Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_D15
(907 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U32169-3|AAC50215.1| 1629|Homo sapiens Pro-a2(XI) protein. 32 3.3
U32169-2|AAC50213.1| 1650|Homo sapiens Pro-a2(XI) protein. 32 3.3
U32169-1|AAC50214.1| 1736|Homo sapiens Pro-a2(XI) protein. 32 3.3
BX248309-2|CAM26006.1| 596|Homo sapiens collagen, type XI, alph... 32 3.3
BX248309-1|CAM26005.1| 1622|Homo sapiens collagen, type XI, alph... 32 3.3
AL845446-3|CAI95551.1| 1650|Homo sapiens collagen, type XI, alph... 32 3.3
AL844527-6|CAI41834.1| 1650|Homo sapiens collagen, type XI, alph... 32 3.3
AL844527-4|CAM25783.1| 624|Homo sapiens collagen, type XI, alph... 32 3.3
AL662824-17|CAM24941.1| 624|Homo sapiens collagen, type XI, alp... 32 3.3
AL662824-16|CAI17611.2| 1650|Homo sapiens collagen, type XI, alp... 32 3.3
AL645940-3|CAM25429.1| 624|Homo sapiens collagen type XI alpha ... 32 3.3
AL645940-2|CAI18063.2| 1650|Homo sapiens collagen type XI alpha ... 32 3.3
AL031228-16|CAA20240.1| 1736|Homo sapiens collagen type XI alpha... 32 3.3
AL031228-15|CAI95623.1| 1650|Homo sapiens collagen type XI alpha... 32 3.3
>U32169-3|AAC50215.1| 1629|Homo sapiens Pro-a2(XI) protein.
Length = 1629
Score = 31.9 bits (69), Expect = 3.3
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -2
Query: 795 GXYGERRHASPXGRKGGQ-VSXKSGRXGXXQXXXADGARGAPGE 667
G GE P G +G Q ++ G+ G ADGARG PG+
Sbjct: 401 GLKGESGDLGPQGPRGPQGLTGSLGKAGRRGRAGADGARGMPGD 444
Score = 31.5 bits (68), Expect = 4.3
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -2
Query: 801 QAGXYGERRHASPXGRKGGQVSXKSGRXGXXQXXXADGARGAPGER 664
++G GER P G++G + + +G+ G DG G PGER
Sbjct: 726 KSGPRGERGPTGPRGQRGPRGA--TGKSGAKGTSGGDGPHGPPGER 769
>U32169-2|AAC50213.1| 1650|Homo sapiens Pro-a2(XI) protein.
Length = 1650
Score = 31.9 bits (69), Expect = 3.3
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -2
Query: 795 GXYGERRHASPXGRKGGQ-VSXKSGRXGXXQXXXADGARGAPGE 667
G GE P G +G Q ++ G+ G ADGARG PG+
Sbjct: 422 GLKGESGDLGPQGPRGPQGLTGSLGKAGRRGRAGADGARGMPGD 465
Score = 31.5 bits (68), Expect = 4.3
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -2
Query: 801 QAGXYGERRHASPXGRKGGQVSXKSGRXGXXQXXXADGARGAPGER 664
++G GER P G++G + + +G+ G DG G PGER
Sbjct: 747 KSGPRGERGPTGPRGQRGPRGA--TGKSGAKGTSGGDGPHGPPGER 790
>U32169-1|AAC50214.1| 1736|Homo sapiens Pro-a2(XI) protein.
Length = 1736
Score = 31.9 bits (69), Expect = 3.3
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -2
Query: 795 GXYGERRHASPXGRKGGQ-VSXKSGRXGXXQXXXADGARGAPGE 667
G GE P G +G Q ++ G+ G ADGARG PG+
Sbjct: 508 GLKGESGDLGPQGPRGPQGLTGSLGKAGRRGRAGADGARGMPGD 551
Score = 31.5 bits (68), Expect = 4.3
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -2
Query: 801 QAGXYGERRHASPXGRKGGQVSXKSGRXGXXQXXXADGARGAPGER 664
++G GER P G++G + + +G+ G DG G PGER
Sbjct: 833 KSGPRGERGPTGPRGQRGPRGA--TGKSGAKGTSGGDGPHGPPGER 876
>BX248309-2|CAM26006.1| 596|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 596
Score = 31.9 bits (69), Expect = 3.3
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -2
Query: 795 GXYGERRHASPXGRKGGQ-VSXKSGRXGXXQXXXADGARGAPGE 667
G GE P G +G Q ++ G+ G ADGARG PG+
Sbjct: 480 GLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARGMPGD 523
>BX248309-1|CAM26005.1| 1622|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1622
Score = 31.9 bits (69), Expect = 3.3
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -2
Query: 795 GXYGERRHASPXGRKGGQ-VSXKSGRXGXXQXXXADGARGAPGE 667
G GE P G +G Q ++ G+ G ADGARG PG+
Sbjct: 394 GLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARGMPGD 437
Score = 31.5 bits (68), Expect = 4.3
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -2
Query: 801 QAGXYGERRHASPXGRKGGQVSXKSGRXGXXQXXXADGARGAPGER 664
++G GER P G++G + + +G+ G DG G PGER
Sbjct: 719 KSGPRGERGPTGPRGQRGPRGA--TGKSGAKGTSGGDGPHGPPGER 762
>AL845446-3|CAI95551.1| 1650|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1650
Score = 31.9 bits (69), Expect = 3.3
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -2
Query: 795 GXYGERRHASPXGRKGGQ-VSXKSGRXGXXQXXXADGARGAPGE 667
G GE P G +G Q ++ G+ G ADGARG PG+
Sbjct: 422 GLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARGMPGD 465
Score = 31.5 bits (68), Expect = 4.3
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -2
Query: 801 QAGXYGERRHASPXGRKGGQVSXKSGRXGXXQXXXADGARGAPGER 664
++G GER P G++G + + +G+ G DG G PGER
Sbjct: 747 KSGPRGERGPTGPRGQRGPRGA--TGKSGAKGTSGGDGPHGPPGER 790
>AL844527-6|CAI41834.1| 1650|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1650
Score = 31.9 bits (69), Expect = 3.3
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -2
Query: 795 GXYGERRHASPXGRKGGQ-VSXKSGRXGXXQXXXADGARGAPGE 667
G GE P G +G Q ++ G+ G ADGARG PG+
Sbjct: 422 GLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARGMPGD 465
Score = 31.5 bits (68), Expect = 4.3
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -2
Query: 801 QAGXYGERRHASPXGRKGGQVSXKSGRXGXXQXXXADGARGAPGER 664
++G GER P G++G + + +G+ G DG G PGER
Sbjct: 747 KSGPRGERGPTGPRGQRGPRGA--TGKSGAKGTSGGDGPHGPPGER 790
>AL844527-4|CAM25783.1| 624|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 624
Score = 31.9 bits (69), Expect = 3.3
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -2
Query: 795 GXYGERRHASPXGRKGGQ-VSXKSGRXGXXQXXXADGARGAPGE 667
G GE P G +G Q ++ G+ G ADGARG PG+
Sbjct: 508 GLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARGMPGD 551
>AL662824-17|CAM24941.1| 624|Homo sapiens collagen, type XI, alpha
2 protein.
