Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_D07
         (732 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93388-9|CAB07653.1|  136|Caenorhabditis elegans Hypothetical pr...    31   0.64 
Z83245-7|CAB05834.1|  136|Caenorhabditis elegans Hypothetical pr...    31   0.64 
Z83245-3|CAB05833.1|  136|Caenorhabditis elegans Hypothetical pr...    31   0.64 
Z83245-2|CAB05831.1|  136|Caenorhabditis elegans Hypothetical pr...    31   0.64 
Z82271-1|CAB05209.1|  136|Caenorhabditis elegans Hypothetical pr...    31   0.64 
Z81495-3|CAB04057.1|  136|Caenorhabditis elegans Hypothetical pr...    31   0.64 
Z73102-11|CAA97411.1|  136|Caenorhabditis elegans Hypothetical p...    31   0.64 
Z68336-2|CAA92733.1|  136|Caenorhabditis elegans Hypothetical pr...    31   0.64 
X15634-2|CAA33644.1|  136|Caenorhabditis elegans Histone protein...    31   0.64 
U64845-9|AAC48033.1|  136|Caenorhabditis elegans Histone protein...    31   0.64 
U64843-9|AAF98226.1|  136|Caenorhabditis elegans Histone protein...    31   0.64 
U64843-4|AAF98231.1|  136|Caenorhabditis elegans Histone protein...    31   0.64 
U58750-10|AAB00650.1|  136|Caenorhabditis elegans Histone protei...    31   0.64 
AF304122-1|AAG50235.1|  136|Caenorhabditis elegans histone H3 pr...    31   0.64 
AF047656-3|AAC05102.1|  136|Caenorhabditis elegans Histone prote...    31   0.64 
AC024696-4|AAK84514.1|  136|Caenorhabditis elegans Histone prote...    31   0.64 
Z38112-1|CAA86228.1|  127|Caenorhabditis elegans Hypothetical pr...    31   1.1  
U28732-2|AAB04902.1|  136|Caenorhabditis elegans Histone protein...    30   1.5  
Z98866-6|CAB11546.1|  136|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z74476-1|CAA98963.1|  136|Caenorhabditis elegans Hypothetical pr...    29   3.4  

>Z93388-9|CAB07653.1|  136|Caenorhabditis elegans Hypothetical
           protein T10C6.13 protein.
          Length = 136

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 19/44 (43%), Positives = 26/44 (59%)
 Frame = +2

Query: 92  RQLARHXL*GCLKTTNLCAIHAKKGHPIIAKRNIQXGRRKVXGE 223
           ++ A   L G  + TNLCAIHAK+    I  ++IQ  RR + GE
Sbjct: 94  QEAAEAYLVGLFEDTNLCAIHAKR--VTIMPKDIQLARR-IRGE 134


>Z83245-7|CAB05834.1|  136|Caenorhabditis elegans Hypothetical
           protein ZK131.7 protein.
          Length = 136

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 19/44 (43%), Positives = 26/44 (59%)
 Frame = +2

Query: 92  RQLARHXL*GCLKTTNLCAIHAKKGHPIIAKRNIQXGRRKVXGE 223
           ++ A   L G  + TNLCAIHAK+    I  ++IQ  RR + GE
Sbjct: 94  QEAAEAYLVGLFEDTNLCAIHAKR--VTIMPKDIQLARR-IRGE 134


>Z83245-3|CAB05833.1|  136|Caenorhabditis elegans Hypothetical
           protein ZK131.3 protein.
          Length = 136

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 19/44 (43%), Positives = 26/44 (59%)
 Frame = +2

Query: 92  RQLARHXL*GCLKTTNLCAIHAKKGHPIIAKRNIQXGRRKVXGE 223
           ++ A   L G  + TNLCAIHAK+    I  ++IQ  RR + GE
Sbjct: 94  QEAAEAYLVGLFEDTNLCAIHAKR--VTIMPKDIQLARR-IRGE 134


>Z83245-2|CAB05831.1|  136|Caenorhabditis elegans Hypothetical
           protein ZK131.2 protein.
          Length = 136

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 19/44 (43%), Positives = 26/44 (59%)
 Frame = +2

Query: 92  RQLARHXL*GCLKTTNLCAIHAKKGHPIIAKRNIQXGRRKVXGE 223
           ++ A   L G  + TNLCAIHAK+    I  ++IQ  RR + GE
Sbjct: 94  QEAAEAYLVGLFEDTNLCAIHAKR--VTIMPKDIQLARR-IRGE 134


