
Sbjct: 697 KIAKMLCLREKAYADKKWQHVSEDLAWLSDIKIHQLCERFRCTSKFLLNEQLALKSGKCE 756

Query: 570 RLYKYLSEVETKQDFC*IFS---NIINVTRCYLNQQSYNF 680
           +L   L E++ K D   IFS   +++++   YLN + Y++
Sbjct: 757 QLDVMLPEIQKKGDKVLIFSQFTSMLDILEVYLNIRGYSY 796


>AL021171-6|CAA15960.2|  989|Caenorhabditis elegans Hypothetical
           protein M03C11.8 protein.
          Length = 989

 Score = 33.5 bits (73), Expect = 0.21
 Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
 Frame = +3

Query: 390 KIIKLLQMQRKRKIPKKFDVPQLGLRLLLIIKIHMLLSTLYKPSNYFEKLEGFLSMIHIY 569
           KI K+L ++ K    KK+      L  L  IKIH L       S +    +  L      
Sbjct: 697 KIAKMLCLREKAYADKKWQHVSEDLAWLSDIKIHQLCERFRCTSKFLLNEQLALKSGKCE 756

Query: 570 RLYKYLSEVETKQDFC*IFS---NIINVTRCYLNQQSYNF 680
           +L   L E++ K D   IFS   +++++   YLN + Y++
Sbjct: 757 QLDVMLPEIQKKGDKVLIFSQFTSMLDILEVYLNIRGYSY 796


>AC024781-2|AAK39328.2|  311|Caenorhabditis elegans Hypothetical
           protein Y43H11AL.2 protein.
          Length = 311

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -1

Query: 249 ISWFSVVFDCCCFDAFLASLFLLMR 175
           + W +    CCCFDA + S + L R
Sbjct: 265 LPWLAGSLGCCCFDAVIISQYYLYR 289


>U53344-7|AAM15599.1|  183|Caenorhabditis elegans Hypothetical
           protein T07H6.1b protein.
          Length = 183

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 16/61 (26%), Positives = 31/61 (50%)
 Frame = +3

Query: 120 MKRSTEHHLVQKVLFLIYFALEEKAMLKRHQNNNNQKRPKTKRSQKMIKT*STLIKIHIK 299
           MKR+ +  +++K  F     L+   +  +  ++N +  P TKR + M K   T++   +K
Sbjct: 1   MKRTEKSEILEKAAF---HGLDHAFIFSKGYSSNFEISPYTKREETMSKILCTMLTNFVK 57

Query: 300 N 302
           N
Sbjct: 58  N 58


>U53344-6|AAK77632.2|  702|Caenorhabditis elegans Hypothetical
           protein T07H6.1a protein.
          Length = 702

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 16/61 (26%), Positives = 31/61 (50%)
 Frame = +3

Query: 120 MKRSTEHHLVQKVLFLIYFALEEKAMLKRHQNNNNQKRPKTKRSQKMIKT*STLIKIHIK 299
           MKR+ +  +++K  F     L+   +  +  ++N +  P TKR + M K   T++   +K
Sbjct: 520 MKRTEKSEILEKAAF---HGLDHAFIFSKGYSSNFEISPYTKREETMSKILCTMLTNFVK 576

Query: 300 N 302
           N
Sbjct: 577 N 577


>AL137227-10|CAB76717.1|  391|Caenorhabditis elegans Hypothetical
           protein F58D5.3 protein.
          Length = 391

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -3

Query: 448 TSNFFGIFLFRCICRSLIIFRMRFTSENVHYP 353
           +S FF + L  CI   L+I R +F SEN+  P
Sbjct: 8   SSFFFIVILGFCILIYLLILRQKFLSENLENP 39


>AL132848-6|CAB76731.1|  391|Caenorhabditis elegans Hypothetical
           protein F58D5.3 protein.
          Length = 391

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -3

Query: 448 TSNFFGIFLFRCICRSLIIFRMRFTSENVHYP 353
           +S FF + L  CI   L+I R +F SEN+  P
Sbjct: 8   SSFFFIVILGFCILIYLLILRQKFLSENLENP 39


>AF125971-4|AAD14766.1|  381|Caenorhabditis elegans Hypothetical
           protein Y4C6B.3 protein.
          Length = 381

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 18/69 (26%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
 Frame = +3

Query: 291 HIKNTI-IP*RVLLRENIVL*LG*WTFSEVNRILKIIKLLQMQRKRKIPKKFDVPQLGLR 467
           H+K+++ IP R +    +V+ +    F+E++ ++ I     +  +  +  KFD+  +G  
Sbjct: 184 HMKDSMQIPYRKIFTSPVVITVWLCAFTELSTLILIATYAPIYFRNVL--KFDIKMIGFY 241

Query: 468 LLLIIKIHM 494
           L LI+ IH+
Sbjct: 242 LGLILAIHL 250


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,658,695
Number of Sequences: 27780
Number of extensions: 344807
Number of successful extensions: 1074
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1072
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)