Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_D06
(962 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 36 0.057
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 35 0.075
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 35 0.099
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 35 0.099
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.13
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.13
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.13
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 33 0.23
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 33 0.23
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 33 0.40
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 33 0.40
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 33 0.40
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 31 0.92
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 31 1.6
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.6
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.6
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.6
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 2.1
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 4.9
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 6.5
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 6.5
U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical pr... 29 6.5
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 6.5
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 28 8.6
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 28 8.6
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 28 8.6
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 28 8.6
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 35.5 bits (78), Expect = 0.057
Identities = 18/52 (34%), Positives = 20/52 (38%)
Frame = +2
Query: 791 PPXKXKKXGXXPKKPPXPPPXFXXXGXXKKKPPXXPPXXXGGSXPPPRXXXP 946
PP K G P P P G ++PP PP GS PPP P
Sbjct: 96 PPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPP--PPPKGTGSPPPPPTGEP 145
Score = 35.5 bits (78), Expect = 0.057
Identities = 18/52 (34%), Positives = 20/52 (38%)
Frame = +2
Query: 791 PPXKXKKXGXXPKKPPXPPPXFXXXGXXKKKPPXXPPXXXGGSXPPPRXXXP 946
PP K G P P P G ++PP PP GS PPP P
Sbjct: 127 PPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPP--PPPKGTGSPPPPPTGEP 176
Score = 34.3 bits (75), Expect = 0.13
Identities = 17/52 (32%), Positives = 20/52 (38%)
Frame = +2
Query: 791 PPXKXKKXGXXPKKPPXPPPXFXXXGXXKKKPPXXPPXXXGGSXPPPRXXXP 946
PP K G P P P G ++PP PP G+ PPP P
Sbjct: 33 PPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPP--PPPKGTGTPPPPPTGEP 82
Score = 34.3 bits (75), Expect = 0.13
Identities = 17/52 (32%), Positives = 20/52 (38%)
Frame = +2
Query: 791 PPXKXKKXGXXPKKPPXPPPXFXXXGXXKKKPPXXPPXXXGGSXPPPRXXXP 946
PP K G P P P G ++PP PP G+ PPP P
Sbjct: 158 PPPPPKGTGSPPPPPTGEPQDLSTEGNASRRPP--PPPKGTGTPPPPPTGEP 207
Score = 33.9 bits (74), Expect = 0.17
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = +2
Query: 791 PPXKXKKXGXXPKKPPXPPPXFXXXGXXKKKPPXXPPXXXGGSXPPP 931
PP K G P P P G ++PP PP G PPP
Sbjct: 189 PPPPPKGTGTPPPPPTGEPQDLSAEGYASRRPP-PPPKGTGSPTPPP 234
Score = 33.5 bits (73), Expect = 0.23
Identities = 16/47 (34%), Positives = 19/47 (40%)
