Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_D15
         (907 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69662-1|CAA93499.1|  359|Caenorhabditis elegans Hypothetical pr...    30   2.6  
Z71178-1|CAA94874.1|  297|Caenorhabditis elegans Hypothetical pr...    29   4.6  
Z81567-3|CAB04587.1|  301|Caenorhabditis elegans Hypothetical pr...    28   8.0  

>Z69662-1|CAA93499.1|  359|Caenorhabditis elegans Hypothetical
           protein F56D5.1 protein.
          Length = 359

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 19/44 (43%), Positives = 20/44 (45%)
 Frame = -2

Query: 795 GXYGERRHASPXGRKGGQVSXKSGRXGXXQXXXADGARGAPGER 664
           G  GER      GRKG   S KSG  G      A GA+G  G R
Sbjct: 149 GAQGERGLPGNAGRKGK--SGKSGHPGQPGGIGASGAKGPTGTR 190


>Z71178-1|CAA94874.1|  297|Caenorhabditis elegans Hypothetical
           protein B0024.1 protein.
          Length = 297

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 16/44 (36%), Positives = 18/44 (40%)
 Frame = -2

Query: 795 GXYGERRHASPXGRKGGQVSXKSGRXGXXQXXXADGARGAPGER 664
           G  G+  H    GR+G       GR G      A G  G PGER
Sbjct: 201 GNPGQPGHPGKDGRRGHGSPGAPGRAGQPGRQGAPGNPGRPGER 244


>Z81567-3|CAB04587.1|  301|Caenorhabditis elegans Hypothetical
           protein K08C9.4 protein.
          Length = 301

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 17/51 (33%), Positives = 19/51 (37%)
 Frame = -2

Query: 819 PNXXTYQAGXYGERRHASPXGRKGGQVSXKSGRXGXXQXXXADGARGAPGE 667
           P      AG  GE     P G+ G +     G  G      A G  GAPGE
Sbjct: 177 PQGDAGAAGQDGEAGAPGPAGKNGQRGQGAPGPQGPEGPAGAAGQDGAPGE 227


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,467,949
Number of Sequences: 27780
Number of extensions: 244080
Number of successful extensions: 511
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 511
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)