Length = 624
Score = 31.9 bits (69), Expect = 3.3
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -2
Query: 795 GXYGERRHASPXGRKGGQ-VSXKSGRXGXXQXXXADGARGAPGE 667
G GE P G +G Q ++ G+ G ADGARG PG+
Sbjct: 508 GLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARGMPGD 551
>AL662824-16|CAI17611.2| 1650|Homo sapiens collagen, type XI, alpha
2 protein.
Length = 1650
Score = 31.9 bits (69), Expect = 3.3
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -2
Query: 795 GXYGERRHASPXGRKGGQ-VSXKSGRXGXXQXXXADGARGAPGE 667
G GE P G +G Q ++ G+ G ADGARG PG+
Sbjct: 422 GLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARGMPGD 465
Score = 31.5 bits (68), Expect = 4.3
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -2
Query: 801 QAGXYGERRHASPXGRKGGQVSXKSGRXGXXQXXXADGARGAPGER 664
++G GER P G++G + + +G+ G DG G PGER
Sbjct: 747 KSGPRGERGPTGPRGQRGPRGA--TGKSGAKGTSGGDGPHGPPGER 790
>AL645940-3|CAM25429.1| 624|Homo sapiens collagen type XI alpha 2
protein.
Length = 624
Score = 31.9 bits (69), Expect = 3.3
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -2
Query: 795 GXYGERRHASPXGRKGGQ-VSXKSGRXGXXQXXXADGARGAPGE 667
G GE P G +G Q ++ G+ G ADGARG PG+
Sbjct: 508 GLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARGMPGD 551
>AL645940-2|CAI18063.2| 1650|Homo sapiens collagen type XI alpha 2
protein.
Length = 1650
Score = 31.9 bits (69), Expect = 3.3
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -2
Query: 795 GXYGERRHASPXGRKGGQ-VSXKSGRXGXXQXXXADGARGAPGE 667
G GE P G +G Q ++ G+ G ADGARG PG+
Sbjct: 422 GLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARGMPGD 465
Score = 31.5 bits (68), Expect = 4.3
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -2
Query: 801 QAGXYGERRHASPXGRKGGQVSXKSGRXGXXQXXXADGARGAPGER 664
++G GER P G++G + + +G+ G DG G PGER
Sbjct: 747 KSGPRGERGPTGPRGQRGPRGA--TGKSGAKGTSGGDGPHGPPGER 790
>AL031228-16|CAA20240.1| 1736|Homo sapiens collagen type XI alpha 2
protein.
Length = 1736
Score = 31.9 bits (69), Expect = 3.3
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -2
Query: 795 GXYGERRHASPXGRKGGQ-VSXKSGRXGXXQXXXADGARGAPGE 667
G GE P G +G Q ++ G+ G ADGARG PG+
Sbjct: 508 GLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARGMPGD 551
Score = 31.5 bits (68), Expect = 4.3
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -2
Query: 801 QAGXYGERRHASPXGRKGGQVSXKSGRXGXXQXXXADGARGAPGER 664
++G GER P G++G + + +G+ G DG G PGER
Sbjct: 833 KSGPRGERGPTGPRGQRGPRGA--TGKSGAKGTSGGDGPHGPPGER 876
>AL031228-15|CAI95623.1| 1650|Homo sapiens collagen type XI alpha 2
protein.
Length = 1650
Score = 31.9 bits (69), Expect = 3.3
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -2
Query: 795 GXYGERRHASPXGRKGGQ-VSXKSGRXGXXQXXXADGARGAPGE 667
G GE P G +G Q ++ G+ G ADGARG PG+
Sbjct: 422 GLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARGMPGD 465
Score = 31.5 bits (68), Expect = 4.3
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -2
Query: 801 QAGXYGERRHASPXGRKGGQVSXKSGRXGXXQXXXADGARGAPGER 664
++G GER P G++G + + +G+ G DG G PGER
Sbjct: 747 KSGPRGERGPTGPRGQRGPRGA--TGKSGAKGTSGGDGPHGPPGER 790
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,628,120
Number of Sequences: 237096
Number of extensions: 1708209
Number of successful extensions: 3514
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3514
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11714809042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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