Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_C23
         (987 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   0.86 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   4.6  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 27.1 bits (57), Expect = 0.86
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = +2

Query: 668 GGGGXXXXXXXPPXGAXXGPXXXGGGGG 751
           GGGG          G+  GP   GGGGG
Sbjct: 203 GGGGSGGGAPGGGGGSSGGPGPGGGGGG 230



 Score = 25.4 bits (53), Expect = 2.6
 Identities = 12/31 (38%), Positives = 13/31 (41%)
 Frame = +1

Query: 661 PPXGGGPXXXXXXXPXGGAXXXXXXGGGGGG 753
           P  GGG          GG+      GGGGGG
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGGPGPGGGGGG 230


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.6 bits (51), Expect = 4.6
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +3

Query: 852 PXGPPPXXPPG 884
           P GPPP  PPG
Sbjct: 527 PLGPPPPPPPG 537



 Score = 24.6 bits (51), Expect = 4.6
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = -2

Query: 416 PPPXXPPXRXPXPXPXXGG 360
           P P  PP   P P P  GG
Sbjct: 583 PAPPPPPPMGPPPSPLAGG 601



 Score = 23.8 bits (49), Expect = 8.1
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = -2

Query: 752 PPPPPPXXXXXXAPP 708
           PPPPPP       PP
Sbjct: 531 PPPPPPGGAVLNIPP 545



 Score = 23.8 bits (49), Expect = 8.1
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -1

Query: 747 PPPPXXXGPXXAPXGG 700
           PPPP   GP  +P  G
Sbjct: 585 PPPPPPMGPPPSPLAG 600


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.315    0.156    0.570 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 550,801
Number of Sequences: 2352
Number of extensions: 11012
Number of successful extensions: 53
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 108119037
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)