Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_D02
         (938 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical pr...    30   2.7  
Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical pr...    30   2.7  
Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical pr...    30   2.7  
AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-l...    30   2.7  
AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-l...    30   2.7  
AC024808-1|AAK29927.1|  309|Caenorhabditis elegans Hypothetical ...    29   6.3  
Z48009-2|CAA88077.1|  230|Caenorhabditis elegans Hypothetical pr...    28   8.4  
U41017-5|AAC48216.2|  495|Caenorhabditis elegans C.elegans homeo...    28   8.4  
AJ427855-1|CAD20808.1|  495|Caenorhabditis elegans CEH-21 protei...    28   8.4  

>Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical protein
            ZK593.5 protein.
          Length = 1326

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 11/41 (26%), Positives = 25/41 (60%)
 Frame = +1

Query: 751  YDAAVAKLDRRTLDVDASILQIKQAADRLRXXRXWRHIXNL 873
            YD ++  L R   +V++  L++KQ A+++     W++I ++
Sbjct: 1098 YDESMDALQREMKEVESDNLELKQRANKISKEALWKNIQSM 1138


>Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical
           protein B0457.1b protein.
          Length = 1012

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
 Frame = -3

Query: 393 HSRHHLLRFSRSPFVIRVQTGSVVV---NEKHRTNTNSL*RFIFSVRINNNNTHSTY 232
           H RH++ R   SP V    TGS  +   N+K+ TN+++  R +++  +N+ N  S Y
Sbjct: 820 HKRHNVQRDLMSPGV-NSSTGSDFLYNTNDKYLTNSDTTNRLVYNGIMNHPNQMSVY 875


>Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical
           protein B0457.1a protein.
          Length = 1014

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
 Frame = -3

Query: 393 HSRHHLLRFSRSPFVIRVQTGSVVV---NEKHRTNTNSL*RFIFSVRINNNNTHSTY 232
           H RH++ R   SP V    TGS  +   N+K+ TN+++  R +++  +N+ N  S Y
Sbjct: 822 HKRHNVQRDLMSPGV-NSSTGSDFLYNTNDKYLTNSDTTNRLVYNGIMNHPNQMSVY 877


>AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-like
           protein LAT-1B protein.
          Length = 1012

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
 Frame = -3

Query: 393 HSRHHLLRFSRSPFVIRVQTGSVVV---NEKHRTNTNSL*RFIFSVRINNNNTHSTY 232
           H RH++ R   SP V    TGS  +   N+K+ TN+++  R +++  +N+ N  S Y
Sbjct: 820 HKRHNVQRDLMSPGV-NSSTGSDFLYNTNDKYLTNSDTTNRLVYNGIMNHPNQMSVY 875


>AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-like
           protein LAT-1A protein.
          Length = 1014

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
 Frame = -3

Query: 393 HSRHHLLRFSRSPFVIRVQTGSVVV---NEKHRTNTNSL*RFIFSVRINNNNTHSTY 232
           H RH++ R   SP V    TGS  +   N+K+ TN+++  R +++  +N+ N  S Y
Sbjct: 822 HKRHNVQRDLMSPGV-NSSTGSDFLYNTNDKYLTNSDTTNRLVYNGIMNHPNQMSVY 877


>AC024808-1|AAK29927.1|  309|Caenorhabditis elegans Hypothetical
           protein Y53G8AM.4 protein.
          Length = 309

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 225 GTRKCCECCYYLFEPKI*TATNYSCLFC 308
           G   C ECC  + + K   +T Y C+FC
Sbjct: 259 GHTYCDECCNTILKKKSEYSTKYFCVFC 286


>Z48009-2|CAA88077.1|  230|Caenorhabditis elegans Hypothetical
           protein AH6.3 protein.
          Length = 230

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +3

Query: 414 KPDSEYIKELTDAMNKEILTLQEYADAMKSQSSKDETNKESH 539
           KPD++  KE+     KE    +E     + + SKDET  + H
Sbjct: 135 KPDAKEKKEIEKEKTKEKEKTKEKEKTQEKEKSKDETVPKQH 176


>U41017-5|AAC48216.2|  495|Caenorhabditis elegans C.elegans homeobox
           protein 21 protein.
          Length = 495

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 13/48 (27%), Positives = 27/48 (56%)
 Frame = +3

Query: 642 EKPLEENPQDILNSLPPITRRDRTRINSRIKRSQRIV*CCSSKTRSSN 785
           E   EE+ ++  +  P  +RR+ TR+  ++  SQ+ V    + +R+S+
Sbjct: 131 ENETEEDHEEKEDEAPQSSRRESTRLKRKLLESQKTVQTTGNSSRASS 178


>AJ427855-1|CAD20808.1|  495|Caenorhabditis elegans CEH-21 protein
           protein.
          Length = 495

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 13/48 (27%), Positives = 27/48 (56%)
 Frame = +3

Query: 642 EKPLEENPQDILNSLPPITRRDRTRINSRIKRSQRIV*CCSSKTRSSN 785
           E   EE+ ++  +  P  +RR+ TR+  ++  SQ+ V    + +R+S+
Sbjct: 131 ENETEEDHEEKEDEAPQSSRRESTRLKRKLLESQKTVQTTGNSSRASS 178


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,578,779
Number of Sequences: 27780
Number of extensions: 309591
Number of successful extensions: 806
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 805
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2423194158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)