Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_C09
(1049 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC141916-1|AAI41917.1| 170|Homo sapiens PRH2 protein protein. 33 1.3
BC128192-1|AAI28193.1| 171|Homo sapiens PRH1 protein protein. 33 1.3
M13058-1|AAA98808.1| 166|Homo sapiens proline-rich protein 2 pr... 33 2.3
M13057-1|AAA98807.1| 166|Homo sapiens proline-rich protein 1 pr... 33 2.3
K03203-1|AAA60184.1| 166|Homo sapiens PRH1 protein. 33 2.3
K03202-1|AAA60183.1| 166|Homo sapiens PRH2 protein. 33 2.3
BX641094-1|CAE46044.1| 166|Homo sapiens hypothetical protein pr... 33 2.3
BC133676-1|AAI33677.1| 166|Homo sapiens proline-rich protein Ha... 33 2.3
BC095488-1|AAH95488.1| 166|Homo sapiens PRH2 protein protein. 33 2.3
BC064553-1|AAH64553.1| 187|Homo sapiens PRH1 protein protein. 33 2.3
L41162-1|AAC41947.1| 684|Homo sapiens alpha-3 type IX collagen ... 32 3.0
BC096212-1|AAH96212.1| 162|Homo sapiens PRB3 protein protein. 31 5.3
BC011705-1|AAH11705.1| 684|Homo sapiens collagen, type IX, alph... 31 7.0
AL035669-11|CAI95767.2| 191|Homo sapiens collagen type IX alpha... 31 7.0
AL035669-10|CAC12750.1| 684|Homo sapiens collagen type IX alpha... 31 7.0
AF026802-1|AAD47357.1| 684|Homo sapiens alpha-3 type IX collage... 31 7.0
X07704-1|CAA30542.1| 234|Homo sapiens Po protein protein. 31 9.3
S80916-1|AAB50687.2| 238|Homo sapiens parotid 'o' protein protein. 31 9.3
BC130386-1|AAI30387.1| 268|Homo sapiens PRB4 protein protein. 31 9.3
>BC141916-1|AAI41917.1| 170|Homo sapiens PRH2 protein protein.
Length = 170
Score = 33.5 bits (73), Expect = 1.3
Identities = 24/90 (26%), Positives = 29/90 (32%)
Frame = +3
Query: 234 QXGXPRXXAXXPVPXRXEXGRGPPRXRXVXPXXGGPGEXRXXXGGRRPXXXXGXXXXGAP 413
Q G P P + PP+ R P G G R G + G G P
Sbjct: 81 QQGPPPPQGKPQGPPQQGGHPPPPQGRPQGPPQQG-GHPRPPRGRPQGPPQQGGHQQGPP 139
Query: 414 PXPGXXXEGPPXXXXWXXGTPPRXAPXXXR 503
P P +GPP G P +P R
Sbjct: 140 PPPPGKPQGPPPQGGRPQGPPQGQSPQSSR 169
>BC128192-1|AAI28193.1| 171|Homo sapiens PRH1 protein protein.
Length = 171
Score = 33.5 bits (73), Expect = 1.3
Identities = 24/90 (26%), Positives = 29/90 (32%)
Frame = +3
Query: 234 QXGXPRXXAXXPVPXRXEXGRGPPRXRXVXPXXGGPGEXRXXXGGRRPXXXXGXXXXGAP 413
Q G P P + PP+ R P G G R G + G G P
Sbjct: 81 QQGPPPPQGKPQGPPQQGGHPPPPQGRPQGPPQQG-GHPRPPRGRPQGPPQQGGHQQGPP 139
Query: 414 PXPGXXXEGPPXXXXWXXGTPPRXAPXXXR 503
P P +GPP G P +P R
Sbjct: 140 PPPPGKPQGPPPQGGRPQGPPQGQSPQSSR 169
>M13058-1|AAA98808.1| 166|Homo sapiens proline-rich protein 2
protein.
Length = 166
Score = 32.7 bits (71), Expect = 2.3
Identities = 23/86 (26%), Positives = 28/86 (32%)
Frame = +3
Query: 234 QXGXPRXXAXXPVPXRXEXGRGPPRXRXVXPXXGGPGEXRXXXGGRRPXXXXGXXXXGAP 413
Q G P P + PP+ R P G G R G + G G P
Sbjct: 81 QQGPPPPQGKPQGPPQQGGHPPPPQGRPQGPPQQG-GHPRPPRGRPQGPPQQGGHQQGPP 139
Query: 414 PXPGXXXEGPPXXXXWXXGTPPRXAP 491
P P +GPP G P +P
Sbjct: 140 PPPPGKPQGPPPQGGRPQGPPQGQSP 165
>M13057-1|AAA98807.1| 166|Homo sapiens proline-rich protein 1
protein.
