Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_D09
         (893 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003231-1|AAO24986.1|  614|Drosophila melanogaster LP08529p pro...    42   9e-04
AE014297-200|AAF52055.2|  614|Drosophila melanogaster CG12163-PA...    42   9e-04
AE014297-199|AAN13266.1|  475|Drosophila melanogaster CG12163-PB...    42   9e-04
AE013599-2873|AAF57567.1|   79|Drosophila melanogaster CG10460-P...    39   0.008
AY075271-1|AAL68138.2|  480|Drosophila melanogaster AT29464p pro...    31   2.8  

>BT003231-1|AAO24986.1|  614|Drosophila melanogaster LP08529p
           protein.
          Length = 614

 Score = 42.3 bits (95), Expect = 9e-04
 Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
 Frame = +3

Query: 189 ETDTPRHYDLNQAKELFEIFVKEHNREYKDDADRELHYQSFKKHLAEINQLNEKNPYTT- 365
           +T     +  ++   LF  F     R Y   A+R++  + F+++L  I +LN     +  
Sbjct: 292 KTHKKHSHRFDKVDHLFYKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNANEMGSAK 351

Query: 366 FGINKFADYTPEEQQSRLGL 425
           +GI +FAD T  E + R GL
Sbjct: 352 YGITEFADMTSSEYKERTGL 371


>AE014297-200|AAF52055.2|  614|Drosophila melanogaster CG12163-PA,
           isoform A protein.
          Length = 614

 Score = 42.3 bits (95), Expect = 9e-04
 Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
 Frame = +3

Query: 189 ETDTPRHYDLNQAKELFEIFVKEHNREYKDDADRELHYQSFKKHLAEINQLNEKNPYTT- 365
           +T     +  ++   LF  F     R Y   A+R++  + F+++L  I +LN     +  
Sbjct: 292 KTHKKHSHRFDKVDHLFYKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNANEMGSAK 351

Query: 366 FGINKFADYTPEEQQSRLGL 425
           +GI +FAD T  E + R GL
Sbjct: 352 YGITEFADMTSSEYKERTGL 371


>AE014297-199|AAN13266.1|  475|Drosophila melanogaster CG12163-PB,
           isoform B protein.
          Length = 475

 Score = 42.3 bits (95), Expect = 9e-04
 Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
 Frame = +3

Query: 189 ETDTPRHYDLNQAKELFEIFVKEHNREYKDDADRELHYQSFKKHLAEINQLNEKNPYTT- 365
           +T     +  ++   LF  F     R Y   A+R++  + F+++L  I +LN     +  
Sbjct: 153 KTHKKHSHRFDKVDHLFYKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNANEMGSAK 212

Query: 366 FGINKFADYTPEEQQSRLGL 425
           +GI +FAD T  E + R GL
Sbjct: 213 YGITEFADMTSSEYKERTGL 232


>AE013599-2873|AAF57567.1|   79|Drosophila melanogaster CG10460-PA
           protein.
          Length = 79

 Score = 39.1 bits (87), Expect = 0.008
 Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = +3

Query: 255 EHNREYKDDADRELHYQSFKKHLAEINQLNEKNPYT-TFGINKFADYTPEEQQSRLGLRL 431
           + N E ++D  R   Y   K  + E N+  EK   T   GIN  AD TPEE   R G ++
Sbjct: 17  DKNYEAEEDLMRRRIYAESKARIEEHNRKFEKGEVTWKMGINHLADLTPEEFAQRCGKKV 76

Query: 432 P 434
           P
Sbjct: 77  P 77


>AY075271-1|AAL68138.2|  480|Drosophila melanogaster AT29464p
           protein.
          Length = 480

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/46 (30%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
 Frame = +3

Query: 225 AKELFEIFVKEHNREYKDDADRELHY--QSFKKHLAEINQLNEKNP 356
           A  LFE+ V+EH   ++ D D+ LH+  + +++ L  + +++E  P
Sbjct: 174 ADNLFEVSVREHIEYHECDGDKLLHWGTKGYRRFLRLLMKVSEDTP 219


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,957,983
Number of Sequences: 53049
Number of extensions: 466006
Number of successful extensions: 1283
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1280
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4341591036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)