Frame = +2
Query: 791 PPXKXKKXGXXPKKPPXPPPXFXXXGXXKKKPPXXPPXXXGGSXPPP 931
PP K G P P P G ++PP PP G+ PPP
Sbjct: 251 PPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPP--PPPKGTGTPPPP 295
Score = 32.3 bits (70), Expect = 0.53
Identities = 17/52 (32%), Positives = 19/52 (36%)
Frame = +2
Query: 791 PPXKXKKXGXXPKKPPXPPPXFXXXGXXKKKPPXXPPXXXGGSXPPPRXXXP 946
PP K G P P G ++PP PP GS PPP P
Sbjct: 220 PPPPPKGTGSPTPPPTGEPQDLSGEGNASRRPP--PPPKGTGSPPPPPTGEP 269
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/47 (29%), Positives = 15/47 (31%)
Frame = +2
Query: 791 PPXKXKKXGXXPKKPPXPPPXFXXXGXXKKKPPXXPPXXXGGSXPPP 931
PP K G P P P + P PP G PPP
Sbjct: 64 PPPPPKGTGTPPPPPTGEPQDLSAEEGNASRRPPPPPKGTGTPPPPP 110
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 35.1 bits (77), Expect = 0.075
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = +2
Query: 833 PPXPPPXFXXXGXXKKKPPXXPPXXXGGSXPPPRXXXPXGG 955
PP PPP PP PP GG PPP P GG
Sbjct: 561 PPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPP---PPPGG 598
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = +3
Query: 816 GSXXKNPPXPPPXFXXXXXKKKNLPXXPRXXGGAXPPPPGXXXPGG 953
G+ PP PPP P P G PPPP PGG
Sbjct: 555 GTNVPIPPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPP--PPPGG 598
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 34.7 bits (76), Expect = 0.099
Identities = 20/57 (35%), Positives = 21/57 (36%), Gaps = 2/57 (3%)
Frame = +2
Query: 791 PPXKXKKXGXXPKKPPXPPP-XFXXXGXXKKKPPXXP-PXXXGGSXPPPRXXXPXGG 955
PP + P PP PPP F G PP P GG PPP P G
Sbjct: 303 PPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAG 359
Score = 31.9 bits (69), Expect = 0.70
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = +2
Query: 791 PPXKXKKXGXXPKKPPXPPPXFXXXGXXKKKPPXXPPXXXGGSXPPPRXXXP 946
PP + G PP PPP G PP P G PPP P
Sbjct: 321 PPSRFGPPGMGGMPPP-PPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRP 371
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/56 (32%), Positives = 19/56 (33%), Gaps = 4/56 (7%)
Frame = +2
Query: 776 GGXGXPPXKXKKXGXXPKKPPXPPPXFXXXGXXK--KKPPXXPPXXXG--GSXPPP 931
G G PP PP PPP + G PP PP G PPP
Sbjct: 329 GMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPP 384
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/51 (33%), Positives = 18/51 (35%), Gaps = 8/51 (15%)
Frame = +3
Query: 834 PPXPPPXFXXXXXKKKNLPXXPRXX--------GGAXPPPPGXXXPGGGXP 962
PP PPP +P P G PPPPG PGG P
Sbjct: 299 PPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPP 349
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 34.7 bits (76), Expect = 0.099
Identities = 20/57 (35%), Positives = 21/57 (36%), Gaps = 2/57 (3%)
Frame = +2
Query: 791 PPXKXKKXGXXPKKPPXPPP-XFXXXGXXKKKPPXXP-PXXXGGSXPPPRXXXPXGG 955
PP + P PP PPP F G PP P GG PPP P G
Sbjct: 313 PPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAG 369
Score = 31.9 bits (69), Expect = 0.70
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = +2
Query: 791 PPXKXKKXGXXPKKPPXPPPXFXXXGXXKKKPPXXPPXXXGGSXPPPRXXXP 946
PP + G PP PPP G PP P G PPP P
Sbjct: 331 PPSRFGPPGMGGMPPP-PPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRP 381
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/56 (32%), Positives = 19/56 (33%), Gaps = 4/56 (7%)