Length = 166
Score = 32.7 bits (71), Expect = 2.3
Identities = 23/86 (26%), Positives = 28/86 (32%)
Frame = +3
Query: 234 QXGXPRXXAXXPVPXRXEXGRGPPRXRXVXPXXGGPGEXRXXXGGRRPXXXXGXXXXGAP 413
Q G P P + PP+ R P G G R G + G G P
Sbjct: 81 QQGPPPPQGKPQGPPQQGGHPPPPQGRPQGPPQQG-GHPRPPRGRPQGPPQQGGHQQGPP 139
Query: 414 PXPGXXXEGPPXXXXWXXGTPPRXAP 491
P P +GPP G P +P
Sbjct: 140 PPPPGKPQGPPPQGGRPQGPPQGQSP 165
>K03203-1|AAA60184.1| 166|Homo sapiens PRH1 protein.
Length = 166
Score = 32.7 bits (71), Expect = 2.3
Identities = 23/86 (26%), Positives = 28/86 (32%)
Frame = +3
Query: 234 QXGXPRXXAXXPVPXRXEXGRGPPRXRXVXPXXGGPGEXRXXXGGRRPXXXXGXXXXGAP 413
Q G P P + PP+ R P G G R G + G G P
Sbjct: 81 QQGPPPPQGKPQGPPQQGGHPPPPQGRPQGPPQQG-GHPRPPRGRPQGPPQQGGHQQGPP 139
Query: 414 PXPGXXXEGPPXXXXWXXGTPPRXAP 491
P P +GPP G P +P
Sbjct: 140 PPPPGKPQGPPPQGGRPQGPPQGQSP 165
>K03202-1|AAA60183.1| 166|Homo sapiens PRH2 protein.
Length = 166
Score = 32.7 bits (71), Expect = 2.3
Identities = 23/86 (26%), Positives = 28/86 (32%)
Frame = +3
Query: 234 QXGXPRXXAXXPVPXRXEXGRGPPRXRXVXPXXGGPGEXRXXXGGRRPXXXXGXXXXGAP 413
Q G P P + PP+ R P G G R G + G G P
Sbjct: 81 QQGPPPPQGKPQGPPQQGGHPPPPQGRPQGPPQQG-GHPRPPRGRPQGPPQQGGHQQGPP 139
Query: 414 PXPGXXXEGPPXXXXWXXGTPPRXAP 491
P P +GPP G P +P
Sbjct: 140 PPPPGKPQGPPPQGGRPQGPPQGQSP 165
>BX641094-1|CAE46044.1| 166|Homo sapiens hypothetical protein
protein.
Length = 166
Score = 32.7 bits (71), Expect = 2.3
Identities = 23/86 (26%), Positives = 28/86 (32%)
Frame = +3
Query: 234 QXGXPRXXAXXPVPXRXEXGRGPPRXRXVXPXXGGPGEXRXXXGGRRPXXXXGXXXXGAP 413
Q G P P + PP+ R P G G R G + G G P
Sbjct: 81 QQGPPPPQGKPQGPPQQGGHPPPPQGRPQGPPQQG-GHPRPPRGRPQGPPQQGGHQQGPP 139
Query: 414 PXPGXXXEGPPXXXXWXXGTPPRXAP 491
P P +GPP G P +P
Sbjct: 140 PPPPGKPQGPPPQGGRPQGPPQGQSP 165
>BC133676-1|AAI33677.1| 166|Homo sapiens proline-rich protein
HaeIII subfamily 1 protein.
Length = 166
Score = 32.7 bits (71), Expect = 2.3
Identities = 23/86 (26%), Positives = 28/86 (32%)
Frame = +3
Query: 234 QXGXPRXXAXXPVPXRXEXGRGPPRXRXVXPXXGGPGEXRXXXGGRRPXXXXGXXXXGAP 413
Q G P P + PP+ R P G G R G + G G P
Sbjct: 81 QQGPPPPQGKPQGPPQQGGHPPPPQGRPQGPPQQG-GHPRPPRGRPQGPPQQGGHQQGPP 139
Query: 414 PXPGXXXEGPPXXXXWXXGTPPRXAP 491
P P +GPP G P +P
Sbjct: 140 PPPPGKPQGPPPQGGRPQGPPQGQSP 165
>BC095488-1|AAH95488.1| 166|Homo sapiens PRH2 protein protein.
