Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_C21
         (856 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1136 + 24218601-24218734,24218769-24219906                       31   1.2  
07_03_0177 - 14770777-14772045                                         29   4.7  
09_01_0112 + 1737438-1737777,1738441-1738511,1738974-1739052,174...    29   6.2  
12_01_0433 - 3402250-3402536,3402644-3403030,3403523-3403957,340...    28   8.3  
07_03_1751 - 29215074-29216270                                         28   8.3  

>07_03_1136 + 24218601-24218734,24218769-24219906
          Length = 423

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 21/63 (33%), Positives = 23/63 (36%), Gaps = 2/63 (3%)
 Frame = -1

Query: 712 GGGGGXXKXXXPXXFFFXGGGGAXPXFFXGXXXXK--GGXFXXFFKTXFXXGGXGXXFXG 539
           GGGGG      P   F  GGGG       G    +  GG     F      GG G    G
Sbjct: 301 GGGGGGGGHGAPELGFSGGGGGGGGGEIAGTVDLRGGGGGAGGVFPPTPDLGGGGGGGGG 360

Query: 538 GSK 530
           G+K
Sbjct: 361 GTK 363


>07_03_0177 - 14770777-14772045
          Length = 422

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 24/65 (36%), Positives = 24/65 (36%), Gaps = 1/65 (1%)
 Frame = -1

Query: 718 LXGGGGGXXKXXXPXXFFFXGGGGAXPXFFXGXXXXKGGXFXXFF-KTXFXXGGXGXXFX 542
           L GGGGG           F  GGG    F  G    KGG F   F K     GG G    
Sbjct: 93  LGGGGGGGLGGGGG----FGKGGGVGGGFGKGGGFGKGGGFGGGFGKGGGIGGGIGHGAG 148

Query: 541 GGSKK 527
           GG  K
Sbjct: 149 GGFGK 153


>09_01_0112 +
           1737438-1737777,1738441-1738511,1738974-1739052,
           1741559-1741641,1741733-1741784,1742038-1742105,
           1742279-1742345,1742426-1742505,1742576-1742640,
           1742785-1742847,1743271-1743427,1743511-1743588,
           1743677-1744219,1744321-1744497,1744534-1744788,
           1745270-1745329,1745874-1745888,1746123-1746135,
           1746819-1746934
          Length = 793

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 19/60 (31%), Positives = 21/60 (35%)
 Frame = -1

Query: 709 GGGGXXKXXXPXXFFFXGGGGAXPXFFXGXXXXKGGXFXXFFKTXFXXGGXGXXFXGGSK 530
           GGGG      P  F   GGGG       G     GG F  +       GG G    GG +
Sbjct: 37  GGGGGGSGSPPHRFSRGGGGGGGD---GGGGGGGGGRFHPYRGPSDHSGGGGYRSGGGGE 93


>12_01_0433 - 3402250-3402536,3402644-3403030,3403523-3403957,
            3404071-3404562,3404718-3404821,3404913-3404994,
            3405085-3405441,3405532-3406089,3406376-3406479,
            3406575-3406650,3406764-3406898,3407192-3407494,
            3407581-3408345,3409459-3412591,3412763-3412882
          Length = 2445

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = +1

Query: 151  ILAFVCLLKLAMCIALLAEQSGAQLGTTVPVPHDIPQAPGKPEENA 288
            + A V L + A+C   ++  + +  G ++PVP DI  AP  PEE A
Sbjct: 2295 VSAPVSLKESAICQEDISVHTESCPGKSLPVPEDI-SAPKSPEERA 2339


>07_03_1751 - 29215074-29216270
          Length = 398

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 21/61 (34%), Positives = 21/61 (34%), Gaps = 3/61 (4%)
 Frame = -1

Query: 709 GGGGXXKXXXPXXFFFXGGGGAXPXFFXGXXXXKGGXFXXFF---KTXFXXGGXGXXFXG 539
           G GG         F   GGGG       G    KGG F   F   K     GG G  F G
Sbjct: 288 GAGGGFGGGKGGGFGGGGGGGGGAGAGGGFGGGKGGGFGGGFGGGKGGGVGGGAGGGFGG 347

Query: 538 G 536
           G
Sbjct: 348 G 348


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,410,880
Number of Sequences: 37544
Number of extensions: 459633
Number of successful extensions: 810
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 787
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)