Frame = +2
Query: 776 GGXGXPPXKXKKXGXXPKKPPXPPPXFXXXGXXK--KKPPXXPPXXXG--GSXPPP 931
G G PP PP PPP + G PP PP G PPP
Sbjct: 339 GMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPP 394
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/51 (33%), Positives = 18/51 (35%), Gaps = 8/51 (15%)
Frame = +3
Query: 834 PPXPPPXFXXXXXKKKNLPXXPRXX--------GGAXPPPPGXXXPGGGXP 962
PP PPP +P P G PPPPG PGG P
Sbjct: 309 PPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPP 359
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.3 bits (75), Expect = 0.13
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +2
Query: 785 GXPPXKXKKXGXXPKKPPXPPPXFXXXGXXKKKPPXXPPXXXGGSXPPP 931
G PP G P PPP G PP P GG PPP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 33.9 bits (74), Expect = 0.17
Identities = 21/59 (35%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Frame = +2
Query: 785 GXPPXKXKKXGXXPKK--PPXPPPXFXXXGXXKKKPPXXPPXXXGGSXPPPRXXXPXGG 955
G PP G P PP PPP PP PP G PPP P GG
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP---GGCPPPPPPPPPGG 779
Score = 31.5 bits (68), Expect = 0.92
Identities = 24/65 (36%), Positives = 24/65 (36%), Gaps = 3/65 (4%)
Frame = +2
Query: 776 GGXGXPPXKXKKXGXXPKKPPXP---PPXFXXXGXXKKKPPXXPPXXXGGSXPPPRXXXP 946
GG PP G P PP P PP G PP P GG PPP P
Sbjct: 711 GGPPPPPGLPPITGGPP-PPPPPGGLPP--ITGGPPPPPPPGGLPPISGGPPPPP---PP 764
Query: 947 XGGXP 961
GG P
Sbjct: 765 PGGCP 769
Score = 31.5 bits (68), Expect = 0.92
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +2
Query: 785 GXPPXKXKKXGXXPKKPPXPPPXFXXXGXXKKKPPXXPP 901
G PP G P PP PPP G K PP PP
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPP-----GGFKGGPPPPPP 789
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.3 bits (75), Expect = 0.13
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +2
Query: 785 GXPPXKXKKXGXXPKKPPXPPPXFXXXGXXKKKPPXXPPXXXGGSXPPP 931
G PP G P PPP G PP P GG PPP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 33.9 bits (74), Expect = 0.17
Identities = 21/59 (35%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Frame = +2
Query: 785 GXPPXKXKKXGXXPKK--PPXPPPXFXXXGXXKKKPPXXPPXXXGGSXPPPRXXXPXGG 955
G PP G P PP PPP PP PP G PPP P GG
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP---GGCPPPPPPPPPGG 779
Score = 31.5 bits (68), Expect = 0.92
Identities = 24/65 (36%), Positives = 24/65 (36%), Gaps = 3/65 (4%)
Frame = +2
Query: 776 GGXGXPPXKXKKXGXXPKKPPXP---PPXFXXXGXXKKKPPXXPPXXXGGSXPPPRXXXP 946
GG PP G P PP P PP G PP P GG PPP P
Sbjct: 711 GGPPPPPGLPPITGGPP-PPPPPGGLPP--ITGGPPPPPPPGGLPPISGGPPPPP---PP 764
Query: 947 XGGXP 961
GG P
Sbjct: 765 PGGCP 769
Score = 31.5 bits (68), Expect = 0.92
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +2
Query: 785 GXPPXKXKKXGXXPKKPPXPPPXFXXXGXXKKKPPXXPP 901
G PP G P PP PPP G K PP PP
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPP-----GGFKGGPPPPPP 789
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.3 bits (75), Expect = 0.13
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +2
Query: 785 GXPPXKXKKXGXXPKKPPXPPPXFXXXGXXKKKPPXXPPXXXGGSXPPP 931
G PP G P PPP G PP P GG PPP
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
Score = 33.9 bits (74), Expect = 0.17