Length = 166
Score = 32.7 bits (71), Expect = 2.3
Identities = 23/86 (26%), Positives = 28/86 (32%)
Frame = +3
Query: 234 QXGXPRXXAXXPVPXRXEXGRGPPRXRXVXPXXGGPGEXRXXXGGRRPXXXXGXXXXGAP 413
Q G P P + PP+ R P G G R G + G G P
Sbjct: 81 QQGPPPPQGKPQGPPQQGGHPPPPQGRPQGPPQQG-GHPRPPRGRPQGPPQQGGHQQGPP 139
Query: 414 PXPGXXXEGPPXXXXWXXGTPPRXAP 491
P P +GPP G P +P
Sbjct: 140 PPPPGKPQGPPPQGGRPQGPPQGQSP 165
>BC064553-1|AAH64553.1| 187|Homo sapiens PRH1 protein protein.
Length = 187
Score = 32.7 bits (71), Expect = 2.3
Identities = 23/86 (26%), Positives = 28/86 (32%)
Frame = +3
Query: 234 QXGXPRXXAXXPVPXRXEXGRGPPRXRXVXPXXGGPGEXRXXXGGRRPXXXXGXXXXGAP 413
Q G P P + PP+ R P G G R G + G G P
Sbjct: 102 QQGPPPPQGKPQGPPQQGGHPPPPQGRPQGPPQQG-GHPRPPRGRPQGPPQQGGHQQGPP 160
Query: 414 PXPGXXXEGPPXXXXWXXGTPPRXAP 491
P P +GPP G P +P
Sbjct: 161 PPPPGKPQGPPPQGGRPQGPPQGQSP 186
>L41162-1|AAC41947.1| 684|Homo sapiens alpha-3 type IX collagen
protein.
Length = 684
Score = 32.3 bits (70), Expect = 3.0
Identities = 29/108 (26%), Positives = 30/108 (27%), Gaps = 2/108 (1%)
Frame = +3
Query: 714 PPXXXVGPGXXAPPPXXXXPEXXGXGXWVVXXTPPGX-AVXXARGXAGPRGXPSLGPAGV 890
PP PG P P G PPG RG GP G P LG G+
Sbjct: 60 PPGPKGAPGKPGKPGEAGLPGLPGVDGLTGRDGPPGPKGAPGERGSLGPPGPPGLGGKGL 119
Query: 891 -AXXXEXXAXGXXXXXSLXXPRAXXXXRPNXPRXTTXXGPGXPSAXXG 1031
E G L P P P GP P G
Sbjct: 120 PGPPGEAGVSGPPGGIGLRGPPGP----PGLPGLPGPPGPPGPPGHPG 163
>BC096212-1|AAH96212.1| 162|Homo sapiens PRB3 protein protein.
Length = 162
Score = 31.5 bits (68), Expect = 5.3
Identities = 28/99 (28%), Positives = 34/99 (34%), Gaps = 3/99 (3%)
Frame = +3
Query: 231 TQXGXPRXXAXXPVPXRXEXGRGPPRXRXVXPXXGGPGEXRXXXGGRR---PXXXXGXXX 401
+Q P + P R + G P R P G P E R GG + P G
Sbjct: 24 SQEESPSVISGKPEGRRPQGGNQPQR---TPPPPGKP-EGRPPQGGNQSQGPPPRPGKPE 79
Query: 402 XGAPPXPGXXXEGPPXXXXWXXGTPPRXAPXXXRXXXXG 518
G PP G +GPP G PP+ R G
Sbjct: 80 -GQPPQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPPG 117
>BC011705-1|AAH11705.1| 684|Homo sapiens collagen, type IX, alpha 3
protein.
Length = 684
Score = 31.1 bits (67), Expect = 7.0
Identities = 19/60 (31%), Positives = 20/60 (33%), Gaps = 1/60 (1%)
Frame = +3
Query: 714 PPXXXVGPGXXAPPPXXXXPEXXGXGXWVVXXTPPGX-AVXXARGXAGPRGXPSLGPAGV 890
PP PG P P G PPG RG GP G P LG G+
Sbjct: 60 PPGPKGAPGKPGKPGEAGLPGLPGVDGLTGRDGPPGPKGAPGERGSLGPPGPPGLGGKGL 119
>AL035669-11|CAI95767.2| 191|Homo sapiens collagen type IX alpha 3
protein.
