Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_C13
(902 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC107417-1|AAI07418.1| 433|Homo sapiens ZFR protein protein. 46 2e-04
BC030540-1|AAH30540.1| 615|Homo sapiens ZFR protein protein. 46 2e-04
AJ314790-1|CAC40818.1| 1057|Homo sapiens putative zinc finger pr... 46 2e-04
AB029009-1|BAA83038.1| 902|Homo sapiens KIAA1086 protein protein. 40 0.009
AY165865-1|AAO18147.1| 2809|Homo sapiens fibrillin-3 short form ... 31 7.6
AY165864-1|AAO18146.1| 2809|Homo sapiens fibrillin-3 short form ... 31 7.6
AY165863-1|AAO18145.1| 2809|Homo sapiens fibrillin-3 short form ... 31 7.6
AB177800-1|BAD16736.1| 2809|Homo sapiens fibrillin 3 protein. 31 7.6
AB177799-1|BAD16735.1| 2809|Homo sapiens fibrillin 3 protein. 31 7.6
AB177798-1|BAD16734.1| 2809|Homo sapiens fibrillin 3 protein. 31 7.6
AB177797-1|BAD16733.1| 2809|Homo sapiens fibrillin 3 protein. 31 7.6
AB053450-1|BAB47408.2| 2816|Homo sapiens fibrillin3 protein. 31 7.6
X69907-1|CAA49532.1| 136|Homo sapiens P1 gene for c subunit of ... 30 10.0
D13118-1|BAA02420.1| 136|Homo sapiens ATP synthase subunit c pr... 30 10.0
CR533449-1|CAG38480.1| 136|Homo sapiens ATP5G1 protein. 30 10.0
BT007230-1|AAP35894.1| 136|Homo sapiens ATP synthase, H+ transp... 30 10.0
BC004963-1|AAH04963.1| 136|Homo sapiens ATP synthase, H+ transp... 30 10.0
>BC107417-1|AAI07418.1| 433|Homo sapiens ZFR protein protein.
Length = 433
Score = 46.0 bits (104), Expect = 2e-04
Identities = 31/92 (33%), Positives = 38/92 (41%), Gaps = 15/92 (16%)
Frame = +3
Query: 633 TAYDTALYNAXSMYVAQQSK-----------AAPGTGWKNY----KTPGTGXXXXXXXXX 767
+ Y+ A+Y+A S Y QQ + AA W K P
Sbjct: 266 SGYEAAVYSAASSYYQQQQQQQKQAAAAAAAAAATAAWTGTTFTKKAPFQNKQLKPKQPP 325
Query: 768 XXXXLHCCDVCRISCAGPXTXKEPLEGXXXXK 863
+H CDVC+ISCAGP T KE LEG K
Sbjct: 326 KPPQIHYCDVCKISCAGPQTYKEHLEGQKHKK 357
>BC030540-1|AAH30540.1| 615|Homo sapiens ZFR protein protein.
Length = 615
Score = 46.0 bits (104), Expect = 2e-04
Identities = 31/92 (33%), Positives = 38/92 (41%), Gaps = 15/92 (16%)
Frame = +3
Query: 633 TAYDTALYNAXSMYVAQQSK-----------AAPGTGWKNY----KTPGTGXXXXXXXXX 767
+ Y+ A+Y+A S Y QQ + AA W K P
Sbjct: 266 SGYEAAVYSAASSYYQQQQQQQKQAAAAAAAAAATAAWTGTTFTKKAPFQNKQLKPKQPP 325
Query: 768 XXXXLHCCDVCRISCAGPXTXKEPLEGXXXXK 863
+H CDVC+ISCAGP T KE LEG K
Sbjct: 326 KPPQIHYCDVCKISCAGPQTYKEHLEGQKHKK 357
>AJ314790-1|CAC40818.1| 1057|Homo sapiens putative zinc finger
protein protein.
