Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_C04
(917 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P43332 Cluster: U1 small nuclear ribonucleoprotein A; n... 184 3e-45
UniRef50_P08579 Cluster: U2 small nuclear ribonucleoprotein B'';... 163 7e-39
UniRef50_P09012 Cluster: U1 small nuclear ribonucleoprotein A; n... 122 1e-26
UniRef50_Q21323 Cluster: Rnp (Rrm rna binding domain) containing... 105 2e-21
UniRef50_Q5YES2 Cluster: Small nuclear ribonucleoprotein; n=1; B... 104 3e-21
UniRef50_Q54J05 Cluster: U2 small nuclear ribonucleoprotein B; n... 99 2e-19
UniRef50_Q5DD61 Cluster: SJCHGC05726 protein; n=2; Bilateria|Rep... 93 7e-18
UniRef50_O74968 Cluster: U1 snRNP-associated protein Usp102; n=1... 88 3e-16
UniRef50_A3AH19 Cluster: Putative uncharacterized protein; n=2; ... 85 3e-15
UniRef50_A2DS99 Cluster: Putative uncharacterized protein; n=1; ... 78 3e-13
UniRef50_Q1WCL9 Cluster: Small nuclear ribonucleoprotein polypep... 77 8e-13
UniRef50_Q5K7D5 Cluster: RNA binding protein, putative; n=1; Fil... 73 8e-12
UniRef50_A1CBE1 Cluster: Small nuclear ribonucleoprotein U1a,U2b... 73 8e-12
UniRef50_Q5BXV2 Cluster: SJCHGC09182 protein; n=1; Schistosoma j... 70 1e-10
UniRef50_Q01EK0 Cluster: U2snrB small nuclear ribonucleoprotein ... 68 3e-10
UniRef50_Q1JSG9 Cluster: Rnp (Rrm rna binding domain) containing... 68 4e-10
UniRef50_UPI0001509B9E Cluster: U1 small nuclear ribonucleoprote... 67 5e-10
UniRef50_Q22CK3 Cluster: U1 small nuclear ribonucleoprotein A; n... 66 9e-10
UniRef50_Q4PGF6 Cluster: Putative uncharacterized protein; n=1; ... 64 4e-09
UniRef50_Q8I2G9 Cluster: Small nuclear ribonucleoprotein (SnRNP)... 61 4e-08
UniRef50_A1CE39 Cluster: RNA binding domain protein; n=6; Pezizo... 60 6e-08
UniRef50_A0DWP2 Cluster: Chromosome undetermined scaffold_67, wh... 60 8e-08
UniRef50_UPI00004983FC Cluster: U1snRNP-specific protein; n=1; E... 58 3e-07
UniRef50_Q0UXL2 Cluster: Putative uncharacterized protein; n=1; ... 57 7e-07
UniRef50_Q6C8A0 Cluster: Similar to tr|O74968 Schizosaccharomyce... 56 2e-06
UniRef50_Q4WNG1 Cluster: U1 small nuclear ribonucleoprotein A, p... 56 2e-06
UniRef50_A7ANK4 Cluster: U2 small nuclear ribonucleoprotein B', ... 55 3e-06
UniRef50_A7AN41 Cluster: U2 small nuclear ribonucleoprotein B', ... 52 3e-05
UniRef50_A0DPF4 Cluster: Chromosome undetermined scaffold_59, wh... 51 4e-05
UniRef50_Q4UD23 Cluster: U1 snRNP protein, putative; n=1; Theile... 50 6e-05
UniRef50_A7P4N7 Cluster: Chromosome chr4 scaffold_6, whole genom... 48 3e-04
UniRef50_A2YSZ7 Cluster: Putative uncharacterized protein; n=2; ... 48 3e-04
UniRef50_A7THH5 Cluster: Putative uncharacterized protein; n=1; ... 48 3e-04
UniRef50_Q6C824 Cluster: Similar to tr|Q41499 Solanum tuberosum ... 48 3e-04
UniRef50_A7QEZ7 Cluster: Chromosome chr16 scaffold_86, whole gen... 48 4e-04
UniRef50_Q7LL14 Cluster: Probable U2 small nuclear ribonucleopro... 48 4e-04