Identities = 21/59 (35%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Frame = +2
Query: 785 GXPPXKXKKXGXXPKK--PPXPPPXFXXXGXXKKKPPXXPPXXXGGSXPPPRXXXPXGG 955
G PP G P PP PPP PP PP G PPP P GG
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP---GGCPPPPPPPPPGG 362
Score = 31.5 bits (68), Expect = 0.92
Identities = 24/65 (36%), Positives = 24/65 (36%), Gaps = 3/65 (4%)
Frame = +2
Query: 776 GGXGXPPXKXKKXGXXPKKPPXP---PPXFXXXGXXKKKPPXXPPXXXGGSXPPPRXXXP 946
GG PP G P PP P PP G PP P GG PPP P
Sbjct: 294 GGPPPPPGLPPITGGPP-PPPPPGGLPP--ITGGPPPPPPPGGLPPISGGPPPPP---PP 347
Query: 947 XGGXP 961
GG P
Sbjct: 348 PGGCP 352
Score = 31.5 bits (68), Expect = 0.92
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +2
Query: 785 GXPPXKXKKXGXXPKKPPXPPPXFXXXGXXKKKPPXXPP 901
G PP G P PP PPP G K PP PP
Sbjct: 339 GGPPPPPPPPGGCPPPPPPPPP-----GGFKGGPPPPPP 372
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 33.5 bits (73), Expect = 0.23
Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 5/57 (8%)
Frame = +2
Query: 791 PPXKXKKXGXXPKKPPXPPPXFXXXGXXKKKP-PXXP----PXXXGGSXPPPRXXXP 946
PP + + G P +PP PPP G +P P P P + PPP P
Sbjct: 560 PPTRVESHGLAPARPPPPPPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPPPPP 616
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/50 (32%), Positives = 16/50 (32%), Gaps = 6/50 (12%)
Frame = +2
Query: 824 PKKPPXPPPXFXXXGXXKKKPPXXPP------XXXGGSXPPPRXXXPXGG 955
P PP PP F PP PP G PPP P G
Sbjct: 610 PPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSG 659
Score = 28.3 bits (60), Expect = 8.6
Identities = 19/55 (34%), Positives = 20/55 (36%), Gaps = 9/55 (16%)
Frame = +2
Query: 824 PKKPPXPPPXFXXXGXXKK--KPPXXPPXXXG------GSXPPPRXXXPXG-GXP 961
P PP PPP PP PP G G+ PPP P G G P
Sbjct: 609 PPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGP 663
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 33.5 bits (73), Expect = 0.23
Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 5/57 (8%)
Frame = +2
Query: 791 PPXKXKKXGXXPKKPPXPPPXFXXXGXXKKKP-PXXP----PXXXGGSXPPPRXXXP 946
PP + + G P +PP PPP G +P P P P + PPP P
Sbjct: 386 PPTRVESHGLAPARPPPPPPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPPPPP 442
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/50 (32%), Positives = 16/50 (32%), Gaps = 6/50 (12%)
Frame = +2
Query: 824 PKKPPXPPPXFXXXGXXKKKPPXXPP------XXXGGSXPPPRXXXPXGG 955
P PP PP F PP PP G PPP P G
Sbjct: 436 PPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSG 485
Score = 28.3 bits (60), Expect = 8.6
Identities = 19/55 (34%), Positives = 20/55 (36%), Gaps = 9/55 (16%)
Frame = +2
Query: 824 PKKPPXPPPXFXXXGXXKK--KPPXXPPXXXG------GSXPPPRXXXPXG-GXP 961
P PP PPP PP PP G G+ PPP P G G P
Sbjct: 435 PPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGP 489
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 32.7 bits (71), Expect = 0.40
Identities = 17/56 (30%), Positives = 18/56 (32%), Gaps = 4/56 (7%)
Frame = +2
Query: 791 PPXKXKKXGXXPKKPPXPPPXFXXXGXXKKK----PPXXPPXXXGGSXPPPRXXXP 946
PP P+ PP PPP PP PP G PPP P
Sbjct: 201 PPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPP 256
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 32.7 bits (71), Expect = 0.40
Identities = 17/56 (30%), Positives = 18/56 (32%), Gaps = 4/56 (7%)
Frame = +2