Length = 1057
Score = 46.0 bits (104), Expect = 2e-04
Identities = 31/92 (33%), Positives = 38/92 (41%), Gaps = 15/92 (16%)
Frame = +3
Query: 633 TAYDTALYNAXSMYVAQQSK-----------AAPGTGWKNY----KTPGTGXXXXXXXXX 767
+ Y+ A+Y+A S Y QQ + AA W K P
Sbjct: 244 SGYEAAVYSAASSYYQQQQQQQKQAAAAAAAAAATAAWTGTTFTKKAPFQNKQLKPKQPP 303
Query: 768 XXXXLHCCDVCRISCAGPXTXKEPLEGXXXXK 863
+H CDVC+ISCAGP T KE LEG K
Sbjct: 304 KPPQIHYCDVCKISCAGPQTYKEHLEGQKHKK 335
>AB029009-1|BAA83038.1| 902|Homo sapiens KIAA1086 protein protein.
Length = 902
Score = 40.3 bits (90), Expect = 0.009
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +3
Query: 780 LHCCDVCRISCAGPXTXKEPLEGXXXXK 863
LH CD+C+ISCAGP T +E L G K
Sbjct: 233 LHYCDICKISCAGPQTYREHLGGQKHRK 260
>AY165865-1|AAO18147.1| 2809|Homo sapiens fibrillin-3 short form
precursor transcript variant 3 protein.
Length = 2809
Score = 30.7 bits (66), Expect = 7.6
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +2
Query: 467 AQGHIQPRCS-PKGSGCSKTCLR-SSVQCHHCHCXLPHTGIHC-HPGTDTETNNEPR 628
A G + P C +GSGCS +C+ + + C C +TG C P D +N R
Sbjct: 104 ADGTLAPSCGVSRGSGCSVSCMNGGTCRGASCLCQKGYTGTVCGQPICDRGCHNGGR 160
>AY165864-1|AAO18146.1| 2809|Homo sapiens fibrillin-3 short form
precursor transcript variant 2 protein.
Length = 2809
Score = 30.7 bits (66), Expect = 7.6
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +2
Query: 467 AQGHIQPRCS-PKGSGCSKTCLR-SSVQCHHCHCXLPHTGIHC-HPGTDTETNNEPR 628
A G + P C +GSGCS +C+ + + C C +TG C P D +N R
Sbjct: 104 ADGTLAPSCGVSRGSGCSVSCMNGGTCRGASCLCQKGYTGTVCGQPICDRGCHNGGR 160
>AY165863-1|AAO18145.1| 2809|Homo sapiens fibrillin-3 short form
precursor transcript variant 1 protein.
Length = 2809
Score = 30.7 bits (66), Expect = 7.6
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +2
Query: 467 AQGHIQPRCS-PKGSGCSKTCLR-SSVQCHHCHCXLPHTGIHC-HPGTDTETNNEPR 628
A G + P C +GSGCS +C+ + + C C +TG C P D +N R
Sbjct: 104 ADGTLAPSCGVSRGSGCSVSCMNGGTCRGASCLCQKGYTGTVCGQPICDRGCHNGGR 160
>AB177800-1|BAD16736.1| 2809|Homo sapiens fibrillin 3 protein.
Length = 2809
Score = 30.7 bits (66), Expect = 7.6
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +2
Query: 467 AQGHIQPRCS-PKGSGCSKTCLR-SSVQCHHCHCXLPHTGIHC-HPGTDTETNNEPR 628
A G + P C +GSGCS +C+ + + C C +TG C P D +N R
Sbjct: 104 ADGTLAPSCGVSRGSGCSVSCMNGGTCRGASCLCQKGYTGTVCGQPICDRGCHNGGR 160
>AB177799-1|BAD16735.1| 2809|Homo sapiens fibrillin 3 protein.
Length = 2809
Score = 30.7 bits (66), Expect = 7.6
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +2
Query: 467 AQGHIQPRCS-PKGSGCSKTCLR-SSVQCHHCHCXLPHTGIHC-HPGTDTETNNEPR 628
A G + P C +GSGCS +C+ + + C C +TG C P D +N R
Sbjct: 104 ADGTLAPSCGVSRGSGCSVSCMNGGTCRGASCLCQKGYTGTVCGQPICDRGCHNGGR 160
>AB177798-1|BAD16734.1| 2809|Homo sapiens fibrillin 3 protein.
