Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_C22
         (920 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            28   0.46 
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    28   0.46 
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    28   0.46 
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   9.8  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.9 bits (59), Expect = 0.46
 Identities = 15/38 (39%), Positives = 16/38 (42%)
 Frame = -2

Query: 583 PFSPKXXFFPAI*XGGXPNXPXXFXXLGPXXPPPXGNP 470
           P +P    FPA    G PN P       P  PPP G P
Sbjct: 561 PLNPAQLRFPA----GFPNLPNAQPPPAPPPPPPMGPP 594


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 27.9 bits (59), Expect = 0.46
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +3

Query: 231 PFGKPTLSAHPARFSPEDKYSRHRIIIKKRFGLLLTQQPEP 353
           P  KPT  A P RF P         ++++ F L   Q P+P
Sbjct: 124 PIPKPTPEAEPVRFDPS--------VLRRNFALKTAQTPDP 156


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 27.9 bits (59), Expect = 0.46
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +3

Query: 231 PFGKPTLSAHPARFSPEDKYSRHRIIIKKRFGLLLTQQPEP 353
           P  KPT  A P RF P         ++++ F L   Q P+P
Sbjct: 129 PIPKPTPEAEPVRFDPS--------VLRRNFALKTAQTPDP 161


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.4 bits (48), Expect = 9.8
 Identities = 9/18 (50%), Positives = 9/18 (50%), Gaps = 1/18 (5%)
 Frame = +1

Query: 637 HP-HWXPFFFXGXGGXXG 687
           HP HW P F  G  G  G
Sbjct: 462 HPVHWSPVFMGGRSGILG 479


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 575,078
Number of Sequences: 2352
Number of extensions: 9134
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 100055142
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)