>Z82271-1|CAB05209.1|  136|Caenorhabditis elegans Hypothetical
           protein F54E12.1 protein.
          Length = 136

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 19/44 (43%), Positives = 26/44 (59%)
 Frame = +2

Query: 92  RQLARHXL*GCLKTTNLCAIHAKKGHPIIAKRNIQXGRRKVXGE 223
           ++ A   L G  + TNLCAIHAK+    I  ++IQ  RR + GE
Sbjct: 94  QEAAEAYLVGLFEDTNLCAIHAKR--VTIMPKDIQLARR-IRGE 134


>Z81495-3|CAB04057.1|  136|Caenorhabditis elegans Hypothetical
           protein F08G2.3 protein.
          Length = 136

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 19/44 (43%), Positives = 26/44 (59%)
 Frame = +2

Query: 92  RQLARHXL*GCLKTTNLCAIHAKKGHPIIAKRNIQXGRRKVXGE 223
           ++ A   L G  + TNLCAIHAK+    I  ++IQ  RR + GE
Sbjct: 94  QEAAEAYLVGLFEDTNLCAIHAKR--VTIMPKDIQLARR-IRGE 134


>Z73102-11|CAA97411.1|  136|Caenorhabditis elegans Hypothetical
           protein B0035.10 protein.
          Length = 136

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 19/44 (43%), Positives = 26/44 (59%)
 Frame = +2

Query: 92  RQLARHXL*GCLKTTNLCAIHAKKGHPIIAKRNIQXGRRKVXGE 223
           ++ A   L G  + TNLCAIHAK+    I  ++IQ  RR + GE
Sbjct: 94  QEAAEAYLVGLFEDTNLCAIHAKR--VTIMPKDIQLARR-IRGE 134


>Z68336-2|CAA92733.1|  136|Caenorhabditis elegans Hypothetical
           protein F22B3.2 protein.
          Length = 136

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 19/44 (43%), Positives = 26/44 (59%)
 Frame = +2

Query: 92  RQLARHXL*GCLKTTNLCAIHAKKGHPIIAKRNIQXGRRKVXGE 223
           ++ A   L G  + TNLCAIHAK+    I  ++IQ  RR + GE
Sbjct: 94  QEAAEAYLVGLFEDTNLCAIHAKR--VTIMPKDIQLARR-IRGE 134


>X15634-2|CAA33644.1|  136|Caenorhabditis elegans Histone protein
           protein.
          Length = 136

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 19/44 (43%), Positives = 26/44 (59%)
 Frame = +2

Query: 92  RQLARHXL*GCLKTTNLCAIHAKKGHPIIAKRNIQXGRRKVXGE 223
           ++ A   L G  + TNLCAIHAK+    I  ++IQ  RR + GE
Sbjct: 94  QEAAEAYLVGLFEDTNLCAIHAKR--VTIMPKDIQLARR-IRGE 134


>U64845-9|AAC48033.1|  136|Caenorhabditis elegans Histone protein 6
           protein.
          Length = 136

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 19/44 (43%), Positives = 26/44 (59%)
 Frame = +2

Query: 92  RQLARHXL*GCLKTTNLCAIHAKKGHPIIAKRNIQXGRRKVXGE 223
           ++ A   L G  + TNLCAIHAK+    I  ++IQ  RR + GE
Sbjct: 94  QEAAEAYLVGLFEDTNLCAIHAKR--VTIMPKDIQLARR-IRGE 134


>U64843-9|AAF98226.1|  136|Caenorhabditis elegans Histone protein 17
           protein.
          Length = 136

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 19/44 (43%), Positives = 26/44 (59%)
 Frame = +2

Query: 92  RQLARHXL*GCLKTTNLCAIHAKKGHPIIAKRNIQXGRRKVXGE 223
           ++ A   L G  + TNLCAIHAK+    I  ++IQ  RR + GE
Sbjct: 94  QEAAEAYLVGLFEDTNLCAIHAKR--VTIMPKDIQLARR-IRGE 134


>U64843-4|AAF98231.1|  136|Caenorhabditis elegans Histone protein 27
           protein.
          Length = 136

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 19/44 (43%), Positives = 26/44 (59%)
 Frame = +2

Query: 92  RQLARHXL*GCLKTTNLCAIHAKKGHPIIAKRNIQXGRRKVXGE 223
           ++ A   L G  + TNLCAIHAK+    I  ++IQ  RR + GE
Sbjct: 94  QEAAEAYLVGLFEDTNLCAIHAKR--VTIMPKDIQLARR-IRGE 134


