Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_D07
(732 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0048 - 12852335-12852745 31 0.71
06_01_0428 + 3055163-3055573 31 0.71
06_01_0427 - 3054204-3054614 31 0.71
06_01_0425 - 3045557-3046004,3046852-3046856 31 0.71
06_01_0423 - 3039527-3039937 31 0.71
06_01_0217 - 1644696-1645034,1645143-1645214 31 0.71
05_04_0449 - 21355439-21355849 31 0.71
04_04_0062 + 22437653-22437724,22437866-22437943,22438222-22438392 31 0.71
04_03_0909 + 20748653-20749063 31 0.71
03_03_0212 + 15479850-15479921,15479965-15480083,15480175-154802... 31 0.71
01_06_1456 + 37507156-37507566 31 0.71
11_01_0348 - 2607315-2607424,2608634-2609030 31 1.2
02_03_0108 - 15324922-15325092,15325189-15325279,15325511-15325596 30 1.6
02_03_0107 - 15303890-15304060,15304158-15304248,15304505-153046... 30 1.6
05_05_0297 - 23921648-23921758,23922011-23922089,23922774-239228... 28 8.8
>12_02_0048 - 12852335-12852745
Length = 136
Score = 31.5 bits (68), Expect = 0.71
Identities = 19/44 (43%), Positives = 25/44 (56%)
Frame = +2
Query: 92 RQLARHXL*GCLKTTNLCAIHAKKGHPIIAKRNIQXGRRKVXGE 223
++ A L G K TNLC IHAK+ I ++IQ RR + GE
Sbjct: 94 QEAAETYLVGLFKDTNLCVIHAKR--VTIMPKDIQLARR-IRGE 134
>06_01_0428 + 3055163-3055573
Length = 136
Score = 31.5 bits (68), Expect = 0.71
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +2
Query: 92 RQLARHXL*GCLKTTNLCAIHAKKGHPIIAKRNIQXGRRKVXGE 223
++ A L G + TNLCAIHAK+ I ++IQ RR + GE
Sbjct: 94 QEAAEAYLVGLFEDTNLCAIHAKR--VTIMPKDIQLARR-IRGE 134
>06_01_0427 - 3054204-3054614
Length = 136
Score = 31.5 bits (68), Expect = 0.71
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +2
Query: 92 RQLARHXL*GCLKTTNLCAIHAKKGHPIIAKRNIQXGRRKVXGE 223
++ A L G + TNLCAIHAK+ I ++IQ RR + GE
Sbjct: 94 QEAAEAYLVGLFEDTNLCAIHAKR--VTIMPKDIQLARR-IRGE 134
>06_01_0425 - 3045557-3046004,3046852-3046856
Length = 150
Score = 31.5 bits (68), Expect = 0.71
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +2
Query: 92 RQLARHXL*GCLKTTNLCAIHAKKGHPIIAKRNIQXGRRKVXGE 223
++ A L G + TNLCAIHAK+ I ++IQ RR + GE
Sbjct: 108 QEAAEAYLVGLFEDTNLCAIHAKR--VTIMPKDIQLARR-IRGE 148
>06_01_0423 - 3039527-3039937
Length = 136
Score = 31.5 bits (68), Expect = 0.71
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +2
Query: 92 RQLARHXL*GCLKTTNLCAIHAKKGHPIIAKRNIQXGRRKVXGE 223
++ A L G + TNLCAIHAK+ I ++IQ RR + GE
Sbjct: 94 QEAAEAYLVGLFEDTNLCAIHAKR--VTIMPKDIQLARR-IRGE 134
>06_01_0217 - 1644696-1645034,1645143-1645214
Length = 136
Score = 31.5 bits (68), Expect = 0.71
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +2
Query: 92 RQLARHXL*GCLKTTNLCAIHAKKGHPIIAKRNIQXGRRKVXGE 223
++ A L G + TNLCAIHAK+ I ++IQ RR + GE
Sbjct: 94 QEAAEAYLVGLFEDTNLCAIHAKR--VTIMPKDIQLARR-IRGE 134
>05_04_0449 - 21355439-21355849
Length = 136
Score = 31.5 bits (68), Expect = 0.71
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +2
Query: 92 RQLARHXL*GCLKTTNLCAIHAKKGHPIIAKRNIQXGRRKVXGE 223
++ A L G + TNLCAIHAK+ I ++IQ RR + GE
