Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_D12
(949 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1060 + 24007980-24008662,24010078-24010219,24010293-240115... 34 0.19
08_02_1057 + 23995782-23996446,23998026-23998167,23998242-239994... 33 0.44
04_04_1229 - 31906854-31907300,31907986-31908181,31908631-319087... 32 0.77
08_02_1114 - 24388807-24388932,24390941-24390970,24391044-243911... 31 1.3
03_05_0711 + 27051991-27052368,27053032-27053265,27055429-270556... 30 3.1
06_03_1478 - 30420097-30420651 29 4.1
02_05_0202 + 26708049-26709074 29 4.1
09_02_0366 + 7941550-7942161,7942230-7942775 29 5.4
06_03_0611 - 22721977-22722276,22722765-22722853,22722978-227230... 29 5.4
04_04_0734 + 27648661-27649596 29 5.4
04_01_0083 + 904473-905167,905247-905347,905902-905994,907322-90... 29 5.4
08_02_1172 + 24898290-24899141,24900864-24901328 29 7.1
01_06_1167 - 35062766-35062870,35063165-35063228,35063647-350637... 29 7.1
11_06_0047 + 19595904-19596185,19596284-19596424,19597195-195973... 28 9.4
09_04_0564 + 18565583-18566449,18569662-18570123 28 9.4
06_03_1230 + 28575661-28575728,28575791-28575861,28575978-285761... 28 9.4
05_04_0019 + 17197271-17197445,17197937-17198067,17198129-171981... 28 9.4
01_06_0873 + 32617428-32617532,32618166-32618234,32619195-326193... 28 9.4
>08_02_1060 +
24007980-24008662,24010078-24010219,24010293-24011537,
24012453-24013040
Length = 885
Score = 33.9 bits (74), Expect = 0.19
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
Frame = +1
Query: 448 GKQSEFECPVCSKIFKVYSWAWKHI---QKYH 534
GK +FECPVC+K F+ S + H+ KYH
Sbjct: 362 GKDGKFECPVCNKTFEEQSRYFGHVGSHAKYH 393
>08_02_1057 +
23995782-23996446,23998026-23998167,23998242-23999486,
23999521-23999529
Length = 686
Score = 32.7 bits (71), Expect = 0.44
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +1
Query: 448 GKQSEFECPVCSKIFKVYSWAWKHI 522
GK +FECPVC+K F+ S + HI
Sbjct: 356 GKDGKFECPVCNKTFEEQSRYFGHI 380
>04_04_1229 -
31906854-31907300,31907986-31908181,31908631-31908756,
31909962-31910329,31910680-31910835,31910968-31911168,
31911230-31911375,31911439-31911865,31912527-31912627,
31913197-31913254
Length = 741
Score = 31.9 bits (69), Expect = 0.77
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 694 LGCNQQFNTLHLYELHIXG 750
LGCN +LHLYE+HI G
Sbjct: 198 LGCNISLTSLHLYEVHISG 216
>08_02_1114 -
24388807-24388932,24390941-24390970,24391044-24391100,
24391231-24391393,24391487-24391614,24391697-24391802,
24391912-24391991,24392118-24392215,24392491-24392631,
24392738-24392822,24393556-24393693
Length = 383
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/63 (23%), Positives = 26/63 (41%)
Frame = +1
Query: 292 EVIAKRKLIPHKKVIKVAHKMNKTSENASTKKSQPHNLLRKYNTKTPIPSEDGKQSEFEC 471
+++ KR+ PH+ V+ + + ST K KT P +D + C
Sbjct: 256 QLLGKRRGFPHRTVLPPPVRDFQQYYGCSTVKETQSTSYGSLQKKTSAPKQDSDIGDQTC 315
Query: 472 PVC 480
P+C
Sbjct: 316 PIC 318
>03_05_0711 +
27051991-27052368,27053032-27053265,27055429-27055687,
27055956-27056149
Length = 354
Score = 29.9 bits (64), Expect = 3.1
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -3
Query: 416 YFLNKLCGCDFFVEAFSDVLFILWATFITFLWG 318
