Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_C20
         (973 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.              46   5e-07
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    25   1.4  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   4.2  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          23   5.5  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    22   7.3  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   7.3  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   9.6  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   9.6  

>DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.
          Length = 120

 Score = 46.0 bits (104), Expect = 5e-07
 Identities = 17/29 (58%), Positives = 20/29 (68%)
 Frame = +2

Query: 509 ECAFCKKNGESVSWYRTHALKDGRGRVKC 595
           EC FC+ NGE  ++YR H LKD  GRV C
Sbjct: 39  ECVFCRNNGEEEAYYRKHLLKDADGRVSC 67


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -2

Query: 393 FLKSTRTASAGNSLPCEET 337
           FL STRTA  G    C+E+
Sbjct: 239 FLSSTRTAETGTIRKCDES 257


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.0 bits (47), Expect = 4.2
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 455 EGTDTDQESRRGVLSRALTLFS 390
           EG +TD + R+G ++R  +L S
Sbjct: 199 EGIETDSDRRKGSIARCWSLDS 220


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 22.6 bits (46), Expect = 5.5
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 238 FFQNASTFQKLWLFFNICRRRWYN 167
           F +   T  + W+  NI R+RW++
Sbjct: 24  FLKRPITGDEKWVVNNIKRKRWWS 47


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 512 CAFCKKNGESVSWYRTHALKDGRGRVK 592
           C   +KNGE+    + HA+K    +VK
Sbjct: 163 CEKYEKNGETYLRIKKHAVKFNPAKVK 189


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 6/28 (21%), Positives = 16/28 (57%)
 Frame = +2

Query: 497 QRHFECAFCKKNGESVSWYRTHALKDGR 580
           ++ ++C  C+K  +  + Y++H    G+
Sbjct: 59  EKTYQCLLCQKAFDQKNLYQSHLRSHGK 86


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 9.6
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = -3

Query: 488 FASDEELRRKLEGTDTDQESRRGVLSRALTLFS 390
           + S + L RK+ G + +  S+  ++  AL +FS
Sbjct: 378 YGSIDTLARKILGYNLEAASKYQIVPSALEIFS 410


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 9.6
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = -3

Query: 488 FASDEELRRKLEGTDTDQESRRGVLSRALTLFS 390
           + S + L RK+ G + +  S+  ++  AL +FS
Sbjct: 378 YGSIDTLARKILGYNLEAASKYQIVPSALEIFS 410


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,305
Number of Sequences: 438
Number of extensions: 4128
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 32048835
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)