Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_D08
         (943 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    26   1.9  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   7.7  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    24   7.7  
AF203337-1|AAF19832.1|  184|Anopheles gambiae immune-responsive ...    24   7.7  

>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 25.8 bits (54), Expect = 1.9
 Identities = 16/57 (28%), Positives = 18/57 (31%)
 Frame = +1

Query: 598 PXNPGXPPEKTFXPKGPQXAXNPXKGXFGXXFPXGPPPLXXPSKNSXPPFXGWPXPP 768
           P   G P      P  P     P +       P  PP L  P+    PP  G   PP
Sbjct: 66  PFTAGPPKPNISIP--PPTMNMPPRPGMIPGMPGAPPLLMGPNGPLPPPMMGMRPPP 120


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.8 bits (49), Expect = 7.7
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = +3

Query: 537 APGXXVGXPXXPPPKGGXXFSXKSG 611
           APG   G P  P PKG   +    G
Sbjct: 402 APGGGEGRPGAPGPKGPRGYEGPQG 426


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.8 bits (49), Expect = 7.7
 Identities = 18/55 (32%), Positives = 19/55 (34%), Gaps = 3/55 (5%)
 Frame = -2

Query: 621 RGXPRIXGKTVFP-PLGXGXXVP--PPXXXGPGXXGGGNGXGXQKXXPXXXGXGG 466
           RG P + G    P   G     P  PP   GP    G NG    K  P   G  G
Sbjct: 686 RGLPGMSGLNGAPGEKGQKGETPQLPPQRKGPPGPPGFNGPKGDKGLPGLAGPAG 740


>AF203337-1|AAF19832.1|  184|Anopheles gambiae immune-responsive
           serine protease-relatedprotein ISPR9 protein.
          Length = 184

 Score = 23.8 bits (49), Expect = 7.7
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -3

Query: 770 PGGXGHPXNGGXEFFXGXXRGGGPXG 693
           PGG  HP  GG     G  +GGG  G
Sbjct: 7   PGGAKHPGTGG-----GYNQGGGVKG 27


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 585,578
Number of Sequences: 2352
Number of extensions: 10028
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 102949299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)