Length = 2809
Score = 30.7 bits (66), Expect = 7.6
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +2
Query: 467 AQGHIQPRCS-PKGSGCSKTCLR-SSVQCHHCHCXLPHTGIHC-HPGTDTETNNEPR 628
A G + P C +GSGCS +C+ + + C C +TG C P D +N R
Sbjct: 104 ADGTLAPSCGVSRGSGCSVSCMNGGTCRGASCLCQKGYTGTVCGQPICDRGCHNGGR 160
>AB177797-1|BAD16733.1| 2809|Homo sapiens fibrillin 3 protein.
Length = 2809
Score = 30.7 bits (66), Expect = 7.6
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +2
Query: 467 AQGHIQPRCS-PKGSGCSKTCLR-SSVQCHHCHCXLPHTGIHC-HPGTDTETNNEPR 628
A G + P C +GSGCS +C+ + + C C +TG C P D +N R
Sbjct: 104 ADGTLAPSCGVSRGSGCSVSCMNGGTCRGASCLCQKGYTGTVCGQPICDRGCHNGGR 160
>AB053450-1|BAB47408.2| 2816|Homo sapiens fibrillin3 protein.
Length = 2816
Score = 30.7 bits (66), Expect = 7.6
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +2
Query: 467 AQGHIQPRCS-PKGSGCSKTCLR-SSVQCHHCHCXLPHTGIHC-HPGTDTETNNEPR 628
A G + P C +GSGCS +C+ + + C C +TG C P D +N R
Sbjct: 111 ADGTLAPSCGVSRGSGCSVSCMNGGTCRGASCLCQKGYTGTVCGQPICDRGCHNGGR 167
>X69907-1|CAA49532.1| 136|Homo sapiens P1 gene for c subunit of
human mitochondrial ATP protein.
Length = 136
Score = 30.3 bits (65), Expect = 10.0
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -2
Query: 190 PGLTTICSTSCSRAVLGSSVSEPKNNYLQPSFTNMP 83
P L C+ R V S ++ P N+ QPS++N P
Sbjct: 11 PALIRCCTRGLIRPVSASFLNSPVNSSKQPSYSNFP 46
>D13118-1|BAA02420.1| 136|Homo sapiens ATP synthase subunit c
precursor protein.
Length = 136
Score = 30.3 bits (65), Expect = 10.0
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -2
Query: 190 PGLTTICSTSCSRAVLGSSVSEPKNNYLQPSFTNMP 83
P L C+ R V S ++ P N+ QPS++N P
Sbjct: 11 PALIRCCTRGLIRPVSASFLNSPVNSSKQPSYSNFP 46
>CR533449-1|CAG38480.1| 136|Homo sapiens ATP5G1 protein.
Length = 136
Score = 30.3 bits (65), Expect = 10.0
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -2
Query: 190 PGLTTICSTSCSRAVLGSSVSEPKNNYLQPSFTNMP 83
P L C+ R V S ++ P N+ QPS++N P
Sbjct: 11 PALIRCCTRGLIRPVSASFLNSPVNSSKQPSYSNFP 46
>BT007230-1|AAP35894.1| 136|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit c
(subunit 9), protein.
Length = 136
Score = 30.3 bits (65), Expect = 10.0
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -2
Query: 190 PGLTTICSTSCSRAVLGSSVSEPKNNYLQPSFTNMP 83
P L C+ R V S ++ P N+ QPS++N P
Sbjct: 11 PALIRCCTRGLIRPVSASFLNSPVNSSKQPSYSNFP 46
>BC004963-1|AAH04963.1| 136|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit C1
(subunit 9) protein.
Length = 136
Score = 30.3 bits (65), Expect = 10.0
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -2
Query: 190 PGLTTICSTSCSRAVLGSSVSEPKNNYLQPSFTNMP 83
P L C+ R V S ++ P N+ QPS++N P
Sbjct: 11 PALIRCCTRGLIRPVSASFLNSPVNSSKQPSYSNFP 46
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,256,139
Number of Sequences: 237096
Number of extensions: 1510787
Number of successful extensions: 4739
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4736
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11659288620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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