Query: 791 PPXKXKKXGXXPKKPPXPPPXFXXXGXXKKK----PPXXPPXXXGGSXPPPRXXXP 946
PP P+ PP PPP PP PP G PPP P
Sbjct: 187 PPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPP 242
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 32.7 bits (71), Expect = 0.40
Identities = 17/56 (30%), Positives = 18/56 (32%), Gaps = 4/56 (7%)
Frame = +2
Query: 791 PPXKXKKXGXXPKKPPXPPPXFXXXGXXKKK----PPXXPPXXXGGSXPPPRXXXP 946
PP P+ PP PPP PP PP G PPP P
Sbjct: 187 PPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPP 242
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 31.5 bits (68), Expect = 0.92
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +2
Query: 824 PKKPPXPPPXFXXXGXXKKKPPXXPPXXXGGSXPPP 931
P PP PPP PP PP PPP
Sbjct: 67 PPPPPPPPPLISILQQAPPPPPPPPPPTLKAPPPPP 102
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +2
Query: 791 PPXKXKKXGXXPKKPPXPPPXFXXXGXXKKKPPXXPP 901
PP K + G P PP PPP + PP PP
Sbjct: 127 PPRKSRAGGSSP--PPPPPPRVPRTPPPRSPPPRRPP 161
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +2
Query: 815 GXXPKKPPXPPPXFXXXGXXKKKPPXXPPXXXGGSXPPPRXXXP 946
G PP PPP PP PP PPPR P
Sbjct: 116 GDHEASPPPPPPPRKSRAGGSSPPPPPPPRVP--RTPPPRSPPP 157
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +2
Query: 824 PKKPPXPPPXFXXXGXXKKKPPXXPPXXXGGSXPPPRXXXP 946
P P PPP G PP G+ PPPR P
Sbjct: 127 PPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRGYPP 167
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +2
Query: 824 PKKPPXPPPXFXXXGXXKKKPPXXPPXXXGGSXPPPRXXXP 946
P P PPP G PP G+ PPPR P
Sbjct: 127 PPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRGYPP 167
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/63 (33%), Positives = 22/63 (34%), Gaps = 2/63 (3%)
Frame = +2
Query: 779 GXGXPPXKXKKXGXXPKKPPXPPPXFXXXGXXKKKPP--XXPPXXXGGSXPPPRXXXPXG 952
G G PP P + PPP PP PP GGS PPPR P
Sbjct: 251 GSGSPPPPPAAGSPPPPRTGSPPP-----------PPTGSPPPPPAGGSPPPPRAGSPPP 299
Query: 953 GXP 961
P
Sbjct: 300 PPP 302
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/59 (32%), Positives = 19/59 (32%)
Frame = +2
Query: 785 GXPPXKXKKXGXXPKKPPXPPPXFXXXGXXKKKPPXXPPXXXGGSXPPPRXXXPXGGXP 961
G PP G P PP G PP GS PPP P GG P
Sbjct: 235 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP----PAGGSP 289
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +3
Query: 837 PXPPPXFXXXXXKKKNLPXXPRXXGGAXPPPPGXXXPGGGXP 962
P PPP P PR PPPP P G P
Sbjct: 272 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP 313
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/52 (30%), Positives = 19/52 (36%), Gaps = 4/52 (7%)
Frame = +2
Query: 791 PPXKXKKXGXXPKKPPXPPPXFXXXGXXKKKPPXXPPXXXG----GSXPPPR 934
PP + P P PPP + P PP G GS PPP+
Sbjct: 265 PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQ 316
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/63 (33%), Positives = 22/63 (34%), Gaps = 2/63 (3%)
Frame = +2
Query: 779 GXGXPPXKXKKXGXXPKKPPXPPPXFXXXGXXKKKPP--XXPPXXXGGSXPPPRXXXPXG 952
G G PP P + PPP PP PP GGS PPPR P
Sbjct: 272 GSGSPPPPPAAGSPPPPRTGSPPP-----------PPTGSPPPPPAGGSPPPPRAGSPPP 320
Query: 953 GXP 961
P
Sbjct: 321 PPP 323
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/59 (32%), Positives = 19/59 (32%)
Frame = +2
Query: 785 GXPPXKXKKXGXXPKKPPXPPPXFXXXGXXKKKPPXXPPXXXGGSXPPPRXXXPXGGXP 961