UniRef50_Q7RD14 Cluster: U1 small nuclear ribonucleoprotein a; n... 47 6e-04
UniRef50_A7QMY7 Cluster: Chromosome undetermined scaffold_129, w... 47 8e-04
UniRef50_Q5KMQ5 Cluster: Putative uncharacterized protein; n=1; ... 47 8e-04
UniRef50_Q5A4F9 Cluster: Putative uncharacterized protein USA1; ... 47 8e-04
UniRef50_Q9ASW4 Cluster: At3g21211; n=6; Magnoliophyta|Rep: At3g... 46 0.001
UniRef50_A3LPV2 Cluster: Predicted protein; n=2; Pichia|Rep: Pre... 46 0.001
UniRef50_Q4N0S1 Cluster: Putative uncharacterized protein; n=1; ... 46 0.001
UniRef50_A2E1S1 Cluster: Putative uncharacterized protein; n=1; ... 46 0.001
UniRef50_Q6CVJ3 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 46 0.001
UniRef50_Q4P2S8 Cluster: Putative uncharacterized protein; n=1; ... 45 0.002
UniRef50_Q6JB11 Cluster: MEG5; n=4; Poaceae|Rep: MEG5 - Zea mays... 44 0.004
UniRef50_Q4WUG1 Cluster: RNA binding protein; n=7; Trichocomacea... 44 0.004
UniRef50_Q55ER7 Cluster: Putative uncharacterized protein; n=1; ... 44 0.005
UniRef50_Q57XJ8 Cluster: U2 small nuclear ribonucleoprotein B, p... 44 0.007
UniRef50_A5DEK8 Cluster: Putative uncharacterized protein; n=1; ... 44 0.007
UniRef50_UPI00015B5425 Cluster: PREDICTED: similar to Protein co... 43 0.010
UniRef50_P32605 Cluster: U1 small nuclear ribonucleoprotein A; n... 43 0.010
UniRef50_Q8SWG0 Cluster: Putative RNA-binding protein with some ... 43 0.013
UniRef50_Q22039 Cluster: Mec-8 protein; n=3; Caenorhabditis|Rep:... 42 0.017
UniRef50_Q6CVW1 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 42 0.022
UniRef50_Q6BWJ3 Cluster: Similar to sp|P09012 Homo sapiens U1 sm... 42 0.022
UniRef50_Q6BW78 Cluster: Similar to tr|O74968 Schizosaccharomyce... 42 0.022
UniRef50_A2YPM7 Cluster: Putative uncharacterized protein; n=3; ... 42 0.029
UniRef50_P32831 Cluster: Negative growth regulatory protein NGR1... 42 0.029
UniRef50_A6MD15 Cluster: RNA recognition motif family protein; n... 41 0.039
UniRef50_A0C1D1 Cluster: Chromosome undetermined scaffold_141, w... 41 0.039
UniRef50_A1A6K6 Cluster: At1g76940; n=3; rosids|Rep: At1g76940 -... 41 0.051
UniRef50_O74452 Cluster: Cell wall integrity protein scw1; n=1; ... 41 0.051
UniRef50_Q8H642 Cluster: Putative RNA-binding protein; n=2; Oryz... 40 0.067
UniRef50_Q755N7 Cluster: AFL224Wp; n=1; Eremothecium gossypii|Re... 40 0.067
UniRef50_Q6C1Y4 Cluster: Similarities with sp|P34761 Saccharomyc... 39 0.21
UniRef50_Q6ID24 Cluster: At4g12630; n=6; Arabidopsis thaliana|Re... 38 0.27
UniRef50_Q6FT44 Cluster: Candida glabrata strain CBS138 chromoso... 38 0.27
UniRef50_Q80XZ1 Cluster: SMPTB; n=2; Murinae|Rep: SMPTB - Rattus... 38 0.36
UniRef50_A4V6N1 Cluster: HnRNP A2/B1 protein; n=1; Dugesia japon... 38 0.36
UniRef50_Q66IT0 Cluster: MGC84815 protein; n=1; Xenopus laevis|R... 38 0.47
UniRef50_A2GDE6 Cluster: Putative uncharacterized protein; n=4; ... 38 0.47
UniRef50_Q6E6F7 Cluster: U1 small ribonucleoprotein; n=1; Antono... 38 0.47
