Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_D17
         (940 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0952 - 22981116-22981268,22981930-22981974,22982052-229821...    31   1.0  
06_03_0743 + 24069752-24070483,24071890-24072345                       31   1.0  
06_03_1283 - 28957729-28959258,28959354-28959550,28959824-289600...    29   5.3  
02_03_0220 + 16545571-16545573,16545717-16545818,16545980-165460...    29   5.3  
06_03_0467 - 21066354-21066501,21066831-21066893,21067223-210672...    28   9.3  

>08_02_0952 -
           22981116-22981268,22981930-22981974,22982052-22982153,
           22983262-22983468,22984783-22985042,22985338-22985442,
           22986244-22986247,22986877-22986962,22987022-22987064
          Length = 334

 Score = 31.5 bits (68), Expect = 1.0
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +2

Query: 245 GHDQNHDQSQHEDSHHRTHPVFVHVLALRMSAILHGLVHEF 367
           GH   HD   H  SH  +H   +  L++ +S +L G+V  F
Sbjct: 47  GHSHTHDHQNHNHSHEHSHAHSLEDLSIGLS-VLFGIVFFF 86


>06_03_0743 + 24069752-24070483,24071890-24072345
          Length = 395

 Score = 31.5 bits (68), Expect = 1.0
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 224 LSIVPRVGHDQNHDQSQHEDSHHRTH 301
           LS+ P   HD +H   +H+  HH  H
Sbjct: 65  LSLTPSTTHDDDHHHRRHDQDHHHHH 90


>06_03_1283 -
           28957729-28959258,28959354-28959550,28959824-28960026,
           28960097-28960424,28960524-28960661,28960765-28961020,
           28961529-28961626,28963104-28963367,28964395-28964584
          Length = 1067

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +2

Query: 188 DGHSRSRSSTGNLSIVPRVGHDQNHDQSQHEDSHHR 295
           DG  +S  S    S+     HD +H+ + HE+  H+
Sbjct: 740 DGPCKSMVSCKESSVAKNACHDHHHEHNHHEEPAHK 775


>02_03_0220 +
           16545571-16545573,16545717-16545818,16545980-16546008,
           16549421-16553036
          Length = 1249

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = +2

Query: 170 RVLIDQDGHSRSRSSTGNLSIVPRVGHDQNHDQSQHEDSHHRTHPV 307
           R L    GH+ + SS+G    +PR   ++       E  +HR HPV
Sbjct: 166 RSLASYSGHAIASSSSG----LPRAADEEGDGLRAREGEYHRRHPV 207


>06_03_0467 -
           21066354-21066501,21066831-21066893,21067223-21067291,
           21067666-21067742,21069451-21069558,21070008-21070274,
           21071964-21072607,21073370-21073550,21073688-21073834
          Length = 567

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 191 GHSRSRSSTGNLSIVPRVGHDQNHDQSQHEDSHHRT 298
           G++ S SS    + V R GH Q   Q + E   H+T
Sbjct: 152 GNASSSSSASAAAAVARHGHQQQQQQQRSETRWHKT 187


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,196,081
Number of Sequences: 37544
Number of extensions: 351889
Number of successful extensions: 1029
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1027
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2694390200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)