Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_C13
(902 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U73125-1|AAB40721.1| 558|Drosophila melanogaster zinc-finger pr... 57 3e-08
AY058357-1|AAL13586.1| 635|Drosophila melanogaster GH12756p pro... 57 3e-08
AE014296-2637|AAF49537.2| 635|Drosophila melanogaster CG5215-PA... 57 3e-08
AE014296-2636|AAO41247.1| 884|Drosophila melanogaster CG5215-PB... 57 3e-08
L13305-1|AAC37169.1| 799|Drosophila melanogaster integrin beta ... 29 8.7
AF305875-1|AAK55517.1| 1060|Drosophila melanogaster putative thr... 29 8.7
AE014134-3326|AAF53952.1| 799|Drosophila melanogaster CG1762-PA... 29 8.7
AE014134-1143|AAF52425.2| 1060|Drosophila melanogaster CG11326-P... 29 8.7
>U73125-1|AAB40721.1| 558|Drosophila melanogaster zinc-finger
protein Zn72D protein.
Length = 558
Score = 57.2 bits (132), Expect = 3e-08
Identities = 37/90 (41%), Positives = 42/90 (46%), Gaps = 13/90 (14%)
Frame = +3
Query: 633 TAYDTALYNAXSMYVAQQSKAAPG-------TGWKNYKT----PGTGXXXXXXXXXXXXX 779
+ YDTALYNA SMYVAQQ + P W K PG
Sbjct: 65 SGYDTALYNAASMYVAQQHQGNPNQKPNGGANNWYQRKMGATIPGATAIRGMRPKAPPRP 124
Query: 780 --LHCCDVCRISCAGPXTXKEPLEGXXXXK 863
LH C+VC+ISCAGP T +E LEG K
Sbjct: 125 QQLHYCEVCKISCAGPQTYREHLEGQKHKK 154
>AY058357-1|AAL13586.1| 635|Drosophila melanogaster GH12756p
protein.
Length = 635
Score = 57.2 bits (132), Expect = 3e-08
Identities = 37/90 (41%), Positives = 42/90 (46%), Gaps = 13/90 (14%)
Frame = +3
Query: 633 TAYDTALYNAXSMYVAQQSKAAPG-------TGWKNYKT----PGTGXXXXXXXXXXXXX 779
+ YDTALYNA SMYVAQQ + P W K PG
Sbjct: 142 SGYDTALYNAASMYVAQQHQGNPNQKPNGGANNWYQRKMGATIPGATAIRGMRPKAPPRP 201
Query: 780 --LHCCDVCRISCAGPXTXKEPLEGXXXXK 863
LH C+VC+ISCAGP T +E LEG K
Sbjct: 202 QQLHYCEVCKISCAGPQTYREHLEGQKHKK 231
>AE014296-2637|AAF49537.2| 635|Drosophila melanogaster CG5215-PA,
isoform A protein.
Length = 635
Score = 57.2 bits (132), Expect = 3e-08
Identities = 37/90 (41%), Positives = 42/90 (46%), Gaps = 13/90 (14%)
Frame = +3
Query: 633 TAYDTALYNAXSMYVAQQSKAAPG-------TGWKNYKT----PGTGXXXXXXXXXXXXX 779
+ YDTALYNA SMYVAQQ + P W K PG
Sbjct: 142 SGYDTALYNAASMYVAQQHQGNPNQKPNGGANNWYQRKMGATIPGATAIRGMRPKAPPRP 201
Query: 780 --LHCCDVCRISCAGPXTXKEPLEGXXXXK 863
LH C+VC+ISCAGP T +E LEG K
Sbjct: 202 QQLHYCEVCKISCAGPQTYREHLEGQKHKK 231
>AE014296-2636|AAO41247.1| 884|Drosophila melanogaster CG5215-PB,
isoform B protein.
Length = 884
Score = 57.2 bits (132), Expect = 3e-08
Identities = 37/90 (41%), Positives = 42/90 (46%), Gaps = 13/90 (14%)
Frame = +3
Query: 633 TAYDTALYNAXSMYVAQQSKAAPG-------TGWKNYKT----PGTGXXXXXXXXXXXXX 779
+ YDTALYNA SMYVAQQ + P W K PG
Sbjct: 142 SGYDTALYNAASMYVAQQHQGNPNQKPNGGANNWYQRKMGATIPGATAIRGMRPKAPPRP 201
Query: 780 --LHCCDVCRISCAGPXTXKEPLEGXXXXK 863
LH C+VC+ISCAGP T +E LEG K
Sbjct: 202 QQLHYCEVCKISCAGPQTYREHLEGQKHKK 231
>L13305-1|AAC37169.1| 799|Drosophila melanogaster integrin beta
subunit protein.
Length = 799
Score = 29.1 bits (62), Expect = 8.7
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +2
Query: 497 PKGSGCSKTCLRSSVQCHHCHCXLPHTGIHCHPGTDTETNNE 622
P G CS+ R + QC C C P+ G C D E +N+
Sbjct: 595 PTGEICSE---RGTCQCEECQCEEPYLGKFCE--IDPEKDNK 631
>AF305875-1|AAK55517.1| 1060|Drosophila melanogaster putative
thrombospondin protein.
Length = 1060
Score = 29.1 bits (62), Expect = 8.7
Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Frame = +2
Query: 497 PKGSGCSKT--CLRSSVQCHHCHCXLPHTGIHCHPGTDTETNNEP 625
P G+ C + CLR H CHC + G G DT+ + P
Sbjct: 527 PDGTVCDRNAVCLRMDNIRHKCHCNVGWAGNGLICGRDTDVDGWP 571
>AE014134-3326|AAF53952.1| 799|Drosophila melanogaster CG1762-PA
protein.
Length = 799
Score = 29.1 bits (62), Expect = 8.7
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +2
Query: 497 PKGSGCSKTCLRSSVQCHHCHCXLPHTGIHCHPGTDTETNNE 622
P G CS+ R + QC C C P+ G C D E +N+
Sbjct: 595 PTGEICSE---RGTCQCEECQCEEPYLGKFCE--IDPEKDNK 631
>AE014134-1143|AAF52425.2| 1060|Drosophila melanogaster CG11326-PA,
isoform A protein.
Length = 1060
Score = 29.1 bits (62), Expect = 8.7
Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Frame = +2
Query: 497 PKGSGCSKT--CLRSSVQCHHCHCXLPHTGIHCHPGTDTETNNEP 625
P G+ C + CLR H CHC + G G DT+ + P
Sbjct: 527 PDGTVCDRNAVCLRMDNIRHKCHCNVGWAGNGLICGRDTDVDGWP 571
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,318,011
Number of Sequences: 53049
Number of extensions: 487661
Number of successful extensions: 1530
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1527
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4403028645
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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