Sbjct: 94 QEAAEAYLVGLFEDTNLCAIHAKR--VTIMPKDIQLARR-IRGE 134
>04_04_0062 + 22437653-22437724,22437866-22437943,22438222-22438392
Length = 106
Score = 31.5 bits (68), Expect = 0.71
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +2
Query: 92 RQLARHXL*GCLKTTNLCAIHAKKGHPIIAKRNIQXGRRKVXGE 223
++ A L G + TNLCAIHAK+ I ++IQ RR + GE
Sbjct: 64 QEAAEAYLVGLFEDTNLCAIHAKR--VTIMPKDIQLARR-IRGE 104
>04_03_0909 + 20748653-20749063
Length = 136
Score = 31.5 bits (68), Expect = 0.71
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +2
Query: 92 RQLARHXL*GCLKTTNLCAIHAKKGHPIIAKRNIQXGRRKVXGE 223
++ A L G + TNLCAIHAK+ I ++IQ RR + GE
Sbjct: 94 QEAAEAYLVGLFEDTNLCAIHAKR--VTIMPKDIQLARR-IRGE 134
>03_03_0212 +
15479850-15479921,15479965-15480083,15480175-15480265,
15480363-15480533
Length = 150
Score = 31.5 bits (68), Expect = 0.71
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +2
Query: 92 RQLARHXL*GCLKTTNLCAIHAKKGHPIIAKRNIQXGRRKVXGE 223
++ A L G + TNLCAIHAK+ I ++IQ RR + GE
Sbjct: 108 QEAAEAYLVGLFEDTNLCAIHAKR--VTIMPKDIQLARR-IRGE 148
>01_06_1456 + 37507156-37507566
Length = 136
Score = 31.5 bits (68), Expect = 0.71
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +2
Query: 92 RQLARHXL*GCLKTTNLCAIHAKKGHPIIAKRNIQXGRRKVXGE 223
++ A L G + TNLCAIHAK+ I ++IQ RR + GE
Sbjct: 94 QEAAEAYLVGLFEDTNLCAIHAKR--VTIMPKDIQLARR-IRGE 134
>11_01_0348 - 2607315-2607424,2608634-2609030
Length = 168
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +2
Query: 92 RQLARHXL*GCLKTTNLCAIHAKKGHPIIAKRNIQXGRR 208
++ A L G + TNLCAIHAK+ I ++IQ RR
Sbjct: 94 QEAAEAYLVGLFEDTNLCAIHAKR--VTIMPKDIQLARR 130
>02_03_0108 - 15324922-15325092,15325189-15325279,15325511-15325596
Length = 115
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +2
Query: 92 RQLARHXL*GCLKTTNLCAIHAKKGHPIIAKRNIQXGRRKVXGE 223
++ A L G + TNLCAIH+K+ I +++Q RR + GE
Sbjct: 73 QEAAEAYLVGLFEDTNLCAIHSKR--VTIMSKDVQLARR-IRGE 113
>02_03_0107 -
15303890-15304060,15304158-15304248,15304505-15304614,
15304715-15304784,15306365-15306558
Length = 211
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +2
Query: 92 RQLARHXL*GCLKTTNLCAIHAKKGHPIIAKRNIQXGRRKVXGE 223
++ A L G + TNLCAIH+K+ I +++Q RR + GE
Sbjct: 169 QEAAEAYLVGLFEDTNLCAIHSKR--VTIMSKDVQLARR-IRGE 209
>05_05_0297 -
23921648-23921758,23922011-23922089,23922774-23922822,
23923180-23923255,23923693-23923767,23923862-23923992,
23924830-23924935
Length = 208
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +2
Query: 92 RQLARHXL*GCLKTTNLCAIHAKKGHPIIAKRNIQXGRR 208
++ A + L + +NLCAIHAK+ I ++++Q RR
Sbjct: 103 QEAAEYHLVDIFEVSNLCAIHAKR--VTIMQKDMQLARR 139
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,955,513
Number of Sequences: 37544
Number of extensions: 181316
Number of successful extensions: 663
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 626
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1921741964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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