Y++N + G + + FSDVL + TFI L+G
Sbjct: 176 YYVNPMLGATYTPDQFSDVLMQPFTTFIEGLYG 208
>06_03_1478 - 30420097-30420651
Length = 184
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 190 CDTCALGFKNVQALRSHQAVAHPLKKRIAYRPKTEVIAK 306
CD C F+ QAL H+A +H KK ++ K +AK
Sbjct: 110 CDRCKAPFETRQALGGHRA-SHSTKKGCSWHAKQLAMAK 147
>02_05_0202 + 26708049-26709074
Length = 341
Score = 29.5 bits (63), Expect = 4.1
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 430 PIPSEDGKQSEFECPVCSKIFKVY 501
P+P K++ F+CP C K+F+ Y
Sbjct: 190 PVPE---KRTRFQCPACKKVFRSY 210
>09_02_0366 + 7941550-7942161,7942230-7942775
Length = 385
Score = 29.1 bits (62), Expect = 5.4
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Frame = +1
Query: 679 SQYSCLGCNQQFNTLHLYELHIXGLHSE---GAENL 777
+Q+SC CN+ FN + ++H+ G S+ G+E+L
Sbjct: 186 TQFSCAVCNKTFNRFNNMQMHMWGHGSQYRKGSESL 221
>06_03_0611 -
22721977-22722276,22722765-22722853,22722978-22723083,
22723178-22723306,22723803-22723887,22723994-22724103,
22724424-22724624,22725033-22725394,22725612-22725695,
22725791-22725916,22725999-22726161,22726378-22726536,
22727147-22727274,22727371-22727493,22727755-22727899,
22727992-22728068,22728318-22728696,22729325-22729411
Length = 950
Score = 29.1 bits (62), Expect = 5.4
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1
Query: 139 FYVQHSFQLGHKSVFFSLFK 80
+Y+ HS +GHKS F SL K
Sbjct: 558 YYLDHSASVGHKSSFLSLIK 577
>04_04_0734 + 27648661-27649596
Length = 311
Score = 29.1 bits (62), Expect = 5.4
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 430 PIPSEDGKQSEFECPVCSKIFKVY 501
P + K++ F+CP C K+F+ Y
Sbjct: 163 PAAAAAQKRTRFQCPACKKVFRSY 186
>04_01_0083 +
904473-905167,905247-905347,905902-905994,907322-907968
Length = 511
Score = 29.1 bits (62), Expect = 5.4
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +1
Query: 175 RLTCKCDTCALGFKNVQALRSHQAVAHPLK 264
R C C C F +L HQA+ H +K
Sbjct: 238 RELCACSQCGEVFNKADSLEHHQAIRHAVK 267
>08_02_1172 + 24898290-24899141,24900864-24901328
Length = 438
Score = 28.7 bits (61), Expect = 7.1
Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 5/67 (7%)
Frame = +1
Query: 388 SQPHNLLRKYNTKTPIPSEDG-KQSEFECPVCSKIFKVYS----WAWKHIQKYHCIDEKG 552
S P L K P PS+ ++F CPVC K F Y+ W H +Y E
Sbjct: 242 STPIGKLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRKGPESL 301
Query: 553 NPVLPTS 573
V PT+
Sbjct: 302 RGVQPTA 308
>01_06_1167 -
35062766-35062870,35063165-35063228,35063647-35063738,
35064137-35064205,35064322-35064412,35064509-35064732,
35065064-35065180,35065583-35065651,35066172-35066237,
35066335-35066505,35066581-35066661,35067620-35067700
Length = 409
Score = 28.7 bits (61), Expect = 7.1
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 325 KKVIKVAHKMNKTSENASTKKSQPHNLLRKYNTKTPIPSEDGKQS 459
KKV+ + K+ N +KK+ P N + N P P+++ K S
Sbjct: 171 KKVVSGQKNVGKSDANVDSKKAAPENKAPE-NKANPTPAKNNKPS 214
>11_06_0047 +
19595904-19596185,19596284-19596424,19597195-19597307,
19597970-19598049,19598557-19598720,19598931-19599060,
19599155-19599254,19599452-19599500,19599775-19599849,
19600026-19600124,19600745-19600823,19600897-19601045,
19601334-19601393,19601490-19601684
Length = 571