UniRef50_A7TIB5 Cluster: Putative uncharacterized protein; n=1; ... 38 0.47
UniRef50_A6QTM8 Cluster: Predicted protein; n=2; Onygenales|Rep:... 38 0.47
UniRef50_Q75EQ7 Cluster: AAR022Wp; n=2; Saccharomycetaceae|Rep: ... 37 0.63
UniRef50_Q6FLF5 Cluster: Similar to sp|P53927 Saccharomyces cere... 37 0.63
UniRef50_UPI0000499255 Cluster: RNA-binding protein; n=3; Entamo... 37 0.83
UniRef50_Q01B63 Cluster: RNA recognition motif; n=2; Ostreococcu... 37 0.83
UniRef50_Q6MVP3 Cluster: Related to heterogeneous nuclear ribonu... 37 0.83
UniRef50_A3LPR6 Cluster: Predicted protein; n=3; Saccharomycetal... 37 0.83
UniRef50_A0DLY6 Cluster: Chromosome undetermined scaffold_56, wh... 36 1.1
UniRef50_Q75BH4 Cluster: ADL371Cp; n=1; Eremothecium gossypii|Re... 36 1.1
UniRef50_Q6CEQ5 Cluster: Similarities with tr|Q8ITY4 Caenorhabdi... 36 1.1
UniRef50_Q9NQ94 Cluster: APOBEC1 complementation factor; n=41; E... 36 1.1
UniRef50_A2FJ46 Cluster: Putative uncharacterized protein; n=1; ... 28 1.1
UniRef50_A2XN97 Cluster: Putative uncharacterized protein; n=3; ... 36 1.4
UniRef50_Q5CRM8 Cluster: T8M16_190-plant like protein with RRM d... 36 1.4
UniRef50_Q1JSB7 Cluster: RNA binding protein, putative; n=1; Tox... 36 1.4
UniRef50_Q2H622 Cluster: Putative uncharacterized protein; n=1; ... 36 1.4
UniRef50_A7RXA3 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 36 1.9
UniRef50_Q0UEV7 Cluster: Putative uncharacterized protein; n=1; ... 36 1.9
UniRef50_Q58T22 Cluster: FPA; n=6; Arabidopsis thaliana|Rep: FPA... 35 2.5
UniRef50_Q4N6Y8 Cluster: RNA-binding protein, putative; n=2; The... 35 2.5
UniRef50_A2DSN3 Cluster: Putative uncharacterized protein; n=1; ... 35 2.5
UniRef50_Q6CJ74 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 35 2.5
UniRef50_P19338 Cluster: Nucleolin; n=39; Deuterostomia|Rep: Nuc... 35 2.5
UniRef50_Q6FIQ5 Cluster: Candida glabrata strain CBS138 chromoso... 35 3.3
UniRef50_Q2H528 Cluster: Putative uncharacterized protein; n=5; ... 35 3.3
UniRef50_A6R5B5 Cluster: Putative uncharacterized protein; n=1; ... 35 3.3
UniRef50_UPI00003645BC Cluster: Homolog of Cyprinus carpio "Nucl... 34 4.4
UniRef50_Q0IYS7 Cluster: Os10g0167500 protein; n=4; Oryza sativa... 34 4.4
UniRef50_A7PLE9 Cluster: Chromosome chr7 scaffold_20, whole geno... 34 4.4
UniRef50_Q59G98 Cluster: TIA1 protein variant; n=5; Euteleostomi... 34 4.4
UniRef50_Q4P4X8 Cluster: Putative uncharacterized protein; n=1; ... 34 4.4
UniRef50_A7TRU0 Cluster: Putative uncharacterized protein; n=1; ... 34 4.4
UniRef50_Q7VEF1 Cluster: Glycosyltransferase of PMT family; n=1;... 34 5.9
UniRef50_Q0WQM7 Cluster: Putative RNA-binding protein; n=7; core... 34 5.9
UniRef50_A7QYR4 Cluster: Chromosome chr5 scaffold_253, whole gen... 34 5.9
UniRef50_Q54C48 Cluster: Putative uncharacterized protein; n=1; ... 34 5.9
UniRef50_A0E3I2 Cluster: Chromosome undetermined scaffold_76, wh... 34 5.9
UniRef50_A6SJV1 Cluster: Putative uncharacterized protein; n=2; ... 34 5.9
UniRef50_P34761 Cluster: Protein WHI3; n=2; Saccharomyces cerevi... 34 5.9
UniRef50_Q7XAN8 Cluster: Putative CUG triplet repeat RNA-binding... 33 7.7
UniRef50_Q5DAB2 Cluster: SJCHGC09413 protein; n=1; Schistosoma j... 33 7.7
UniRef50_A5DZH8 Cluster: Putative uncharacterized protein; n=1; ... 33 7.7
UniRef50_Q6L1U3 Cluster: Putative uncharacterized protein; n=1; ... 33 7.7
UniRef50_Q44560 Cluster: Putative RNA-binding protein rbpA; n=4;... 33 7.7
UniRef50_P40567 Cluster: U2 small nuclear ribonucleoprotein B'';... 33 7.7
>UniRef50_P43332 Cluster: U1 small nuclear ribonucleoprotein A;
n=32; Eumetazoa|Rep: U1 small nuclear ribonucleoprotein
A - Drosophila melanogaster (Fruit fly)
Length = 216
Score = 184 bits (448), Expect = 3e-45
Identities = 98/150 (65%), Positives = 108/150 (72%), Gaps = 3/150 (2%)
Frame = +1
Query: 322 ALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTFQERPKRXXXXXXXXXXXXXXXXXXSR 501
ALR+MQGFPFYDKPM+I YSK DSDI+AK KGTF+ERPK+
Sbjct: 65 ALRTMQGFPFYDKPMQIAYSKSDSDIVAKIKGTFKERPKKVKPPKPAPGTDEKKDKKKK- 123
Query: 502 LIGHGIPGAGILNNVNA--EQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNR 675
P + +N NA EQPPNQILFLTNLP+ET+EMMLSMLFNQFPGFKEVRLVPNR
Sbjct: 124 ------PSSAENSNPNAQTEQPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPNR 177
Query: 676 HDIAFVEFGNXMQSAAAKEALQGFKI-PQH 762
HDIAFVEF +QS AAKEALQGFKI P H
Sbjct: 178 HDIAFVEFTTELQSNAAKEALQGFKITPTH 207
Score = 80.6 bits (190), Expect = 5e-14
Identities = 41/63 (65%), Positives = 45/63 (71%)
Frame = +3
Query: 129 MDIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEIS 308
M++ PN TIY SLYAIFSQFGQILDIVA+KTLKMRGQAFVIFKEI
Sbjct: 1 MEMLPNQTIYINNLNEKIKKEELKKSLYAIFSQFGQILDIVALKTLKMRGQAFVIFKEIG 60
Query: 309 SAT 317
SA+
Sbjct: 61 SAS 63
>UniRef50_P08579 Cluster: U2 small nuclear ribonucleoprotein B'';
n=19; Mammalia|Rep: U2 small nuclear ribonucleoprotein
B'' - Homo sapiens (Human)
Length = 225
Score = 163 bits (395), Expect = 7e-39
Identities = 87/154 (56%), Positives = 102/154 (66%), Gaps = 7/154 (4%)
Frame = +1
Query: 322 ALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTFQERPKRXXXXXXXXXXXXXXXXXXSR 501
ALR +QGFPFY KPMRIQY+K DSDII+K +GTF ++ K+ ++
Sbjct: 65 ALRQLQGFPFYGKPMRIQYAKTDSDIISKMRGTFADKEKKKEKKKAKTVEQTATTT--NK 122
Query: 502 LIGHGIP------GAGILNNVNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRL 663
G G P G N + PPN ILFL NLP+ET+EMMLSMLFNQFPGFKEVRL
Sbjct: 123 KPGQGTPNSANTQGNSTPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRL 182
Query: 664 VPNRHDIAFVEFGNXMQSAAAKEALQGFKI-PQH 762
VP RHDIAFVEF N Q+ AA++ALQGFKI P H
Sbjct: 183 VPGRHDIAFVEFENDGQAGAARDALQGFKITPSH 216
Score = 84.2 bits (199), Expect = 4e-15
Identities = 39/68 (57%), Positives = 47/68 (69%)
Frame = +3
Query: 129 MDIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEIS 308
MDIRPNHTIY SLYA+FSQFG ++DIVA+KT+KMRGQAFVIFKE+
Sbjct: 1 MDIRPNHTIYINNMNDKIKKEELKRSLYALFSQFGHVVDIVALKTMKMRGQAFVIFKELG 60
Query: 309 SATGCFAE 332
S+T +
Sbjct: 61 SSTNALRQ 68
>UniRef50_P09012 Cluster: U1 small nuclear ribonucleoprotein A;
n=35; Euteleostomi|Rep: U1 small nuclear
ribonucleoprotein A - Homo sapiens (Human)
Length = 282
Score = 122 bits (294), Expect = 1e-26
Identities = 55/71 (77%), Positives = 64/71 (90%)
Frame = +1
Query: 550 AEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAAAK 729
+E PPN ILFLTNLP+ET+E+MLSMLFNQFPGFKEVRLVP RHDIAFVEF N +Q+ AA+
Sbjct: 202 SENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHDIAFVEFDNEVQAGAAR 261
Query: 730 EALQGFKIPQH 762
+ALQGFKI Q+
Sbjct: 262 DALQGFKITQN 272
Score = 79.8 bits (188), Expect = 9e-14
Identities = 39/62 (62%), Positives = 44/62 (70%)
Frame = +3
Query: 132 DIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISS 311
+ RPNHTIY SLYAIFSQFGQILDI+ ++LKMRGQAFVIFKE+SS
Sbjct: 5 ETRPNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFKEVSS 64
Query: 312 AT 317
AT
Sbjct: 65 AT 66
Score = 73.7 bits (173), Expect = 6e-12
Identities = 33/40 (82%), Positives = 36/40 (90%)
Frame = +1
Query: 322 ALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTFQERPKR 441
ALRSMQGFPFYDKPMRIQY+K DSDIIAK KGTF ER ++
Sbjct: 68 ALRSMQGFPFYDKPMRIQYAKTDSDIIAKMKGTFVERDRK 107
>UniRef50_Q21323 Cluster: Rnp (Rrm rna binding domain) containing
protein 3; n=7; Bilateria|Rep: Rnp (Rrm rna binding
domain) containing protein 3 - Caenorhabditis elegans
Length = 217
Score = 105 bits (252), Expect = 2e-21
Identities = 55/149 (36%), Positives = 82/149 (55%)
Frame = +1
Query: 322 ALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTFQERPKRXXXXXXXXXXXXXXXXXXSR 501
ALR++QGFPFY KPMRIQY++ DSD+I+++KGTF E+ ++ +
Sbjct: 66 ALRALQGFPFYGKPMRIQYAREDSDVISRAKGTFVEKRQKSTKIAKKPYEKPAKNGKSAA 125
Query: 502 LIGHGIPGAGILNNVNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHD 681
P + PN ILF +N+P+ T + +F+QFPG +EVR +PN D
Sbjct: 126 EPTQKEP-----QETDGPGLPNNILFCSNIPEGTEPEQIQTIFSQFPGLREVRWMPNTKD 180
Query: 682 IAFVEFGNXMQSAAAKEALQGFKIPQHMQ 768
AF+E+ + S A++AL F+I Q
Sbjct: 181 FAFIEYESEDLSEPARQALDNFRITPTQQ 209
Score = 62.5 bits (145), Expect = 1e-08
Identities = 27/62 (43%), Positives = 40/62 (64%)
Frame = +3
Query: 132 DIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISS 311
DI PNHTIY SL+ +F+QFG+I+ +++ + KMRGQA ++FKE+SS
Sbjct: 3 DINPNHTIYVNNLNEKVKKDELKRSLHMVFTQFGEIIQLMSFRKEKMRGQAHIVFKEVSS 62
Query: 312 AT 317
A+
Sbjct: 63 AS 64
>UniRef50_Q5YES2 Cluster: Small nuclear ribonucleoprotein; n=1;
Bigelowiella natans|Rep: Small nuclear ribonucleoprotein
- Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 227
Score = 104 bits (250), Expect = 3e-21
Identities = 59/146 (40%), Positives = 78/146 (53%), Gaps = 2/146 (1%)
Frame = +1
Query: 322 ALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTFQERPKRXXXXXXXXXXXXXXXXXX-S 498
++R MQ F+ K MR+ Y+K SDII+K G++ R KR +
Sbjct: 69 SVRGMQNVDFFGKKMRLSYAKEKSDIISKRDGSYVPREKRKMNSGDMKIEPKVQKTTAVA 128
Query: 499 RLIGHGIPGAGILNNVNAEQ-PPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNR 675