Length = 191
Score = 31.1 bits (67), Expect = 7.0
Identities = 19/60 (31%), Positives = 20/60 (33%), Gaps = 1/60 (1%)
Frame = +3
Query: 714 PPXXXVGPGXXAPPPXXXXPEXXGXGXWVVXXTPPGX-AVXXARGXAGPRGXPSLGPAGV 890
PP PG P P G PPG RG GP G P LG G+
Sbjct: 23 PPGPKGAPGKPGKPGEAGLPGLPGVDGLTGRDGPPGPKGAPGERGSLGPPGPPGLGGKGL 82
>AL035669-10|CAC12750.1| 684|Homo sapiens collagen type IX alpha 3
protein.
Length = 684
Score = 31.1 bits (67), Expect = 7.0
Identities = 19/60 (31%), Positives = 20/60 (33%), Gaps = 1/60 (1%)
Frame = +3
Query: 714 PPXXXVGPGXXAPPPXXXXPEXXGXGXWVVXXTPPGX-AVXXARGXAGPRGXPSLGPAGV 890
PP PG P P G PPG RG GP G P LG G+
Sbjct: 60 PPGPKGAPGKPGKPGEAGLPGLPGVDGLTGRDGPPGPKGAPGERGSLGPPGPPGLGGKGL 119
>AF026802-1|AAD47357.1| 684|Homo sapiens alpha-3 type IX collagen
protein.
Length = 684
Score = 31.1 bits (67), Expect = 7.0
Identities = 19/60 (31%), Positives = 20/60 (33%), Gaps = 1/60 (1%)
Frame = +3
Query: 714 PPXXXVGPGXXAPPPXXXXPEXXGXGXWVVXXTPPGX-AVXXARGXAGPRGXPSLGPAGV 890
PP PG P P G PPG RG GP G P LG G+
Sbjct: 60 PPGPKGAPGKPGKPGEAGLPGLPGVDGLTGRDGPPGPKGAPGERGSLGPPGPPGLGGKGL 119
>X07704-1|CAA30542.1| 234|Homo sapiens Po protein protein.
Length = 234
Score = 30.7 bits (66), Expect = 9.3
Identities = 21/77 (27%), Positives = 25/77 (32%), Gaps = 6/77 (7%)
Frame = +3
Query: 267 PVPXRXEXGRGPP----RXRXVXPXXGGPGEXRXXXGGR--RPXXXXGXXXXGAPPXPGX 428
P P +GPP + P G + G+ RP G G PP PG
Sbjct: 26 PPPQGGNQSQGPPPHPGKPERPPPQGGNQSQGPPPHPGKPERPPPQGGNQSQGPPPTPGK 85
Query: 429 XXEGPPXXXXWXXGTPP 479
PP G PP
Sbjct: 86 PEGPPPQGGNQSQGPPP 102
>S80916-1|AAB50687.2| 238|Homo sapiens parotid 'o' protein protein.
Length = 238
Score = 30.7 bits (66), Expect = 9.3
Identities = 21/77 (27%), Positives = 25/77 (32%), Gaps = 6/77 (7%)
Frame = +3
Query: 267 PVPXRXEXGRGPP----RXRXVXPXXGGPGEXRXXXGGR--RPXXXXGXXXXGAPPXPGX 428
P P +GPP + P G + G+ RP G G PP PG
Sbjct: 30 PPPQGGNQSQGPPPPPGKPEGRPPQGGNQSQGPPPHPGKPERPPPQGGNQSQGTPPPPGK 89
Query: 429 XXEGPPXXXXWXXGTPP 479
PP G PP
Sbjct: 90 PEGRPPQGGNQSQGPPP 106
>BC130386-1|AAI30387.1| 268|Homo sapiens PRB4 protein protein.
Length = 268
Score = 30.7 bits (66), Expect = 9.3
Identities = 21/77 (27%), Positives = 25/77 (32%), Gaps = 6/77 (7%)
Frame = +3
Query: 267 PVPXRXEXGRGPP----RXRXVXPXXGGPGEXRXXXGGR--RPXXXXGXXXXGAPPXPGX 428
P P +GPP + P G + G+ RP G G PP PG
Sbjct: 60 PPPQGGNQSQGPPPPPGKPEGRPPQGGNQSQGPPPHPGKPERPPPQGGNQSQGTPPPPGK 119
Query: 429 XXEGPPXXXXWXXGTPP 479
PP G PP
Sbjct: 120 PEGRPPQGGNQSQGPPP 136
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,450,169
Number of Sequences: 237096
Number of extensions: 1320596
Number of successful extensions: 4161
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3966
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 14263098108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -