Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_D16
(914 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA ... 247 7e-66
AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid de... 247 7e-66
Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical pr... 244 9e-65
AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA ... 244 9e-65
Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical pr... 229 3e-60
AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA... 229 3e-60
AF038608-6|AAT92088.1| 312|Caenorhabditis elegans Serpentine re... 31 0.87
U80952-2|AAB38094.1| 309|Caenorhabditis elegans Muscle attachme... 29 4.6
U80952-1|AAU20846.1| 315|Caenorhabditis elegans Muscle attachme... 29 4.6
>AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-7 protein.
Length = 338
Score = 247 bits (605), Expect = 7e-66
Identities = 114/222 (51%), Positives = 156/222 (70%), Gaps = 5/222 (2%)
Frame = +1
Query: 259 VPPSAEKRPWK--IVWRNVILFFILHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGIT 432
V ++K P+K IVWRNV LF LHV G Y +F A W+T++F+ LY+ SG GIT
Sbjct: 33 VQEESKKIPYKMEIVWRNVALFAALHVAAAIGLYELVFHAKWQTAVFSFALYVFSGFGIT 92
Query: 433 AGAHRLWAHKSYKARLPLRILLTIFNTIAFQDAVVDWARDHRMHHKYSETDADPHNATRG 612
AGAHRLW+HKSYKA P+RI L + N IA Q+ +++WARDHR HHK+++TDADPHN TRG
Sbjct: 93 AGAHRLWSHKSYKATTPMRIFLMLLNNIALQNDIIEWARDHRCHHKWTDTDADPHNTTRG 152
Query: 613 FFFSHIGWLLLRKHXEIKAKGHTVDVNDLHNDPILRFQKKYYQILMPLXCFIMPTYVPT- 789
FFF+H+GWLL+RKH ++K G +D++DL +DP+L FQ+K+Y L+ L CFI+PT +P
Sbjct: 153 FFFTHMGWLLVRKHPQVKEHGGKLDLSDLFSDPVLVFQRKHYFPLVILFCFILPTIIPVY 212
Query: 790 LWGETVWNSFYVCAISATYMFSI*LGW--STQXPYXG*QXYD 909
W ET + +FYV A + Y F++ W ++ Y G + YD
Sbjct: 213 FWKETAFIAFYV-AGTFRYCFTLHATWCINSAAHYFGWKPYD 253
>AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid
desaturase protein 7 protein.
Length = 338
Score = 247 bits (605), Expect = 7e-66
Identities = 114/222 (51%), Positives = 156/222 (70%), Gaps = 5/222 (2%)
Frame = +1
Query: 259 VPPSAEKRPWK--IVWRNVILFFILHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGIT 432
V ++K P+K IVWRNV LF LHV G Y +F A W+T++F+ LY+ SG GIT
Sbjct: 33 VQEESKKIPYKMEIVWRNVALFAALHVAAAIGLYELVFHAKWQTAVFSFALYVFSGFGIT 92
Query: 433 AGAHRLWAHKSYKARLPLRILLTIFNTIAFQDAVVDWARDHRMHHKYSETDADPHNATRG 612
AGAHRLW+HKSYKA P+RI L + N IA Q+ +++WARDHR HHK+++TDADPHN TRG
Sbjct: 93 AGAHRLWSHKSYKATTPMRIFLMLLNNIALQNDIIEWARDHRCHHKWTDTDADPHNTTRG 152
Query: 613 FFFSHIGWLLLRKHXEIKAKGHTVDVNDLHNDPILRFQKKYYQILMPLXCFIMPTYVPT- 789
FFF+H+GWLL+RKH ++K G +D++DL +DP+L FQ+K+Y L+ L CFI+PT +P
Sbjct: 153 FFFTHMGWLLVRKHPQVKEHGGKLDLSDLFSDPVLVFQRKHYFPLVILFCFILPTIIPVY 212
Query: 790 LWGETVWNSFYVCAISATYMFSI*LGW--STQXPYXG*QXYD 909
W ET + +FYV A + Y F++ W ++ Y G + YD
Sbjct: 213 FWKETAFIAFYV-AGTFRYCFTLHATWCINSAAHYFGWKPYD 253
>Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical
protein VZK822L.1 protein.
Length = 339
Score = 244 bits (596), Expect = 9e-65
Identities = 113/218 (51%), Positives = 152/218 (69%), Gaps = 5/218 (2%)
Frame = +1
Query: 271 AEKRPWK--IVWRNVILFFILHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGITAGAH 444
++K P+K IVWRNV LF LH G Y +F+A W+T IF LY+ G GITAGAH
Sbjct: 38 SKKIPYKMEIVWRNVALFAALHFAAAIGLYQLIFEAKWQTVIFTFLLYVFGGFGITAGAH 97
Query: 445 RLWAHKSYKARLPLRILLTIFNTIAFQDAVVDWARDHRMHHKYSETDADPHNATRGFFFS 624
RLW+HKSYKA P+RI L I N IA Q+ V++WARDHR HHK+++TDADPHN TRGFFF+
Sbjct: 98 RLWSHKSYKATTPMRIFLMILNNIALQNDVIEWARDHRCHHKWTDTDADPHNTTRGFFFA 157
Query: 625 HIGWLLLRKHXEIKAKGHTVDVNDLHNDPILRFQKKYYQILMPLXCFIMPTYVPT-LWGE 801
H+GWLL+RKH ++K +G +D++DL +DP+L FQ+K+Y L+ L CFI+PT +P W E
Sbjct: 158 HMGWLLVRKHPQVKEQGAKLDMSDLLSDPVLVFQRKHYFPLVILCCFILPTIIPVYFWKE 217
Query: 802 TVWNSFYVCAISATYMFSI*LGW--STQXPYXG*QXYD 909
T + +FY A + Y F++ W ++ Y G + YD
Sbjct: 218 TAFIAFYT-AGTFRYCFTLHATWCINSAAHYFGWKPYD 254
>AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-6 protein.
Length = 339
Score = 244 bits (596), Expect = 9e-65
Identities = 113/218 (51%), Positives = 152/218 (69%), Gaps = 5/218 (2%)
Frame = +1
Query: 271 AEKRPWK--IVWRNVILFFILHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGITAGAH 444
++K P+K IVWRNV LF LH G Y +F+A W+T IF LY+ G GITAGAH
Sbjct: 38 SKKIPYKMEIVWRNVALFAALHFAAAIGLYQLIFEAKWQTVIFTFLLYVFGGFGITAGAH 97
Query: 445 RLWAHKSYKARLPLRILLTIFNTIAFQDAVVDWARDHRMHHKYSETDADPHNATRGFFFS 624
RLW+HKSYKA P+RI L I N IA Q+ V++WARDHR HHK+++TDADPHN TRGFFF+
Sbjct: 98 RLWSHKSYKATTPMRIFLMILNNIALQNDVIEWARDHRCHHKWTDTDADPHNTTRGFFFA 157
Query: 625 HIGWLLLRKHXEIKAKGHTVDVNDLHNDPILRFQKKYYQILMPLXCFIMPTYVPT-LWGE 801
H+GWLL+RKH ++K +G +D++DL +DP+L FQ+K+Y L+ L CFI+PT +P W E
Sbjct: 158 HMGWLLVRKHPQVKEQGAKLDMSDLLSDPVLVFQRKHYFPLVILCCFILPTIIPVYFWKE 217
Query: 802 TVWNSFYVCAISATYMFSI*LGW--STQXPYXG*QXYD 909
T + +FY A + Y F++ W ++ Y G + YD
Sbjct: 218 TAFIAFYT-AGTFRYCFTLHATWCINSAAHYFGWKPYD 254
>Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical
protein W06D12.3 protein.
Length = 333
Score = 229 bits (559), Expect = 3e-60
Identities = 97/210 (46%), Positives = 146/210 (69%), Gaps = 3/210 (1%)
Frame = +1
Query: 289 KIVWRNVILFFILHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGITAGAHRLWAHKSY 468
+IVW+NV LF LH+G + G Y +F+A W T + L+ +G+T GAHRLWAH++Y
Sbjct: 37 EIVWKNVALFVALHIGALVGLYQLVFQAKWATVGWVFLLHTLGSMGVTGGAHRLWAHRAY 96
Query: 469 KARLPLRILLTIFNTIAFQDAVVDWARDHRMHHKYSETDADPHNATRGFFFSHIGWLLLR 648
KA L R+ L + N+IAFQ+ ++DWARDHR HHK+++TDADPH+ RG FF+H+GWLL++
Sbjct: 97 KATLSWRVFLMLINSIAFQNDIIDWARDHRCHHKWTDTDADPHSTNRGMFFAHMGWLLVK 156
Query: 649 KHXEIKAKGHTVDVNDLHNDPILRFQKKYYQILMPLXCFIMPTYVP-TLWGETVWNSFYV 825
KH ++K +G +D++DL+ DP+L FQ+K Y L+ + CF +PT++P LWGE+ + +FY
Sbjct: 157 KHDQLKIQGGKLDLSDLYEDPVLMFQRKNYLPLVGIFCFALPTFIPVVLWGESAFIAFYT 216
Query: 826 CAISATYMFSI*LGW--STQXPYXG*QXYD 909
A+ Y F++ W ++ + G Q YD
Sbjct: 217 AAL-FRYCFTLHATWCINSVSHWVGWQPYD 245
>AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA
fatty acid desaturaseFAT-5 protein.
Length = 333
Score = 229 bits (559), Expect = 3e-60
Identities = 97/210 (46%), Positives = 146/210 (69%), Gaps = 3/210 (1%)
Frame = +1
Query: 289 KIVWRNVILFFILHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGITAGAHRLWAHKSY 468
+IVW+NV LF LH+G + G Y +F+A W T + L+ +G+T GAHRLWAH++Y
Sbjct: 37 EIVWKNVALFVALHIGALVGLYQLVFQAKWATVGWVFLLHTLGSMGVTGGAHRLWAHRAY 96
Query: 469 KARLPLRILLTIFNTIAFQDAVVDWARDHRMHHKYSETDADPHNATRGFFFSHIGWLLLR 648
KA L R+ L + N+IAFQ+ ++DWARDHR HHK+++TDADPH+ RG FF+H+GWLL++
Sbjct: 97 KATLSWRVFLMLINSIAFQNDIIDWARDHRCHHKWTDTDADPHSTNRGMFFAHMGWLLVK 156
Query: 649 KHXEIKAKGHTVDVNDLHNDPILRFQKKYYQILMPLXCFIMPTYVP-TLWGETVWNSFYV 825
KH ++K +G +D++DL+ DP+L FQ+K Y L+ + CF +PT++P LWGE+ + +FY
Sbjct: 157 KHDQLKIQGGKLDLSDLYEDPVLMFQRKNYLPLVGIFCFALPTFIPVVLWGESAFIAFYT 216
Query: 826 CAISATYMFSI*LGW--STQXPYXG*QXYD 909
A+ Y F++ W ++ + G Q YD
Sbjct: 217 AAL-FRYCFTLHATWCINSVSHWVGWQPYD 245
>AF038608-6|AAT92088.1| 312|Caenorhabditis elegans Serpentine
receptor, class z protein82 protein.
Length = 312
Score = 31.5 bits (68), Expect = 0.87
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 6/52 (11%)
Frame = +1
Query: 721 FQKKYYQI--LMPLXCF----IMPTYVPTLWGETVWNSFYVCAISATYMFSI 858
FQK++++ L L CF IM Y PT+W ++ W +F + ++++ + I
Sbjct: 142 FQKQFFKYIRLFYLICFGTELIMYFYSPTIWSKSRWTTFELYSVASAIVLYI 193
>U80952-2|AAB38094.1| 309|Caenorhabditis elegans Muscle attachment
abnormal protein1, isoform a protein.
Length = 309
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 175 MPPQRKQEASWVLYETDANDLPEDAPPHVPPSAEKRP 285
+PP +A + + +P +PPH PPS E P
Sbjct: 66 LPPTPHFQAPFSPHPPPVQQVPSYSPPHAPPSYETYP 102
>U80952-1|AAU20846.1| 315|Caenorhabditis elegans Muscle attachment
abnormal protein1, isoform b protein.
Length = 315
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 175 MPPQRKQEASWVLYETDANDLPEDAPPHVPPSAEKRP 285
+PP +A + + +P +PPH PPS E P
Sbjct: 72 LPPTPHFQAPFSPHPPPVQQVPSYSPPHAPPSYETYP 108
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,003,009
Number of Sequences: 27780
Number of extensions: 559137
Number of successful extensions: 1631
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1621
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -