Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_C09
         (1049 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094861-1|AAM11214.1|  362|Drosophila melanogaster RE22192p pro...    31   2.6  
AE014297-3653|AAF56353.1|  362|Drosophila melanogaster CG7016-PA...    31   2.6  
AY058486-1|AAL13715.1|  416|Drosophila melanogaster GM13876p pro...    30   4.6  
AE014296-1806|AAF50165.3|  416|Drosophila melanogaster CG32056-P...    30   4.6  

>AY094861-1|AAM11214.1|  362|Drosophila melanogaster RE22192p
           protein.
          Length = 362

 Score = 31.1 bits (67), Expect = 2.6
 Identities = 19/54 (35%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
 Frame = +3

Query: 336 GPGEXRXXXGGRRPXXXXGXXXXGAPPX-PGXXXEG-PPXXXXWXXGTPPRXAP 491
           GP       GG  P    G    G PP  PG    G PP    W  G PP   P
Sbjct: 164 GPPPRPGFNGGGPPPPRPGWNGGGPPPPMPGWNGGGPPPPRPGWNGGGPPPPRP 217



 Score = 29.5 bits (63), Expect = 8.0
 Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
 Frame = +3

Query: 390 GXXXXGAPPXPGXXXEG-PPXXXXWXXGTPPRXAP 491
           G    G PP PG    G PP    W  G PP   P
Sbjct: 159 GGGGRGPPPRPGFNGGGPPPPRPGWNGGGPPPPMP 193


>AE014297-3653|AAF56353.1|  362|Drosophila melanogaster CG7016-PA
           protein.
          Length = 362

 Score = 31.1 bits (67), Expect = 2.6
 Identities = 19/54 (35%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
 Frame = +3

Query: 336 GPGEXRXXXGGRRPXXXXGXXXXGAPPX-PGXXXEG-PPXXXXWXXGTPPRXAP 491
           GP       GG  P    G    G PP  PG    G PP    W  G PP   P
Sbjct: 164 GPPPRPGFNGGGPPPPRPGWNGGGPPPPMPGWNGGGPPPPRPGWNGGGPPPPRP 217



 Score = 29.5 bits (63), Expect = 8.0
 Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
 Frame = +3

Query: 390 GXXXXGAPPXPGXXXEG-PPXXXXWXXGTPPRXAP 491
           G    G PP PG    G PP    W  G PP   P
Sbjct: 159 GGGGRGPPPRPGFNGGGPPPPRPGWNGGGPPPPMP 193


>AY058486-1|AAL13715.1|  416|Drosophila melanogaster GM13876p
           protein.
          Length = 416

 Score = 30.3 bits (65), Expect = 4.6
 Identities = 24/81 (29%), Positives = 26/81 (32%)
 Frame = +3

Query: 246 PRXXAXXPVPXRXEXGRGPPRXRXVXPXXGGPGEXRXXXGGRRPXXXXGXXXXGAPPXPG 425
           P+     PVP     G  PP      P  GGPG      GG            G PP  G
Sbjct: 63  PQPAGYAPVPQMPPYGEAPPYGAGQPPYMGGPGGQPPYAGG----------PGGQPPYVG 112

Query: 426 XXXEGPPXXXXWXXGTPPRXA 488
               GP     +  G PP  A
Sbjct: 113 ----GPGGQPHYGGGAPPPQA 129


>AE014296-1806|AAF50165.3|  416|Drosophila melanogaster CG32056-PA,
           isoform A protein.
          Length = 416

 Score = 30.3 bits (65), Expect = 4.6
 Identities = 24/81 (29%), Positives = 26/81 (32%)
 Frame = +3

Query: 246 PRXXAXXPVPXRXEXGRGPPRXRXVXPXXGGPGEXRXXXGGRRPXXXXGXXXXGAPPXPG 425
           P+     PVP     G  PP      P  GGPG      GG            G PP  G
Sbjct: 63  PQPAGYAPVPQMPPYGEAPPYGAGQPPYMGGPGGQPPYAGG----------PGGQPPYVG 112

Query: 426 XXXEGPPXXXXWXXGTPPRXA 488
               GP     +  G PP  A
Sbjct: 113 ----GPGGQPHYGGGAPPPQA 129


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,981,709
Number of Sequences: 53049
Number of extensions: 294987
Number of successful extensions: 994
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 928
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 5372078502
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)