>U58750-10|AAB00650.1|  136|Caenorhabditis elegans Histone protein
           59 protein.
          Length = 136

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 19/44 (43%), Positives = 26/44 (59%)
 Frame = +2

Query: 92  RQLARHXL*GCLKTTNLCAIHAKKGHPIIAKRNIQXGRRKVXGE 223
           ++ A   L G  + TNLCAIHAK+    I  ++IQ  RR + GE
Sbjct: 94  QEAAEAYLVGLFEDTNLCAIHAKR--VTIMPKDIQLARR-IRGE 134


>AF304122-1|AAG50235.1|  136|Caenorhabditis elegans histone H3
           protein.
          Length = 136

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 19/44 (43%), Positives = 26/44 (59%)
 Frame = +2

Query: 92  RQLARHXL*GCLKTTNLCAIHAKKGHPIIAKRNIQXGRRKVXGE 223
           ++ A   L G  + TNLCAIHAK+    I  ++IQ  RR + GE
Sbjct: 94  QEAAEAYLVGLFEDTNLCAIHAKR--VTIMPKDIQLARR-IRGE 134


>AF047656-3|AAC05102.1|  136|Caenorhabditis elegans Histone protein
           32 protein.
          Length = 136

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 19/44 (43%), Positives = 26/44 (59%)
 Frame = +2

Query: 92  RQLARHXL*GCLKTTNLCAIHAKKGHPIIAKRNIQXGRRKVXGE 223
           ++ A   L G  + TNLCAIHAK+    I  ++IQ  RR + GE
Sbjct: 94  QEAAEAYLVGLFEDTNLCAIHAKR--VTIMPKDIQLARR-IRGE 134


>AC024696-4|AAK84514.1|  136|Caenorhabditis elegans Histone protein
           49 protein.
          Length = 136

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 19/44 (43%), Positives = 26/44 (59%)
 Frame = +2

Query: 92  RQLARHXL*GCLKTTNLCAIHAKKGHPIIAKRNIQXGRRKVXGE 223
           ++ A   L G  + TNLCAIHAK+    I  ++IQ  RR + GE
Sbjct: 94  QEAAEAYLVGLFEDTNLCAIHAKR--VTIMPKDIQLARR-IRGE 134


>Z38112-1|CAA86228.1|  127|Caenorhabditis elegans Hypothetical
           protein E03A3.3 protein.
          Length = 127

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 17/44 (38%), Positives = 27/44 (61%)
 Frame = +2

Query: 92  RQLARHXL*GCLKTTNLCAIHAKKGHPIIAKRNIQXGRRKVXGE 223
           ++ + + L G  + TNLCAIHAK+    I  +++Q  RR + GE
Sbjct: 85  QEASEYFLVGLFEDTNLCAIHAKR--VTIMPKDMQLARR-IRGE 125


>U28732-2|AAB04902.1|  136|Caenorhabditis elegans Histone protein 71
           protein.
          Length = 136

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 17/35 (48%), Positives = 22/35 (62%)
 Frame = +2

Query: 119 GCLKTTNLCAIHAKKGHPIIAKRNIQXGRRKVXGE 223
           G  + TNLCAIHAK+    I  ++IQ  RR + GE
Sbjct: 103 GLFEDTNLCAIHAKR--VTIMPKDIQLARR-IRGE 134


>Z98866-6|CAB11546.1|  136|Caenorhabditis elegans Hypothetical
           protein Y49E10.6 protein.
          Length = 136

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = +2

Query: 119 GCLKTTNLCAIHAKKGHPIIAKRNIQXGRRKVXGE 223
           G  + TNLCAIHAK+    I  +++Q  RR + GE
Sbjct: 103 GLFEDTNLCAIHAKR--VTIMPKDMQLARR-IRGE 134


>Z74476-1|CAA98963.1|  136|Caenorhabditis elegans Hypothetical
           protein W05B10.1 protein.
          Length = 136

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = +2

Query: 119 GCLKTTNLCAIHAKKGHPIIAKRNIQXGRRKVXGE 223
           G  + TNLCAIHAK+    I  +++Q  RR + GE
Sbjct: 103 GLFEDTNLCAIHAKR--VTIMPKDMQLARR-IRGE 134


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,169,805
Number of Sequences: 27780
Number of extensions: 128787
Number of successful extensions: 312
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 301
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)