G PP G P PP G PP GS PPP P GG P
Sbjct: 256 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP----PAGGSP 310
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +3
Query: 837 PXPPPXFXXXXXKKKNLPXXPRXXGGAXPPPPGXXXPGGGXP 962
P PPP P PR PPPP P G P
Sbjct: 293 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP 334
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/52 (30%), Positives = 19/52 (36%), Gaps = 4/52 (7%)
Frame = +2
Query: 791 PPXKXKKXGXXPKKPPXPPPXFXXXGXXKKKPPXXPPXXXG----GSXPPPR 934
PP + P P PPP + P PP G GS PPP+
Sbjct: 286 PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQ 337
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/63 (33%), Positives = 22/63 (34%), Gaps = 2/63 (3%)
Frame = +2
Query: 779 GXGXPPXKXKKXGXXPKKPPXPPPXFXXXGXXKKKPP--XXPPXXXGGSXPPPRXXXPXG 952
G G PP P + PPP PP PP GGS PPPR P
Sbjct: 257 GSGSPPPPPAAGSPPPPRTGSPPP-----------PPTGSPPPPPAGGSPPPPRAGSPPP 305
Query: 953 GXP 961
P
Sbjct: 306 PPP 308
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/59 (32%), Positives = 19/59 (32%)
Frame = +2
Query: 785 GXPPXKXKKXGXXPKKPPXPPPXFXXXGXXKKKPPXXPPXXXGGSXPPPRXXXPXGGXP 961
G PP G P PP G PP GS PPP P GG P
Sbjct: 241 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP----PAGGSP 295
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +3
Query: 837 PXPPPXFXXXXXKKKNLPXXPRXXGGAXPPPPGXXXPGGGXP 962
P PPP P PR PPPP P G P
Sbjct: 278 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP 319
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/52 (30%), Positives = 19/52 (36%), Gaps = 4/52 (7%)
Frame = +2
Query: 791 PPXKXKKXGXXPKKPPXPPPXFXXXGXXKKKPPXXPPXXXG----GSXPPPR 934
PP + P P PPP + P PP G GS PPP+
Sbjct: 271 PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQ 322
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.3 bits (65), Expect = 2.1
Identities = 21/63 (33%), Positives = 22/63 (34%), Gaps = 6/63 (9%)
Frame = +2
Query: 776 GGXGXPPXKXKKXGXXPKKPPX------PPPXFXXXGXXKKKPPXXPPXXXGGSXPPPRX 937
G G PP G P PP PPP F PP PP G + PPR
Sbjct: 79 GPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAP------PPPPPPSGLGVAPQPPRP 132
Query: 938 XXP 946
P
Sbjct: 133 KTP 135
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +3
Query: 831 NPPXPPPXFXXXXXKKKNLPXXPRXXGGAXPPPPGXXXPGGG 956
N PPP F + P PR PPPP GG
Sbjct: 752 NAGAPPPPFGRGAGPMSSFPPPPRGGMHHMPPPPSFRGGRGG 793
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Frame = +2
Query: 791 PPXKXKKXGXXPKKPPXPPPXFXXXGXXKKKPPXXP--PXXXGGSXPPPRXXXP 946
PP K P + P P P K PP P P S PPP P
Sbjct: 459 PPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPP 512
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/38 (31%), Positives = 12/38 (31%)
Frame = +2
Query: 833 PPXPPPXFXXXGXXKKKPPXXPPXXXGGSXPPPRXXXP 946
PP P P PP PP PPP P
Sbjct: 521 PPPPMPGMAPLSTGAPTPPPPPPVGMANGGPPPPPPLP 558
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/52 (32%), Positives = 17/52 (32%), Gaps = 5/52 (9%)
Frame = +2
Query: 791 PPXKXKKXGXXPKKPPXPPPXFXXXGXXKKKPPXXP-----PXXXGGSXPPP 931
PP G P PP PPP PP P P G PPP
Sbjct: 490 PPPMPSINGHAPNPPP-PPPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPPP 540
>U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical
protein T19A5.3a protein.