Score = 28.3 bits (60), Expect = 9.4
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 565 PTSKDIIKPVRIERCIACNVLIKSDDHTC 651
PT K II+P+R + C C ++ DH C
Sbjct: 375 PTCK-IIRPMRSKHCPTCKHCVEQFDHHC 402
>09_04_0564 + 18565583-18566449,18569662-18570123
Length = 442
Score = 28.3 bits (60), Expect = 9.4
Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 5/67 (7%)
Frame = +1
Query: 388 SQPHNLLRKYNTKTPIPSEDG-KQSEFECPVCSKIFKVYS----WAWKHIQKYHCIDEKG 552
S P L K P PS+ ++F CPVC K F Y+ W H +Y E
Sbjct: 247 STPIGRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRKGPESL 306
Query: 553 NPVLPTS 573
+ PT+
Sbjct: 307 RGIQPTA 313
>06_03_1230 +
28575661-28575728,28575791-28575861,28575978-28576188,
28576339-28576495
Length = 168
Score = 28.3 bits (60), Expect = 9.4
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
Frame = +1
Query: 208 GFKNVQALRSHQAVAH----PLKKRIAYRPKTEVIAKRKLIPHKKVIKVAHKMNKTSENA 375
GF L+ H VA PL +Y+ V + K + +K MNKT EN
Sbjct: 91 GFSYEDRLKPHIPVATDRVLPLSLASSYKGMRLVTLQSKEKAAR--LKSLRAMNKTVENM 148
Query: 376 STKKSQPHNLLRKYNTKTP 432
TK +N++RK P
Sbjct: 149 RTKIGMKNNVIRKLPKNCP 167
>05_04_0019 +
17197271-17197445,17197937-17198067,17198129-17198164,
17198196-17198333,17198503-17198601,17198750-17199124
Length = 317
Score = 28.3 bits (60), Expect = 9.4
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +1
Query: 190 CDTCALGFKNVQALRSHQAVAHPLKKRIAYRPKTEVIAKRKLIPHKKVIKVAHK 351
C ALG + + S + HPL + + + E+I K K++P K VI A K
Sbjct: 101 CKGLALGSNLMAYMISEKVKPHPLVVTLLTQVE-EIIPKWKIVPTKDVIDSAFK 153
>01_06_0873 +
32617428-32617532,32618166-32618234,32619195-32619380,
32619687-32619776,32620389-32620462,32621149-32621260,
32621413-32621468,32621826-32621880,32621965-32622021,
32622696-32622797,32623467-32623547,32623756-32623808,
32625245-32625314,32626540-32626603,32627339-32627487,
32627564-32627719,32628011-32628108,32628763-32628847,
32628932-32628997,32629066-32629125,32629408-32629494,
32630307-32630360,32630538-32630576,32630651-32630779,
32630859-32630911,32630984-32631032,32632240-32632298,
32633111-32633259,32633338-32633492,32633719-32633847,
32633932-32634017,32634220-32634335,32634429-32634541,
32635335-32635458,32635540-32635658,32636289-32636490,
32636586-32636757,32637852-32638176,32638442-32638529,
32638970-32639059,32639169-32639370,32639681-32639705
Length = 1450
Score = 28.3 bits (60), Expect = 9.4
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Frame = +1
Query: 154 PGKLRSQRLTCKCDTCALGFKNVQALRSHQAVAHPLKKRI--AYRPKTEVIA--KRKL-I 318
PG + + L + D+ L KNVQALR+ VAH L + ++ E +A R +
Sbjct: 531 PGSKKVEMLVDQRDSIILTPKNVQALRTLFNVAHRLHNVLGPSWVLVLETLAALDRAIHS 590
Query: 319 PHKKVIKVAHKMNKTSENASTKKSQPHNL 405
PH +V+ +++ S + S + S H L
Sbjct: 591 PHASTQEVSASVSRLSRDTSGQYSDFHIL 619
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,208,304
Number of Sequences: 37544
Number of extensions: 481176
Number of successful extensions: 1254
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1253
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2729534420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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