Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_D13
         (903 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC107575-1|AAI07576.1|   72|Homo sapiens transmembrane protein 1...    53   2e-06
BC028585-1|AAH28585.1|   72|Homo sapiens transmembrane protein 1...    53   2e-06
BC026285-1|AAH26285.1|   72|Homo sapiens transmembrane protein 1...    53   2e-06

>BC107575-1|AAI07576.1|   72|Homo sapiens transmembrane protein 167
           protein.
          Length = 72

 Score = 52.8 bits (121), Expect = 2e-06
 Identities = 23/37 (62%), Positives = 26/37 (70%)
 Frame = +3

Query: 663 SAIFNFQXXXXXXXXXICTCAYLRSFFPSIMDRNKTG 773
           SAIFNFQ         ICTCAY+RS  PS++DRNKTG
Sbjct: 2   SAIFNFQSLLTVILLLICTCAYIRSLAPSLLDRNKTG 38


>BC028585-1|AAH28585.1|   72|Homo sapiens transmembrane protein 167
           protein.
          Length = 72

 Score = 52.8 bits (121), Expect = 2e-06
 Identities = 23/37 (62%), Positives = 26/37 (70%)
 Frame = +3

Query: 663 SAIFNFQXXXXXXXXXICTCAYLRSFFPSIMDRNKTG 773
           SAIFNFQ         ICTCAY+RS  PS++DRNKTG
Sbjct: 2   SAIFNFQSLLTVILLLICTCAYIRSLAPSLLDRNKTG 38


>BC026285-1|AAH26285.1|   72|Homo sapiens transmembrane protein 167
           protein.
          Length = 72

 Score = 52.8 bits (121), Expect = 2e-06
 Identities = 23/37 (62%), Positives = 26/37 (70%)
 Frame = +3

Query: 663 SAIFNFQXXXXXXXXXICTCAYLRSFFPSIMDRNKTG 773
           SAIFNFQ         ICTCAY+RS  PS++DRNKTG
Sbjct: 2   SAIFNFQSLLTVILLLICTCAYIRSLAPSLLDRNKTG 38


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,828,434
Number of Sequences: 237096
Number of extensions: 1836602
Number of successful extensions: 5920
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5918
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11659288620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)