Length = 715
Score = 28.7 bits (61), Expect = 6.5
Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 4/51 (7%)
Frame = -3
Query: 915 PPXXLGGXXG-GFFFXXPXXXKXGGGXGGFXGXXPXF---FXFXGGXPXPP 775
PP G G G F GGG GGF G F F G P PP
Sbjct: 467 PPKEFAGAGGFGSFGGGGGGGGFGGGGGGFGGGGGGFGSGSPFGGAAPSPP 517
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Frame = +2
Query: 791 PPXKXKKXGXXPKKPPXPPPXFXXXGXXKKKPPXXP--PXXXGGSXPPPRXXXP 946
PP K P + P P P K PP P P S PPP P
Sbjct: 466 PPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPP 519
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 3/43 (6%)
Frame = +3
Query: 837 PXPPPXFXXXXXKKKNLPXXPRXXGGAXPPP---PGXXXPGGG 956
P P P + P PR GA PPP P PGGG
Sbjct: 763 PSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGG 805
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 3/43 (6%)
Frame = +3
Query: 837 PXPPPXFXXXXXKKKNLPXXPRXXGGAXPPP---PGXXXPGGG 956
P P P + P PR GA PPP P PGGG
Sbjct: 763 PSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGG 805
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 28.3 bits (60), Expect = 8.6
Identities = 20/63 (31%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Frame = -2
Query: 961 GXPPPGXXXPGGGGXAPPXXRGXXGRFFFXXXXXXKXG-GGXGGFFXXXPXFFXFXGGVA 785
G PPG PG G PP G G G GG GG+ P GG
Sbjct: 283 GAFPPGQGGPGMPGSFPPGAPGPGGPGMPGSFAPGAPGPGGPGGYPSGGPGMPGMQGGYP 342
Query: 784 XPP 776
P
Sbjct: 343 GGP 345
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/63 (26%), Positives = 20/63 (31%), Gaps = 9/63 (14%)
Frame = +2
Query: 794 PXKXKKXGXXPKKPPXPPPX---------FXXXGXXKKKPPXXPPXXXGGSXPPPRXXXP 946
P + ++ P PP PPP F PP P PPP P
Sbjct: 756 PIQQQQSSIPPPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPPPP 815
Query: 947 XGG 955
GG
Sbjct: 816 PGG 818
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/63 (26%), Positives = 20/63 (31%), Gaps = 9/63 (14%)
Frame = +2
Query: 794 PXKXKKXGXXPKKPPXPPPX---------FXXXGXXKKKPPXXPPXXXGGSXPPPRXXXP 946
P + ++ P PP PPP F PP P PPP P
Sbjct: 756 PIQQQQSSIPPPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPPPP 815
Query: 947 XGG 955
GG
Sbjct: 816 PGG 818
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 3/43 (6%)
Frame = +3
Query: 837 PXPPPXFXXXXXKKKNLPXXPRXXGGAXPPP---PGXXXPGGG 956
P P P + P PR GA PPP P PGGG
Sbjct: 763 PSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGG 805
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 3/43 (6%)
Frame = +3
Query: 837 PXPPPXFXXXXXKKKNLPXXPRXXGGAXPPP---PGXXXPGGG 956
P P P + P PR GA PPP P PGGG
Sbjct: 763 PSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGG 805
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 28.3 bits (60), Expect = 8.6
Identities = 18/59 (30%), Positives = 23/59 (38%)
Frame = -3
Query: 960 GXPPXGXXSRGGGXEPPXXLGGXXGGFFFXXPXXXKXGGGXGGFXGXXPXFFXFXGGXP 784
G P G ++GG GG GG+ P GG GG+ G + GG P
Sbjct: 111 GAGPIGGGAQGGYAGAGPIGGGAQGGYAGAGPI---GGGAQGGYAGPIGGGAGYQGGAP 166
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,290,574
Number of Sequences: 27780
Number of extensions: 189675
Number of successful extensions: 1408
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 964
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2490012644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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