Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_D19
         (924 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC068439-1|AAH68439.1|  480|Homo sapiens chromosome 19 open read...   171   2e-42
BC036706-1|AAH36706.1|  471|Homo sapiens C19orf28 protein protein.    146   8e-35
S62035-1|AAB26881.1|  489|Homo sapiens Ras-specific guanine nucl...    32   3.4  
L26584-1|AAA58417.1| 1275|Homo sapiens CDC25 protein.                  32   3.4  
BC040275-1|AAH40275.1| 1181|Homo sapiens RASGRF1 protein protein.      32   3.4  
AB065892-1|BAC06108.1|  347|Homo sapiens seven transmembrane hel...    31   7.8  

>BC068439-1|AAH68439.1|  480|Homo sapiens chromosome 19 open reading
           frame 28 protein.
          Length = 480

 Score =  171 bits (417), Expect = 2e-42
 Identities = 80/158 (50%), Positives = 106/158 (67%), Gaps = 1/158 (0%)
 Frame = +1

Query: 322 SLKLQLGYGIGHVLNDVCASLWFTYFLVYFKLVLEFSNVQSGTLMLVGQMVDALATPFIG 501
           SL  +L Y +GH LND+CAS+WFTY L+Y   V  +S+  +G L+L+GQ+ D L TP +G
Sbjct: 18  SLVARLSYAVGHFLNDLCASMWFTYLLLYLHSVRAYSSRGAGLLLLLGQVADGLCTPLVG 77

Query: 502 YHSDHTDNFWSAKYGRRKLWHLFGTICVVTSFPFIFSECVGC-SLTHRWAXMYYFAAFIV 678
           Y +D   +   A+YG RK WHL GT+CV+ SFPFIFS C+GC + T  WA + Y+  FIV
Sbjct: 78  YEADRAAS-CCARYGPRKAWHLVGTVCVLLSFPFIFSPCLGCGAATPEWAALLYYGPFIV 136

Query: 679 IFQIGWASSAKFRL*A*YPELAXDDPPRTXLTAIRYAF 792
           IFQ GWAS+    L +  PEL  +D  +  LTA+RYAF
Sbjct: 137 IFQFGWASTQISHL-SLIPELVTNDHEKVELTALRYAF 173


>BC036706-1|AAH36706.1|  471|Homo sapiens C19orf28 protein protein.
          Length = 471

 Score =  146 bits (355), Expect = 8e-35
 Identities = 74/158 (46%), Positives = 100/158 (63%), Gaps = 1/158 (0%)
 Frame = +1

Query: 322 SLKLQLGYGIGHVLNDVCASLWFTYFLVYFKLVLEFSNVQSGTLMLVGQMVDALATPFIG 501
           SL  +L Y +GH LND+CAS+WFTY L+Y   V  +S+  +G L+L+GQ+ D L TP +G
Sbjct: 18  SLVARLSYAVGHFLNDLCASMWFTYLLLYLHSVRAYSSRGAGLLLLLGQVADGLCTPLVG 77

Query: 502 YHSDHTDNFWSAKYGRRKLWHLFGTICVVTSFPFIFSECVGC-SLTHRWAXMYYFAAFIV 678
           Y +D   +   A+Y         GT+CV+ SFPFIFS C+GC + T  WA + Y+  FIV
Sbjct: 78  YEADRAAS-CCARY---------GTVCVLLSFPFIFSPCLGCGAATPEWAALLYYGPFIV 127

Query: 679 IFQIGWASSAKFRL*A*YPELAXDDPPRTXLTAIRYAF 792
           IFQ GWAS+    L +  PEL  +D  +  LTA+RYAF
Sbjct: 128 IFQFGWASTQISHL-SLIPELVTNDHEKVELTALRYAF 164


>S62035-1|AAB26881.1|  489|Homo sapiens Ras-specific guanine
           nucleotide-releasing factor protein.
          Length = 489

 Score = 31.9 bits (69), Expect = 3.4
 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +2

Query: 191 YCVKQCKVNNQNSGTQSLVVLRNSDIKQKQESI-KWITNL*IYRQVSNYNWAMELVT 358
           Y +K  K  N  S   +  ++RN DI  +  +I KW+    I R + NYN  +E+ +
Sbjct: 294 YIMKTTKHFNDISNLIASEIIRNEDINARVSAIEKWVAVADICRCLHNYNAVLEITS 350


>L26584-1|AAA58417.1| 1275|Homo sapiens CDC25 protein.
          Length = 1275

 Score = 31.9 bits (69), Expect = 3.4
 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +2

Query: 191  YCVKQCKVNNQNSGTQSLVVLRNSDIKQKQESI-KWITNL*IYRQVSNYNWAMELVT 358
            Y +K  K  N  S   +  ++RN DI  +  +I KW+    I R + NYN  +E+ +
Sbjct: 1080 YIMKTTKHFNDISNLIASEIIRNEDINARVSAIEKWVAVADICRCLHNYNAVLEITS 1136


>BC040275-1|AAH40275.1| 1181|Homo sapiens RASGRF1 protein protein.
          Length = 1181

 Score = 31.9 bits (69), Expect = 3.4
 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +2

Query: 191  YCVKQCKVNNQNSGTQSLVVLRNSDIKQKQESI-KWITNL*IYRQVSNYNWAMELVT 358
            Y +K  K  N  S   +  ++RN DI  +  +I KW+    I R + NYN  +E+ +
Sbjct: 1062 YIMKTTKHFNDISNLIASEIIRNEDINARVSAIEKWVAVADICRCLHNYNAVLEITS 1118


>AB065892-1|BAC06108.1|  347|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 347

 Score = 30.7 bits (66), Expect = 7.8
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = -2

Query: 323 LVDISINSLSILCFLVSVLYHYFLVLLAIV 234
           L+D  ++S+ ILC +V V Y Y  ++L IV
Sbjct: 196 LMDFMLSSMVILCCIVLVAYSYTYIILTIV 225


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,129,564
Number of Sequences: 237096
Number of extensions: 2611007
Number of successful extensions: 4510
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4504
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12047931574
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)