G G P + PPN+ILF NLP + ++ ML LF Q+ GFKEVRLV +
Sbjct: 129 TAKGEGAPAMETDEPEEEDSSPPNKILFARNLPPQATKKMLETLFKQYDGFKEVRLVDGK 188
Query: 676 HDIAFVEFGNXMQSAAAKEALQGFKI 753
DIAF+EF + +SA AKE LQ FKI
Sbjct: 189 PDIAFIEFNDAQESALAKEGLQNFKI 214
Score = 52.8 bits (121), Expect = 1e-05
Identities = 25/61 (40%), Positives = 34/61 (55%)
Frame = +3
Query: 135 IRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSA 314
+RPN TIY +LY FSQFG IL++ A K RGQA+++F ++S A
Sbjct: 7 VRPNQTIYIQNLNEKLKRDELRINLYHAFSQFGNILEVFASKKGNKRGQAWIVFDDLSGA 66
Query: 315 T 317
T
Sbjct: 67 T 67
>UniRef50_Q54J05 Cluster: U2 small nuclear ribonucleoprotein B; n=1;
Dictyostelium discoideum AX4|Rep: U2 small nuclear
ribonucleoprotein B - Dictyostelium discoideum AX4
Length = 241
Score = 98.7 bits (235), Expect = 2e-19
Identities = 60/159 (37%), Positives = 83/159 (52%), Gaps = 15/159 (9%)
Frame = +1
Query: 322 ALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTFQERPK-RXXXXXXXXXXXXXXXXXXS 498
ALR M GF F D+PM+IQY K SD ++K GT+ E+ + R
Sbjct: 70 ALREMNGFNFLDRPMKIQYCKSKSDAVSKLDGTYMEKKREREENDKKGSNKKQDRKSTGQ 129
Query: 499 RLIGHGIPGA--------------GILNNVNAEQPPNQILFLTNLPDETSEMMLSMLFNQ 636
+ PGA G ++ + PPN+ LF+ NLPD+ MMLSMLF+Q
Sbjct: 130 QQQQQKRPGAPTSTTSTTSPTTSNGTVSLQPRDDPPNKTLFVENLPDKCDSMMLSMLFSQ 189
Query: 637 FPGFKEVRLVPNRHDIAFVEFGNXMQSAAAKEALQGFKI 753
F GFKEV +V ++ IAF+EF + ++S A LQ FK+
Sbjct: 190 FQGFKEVHMVESKKGIAFIEFEDEIKSGFAMTNLQHFKV 228
Score = 61.7 bits (143), Expect = 3e-08
Identities = 29/67 (43%), Positives = 40/67 (59%)
Frame = +3
Query: 132 DIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISS 311
DI PN T+Y L +FS++G IL+IV K+LKMRGQAF++FK+I+S
Sbjct: 7 DIPPNQTLYVNNLYEKISKKKLIEQLLLLFSKYGPILEIVGSKSLKMRGQAFIVFKDITS 66
Query: 312 ATGCFAE 332
A+ E
Sbjct: 67 ASNALRE 73
>UniRef50_Q5DD61 Cluster: SJCHGC05726 protein; n=2; Bilateria|Rep:
SJCHGC05726 protein - Schistosoma japonicum (Blood
fluke)
Length = 226
Score = 93.5 bits (222), Expect = 7e-18
Identities = 60/156 (38%), Positives = 82/156 (52%), Gaps = 9/156 (5%)
Frame = +1
Query: 322 ALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTF--------QERPKRXXXXXXXXXXXX 477
A RS+QGF + +PMR+ Y+K DS I KG +ER KR
Sbjct: 65 AYRSLQGFQLFQRPMRVTYAKKDSLQIISLKGVSAEVQKRREEEREKRKRKKMAQRAAAA 124
Query: 478 XXXXXXSRLIGHGIPGAGILNNVNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEV 657
+ +G G G N +QP N ILF++NLP+ET++ ML+MLF+QF GFKE
Sbjct: 125 AAALQAANQSVNGPAGTGGDINALLDQP-NHILFVSNLPEETTDAMLTMLFSQFSGFKEA 183
Query: 658 RLVPNRHDIAFVEFGNXMQSAAAKEALQGFKI-PQH 762
R + FVE+ Q+AAA+ A +GFK+ P H
Sbjct: 184 RRAAG--GVGFVEYDTESQAAAARSAYEGFKLTPTH 217
Score = 73.3 bits (172), Expect = 8e-12
Identities = 32/66 (48%), Positives = 45/66 (68%)
Frame = +3
Query: 129 MDIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEIS 308
MDIRPNHT+Y +LY IF Q G+++DI+AMKT+KMRGQAF+I+++I+
Sbjct: 1 MDIRPNHTLYVNNLNDKVKKNDLKKALYYIFGQHGRLIDIIAMKTMKMRGQAFIIYQDIA 60
Query: 309 SATGCF 326
AT +
Sbjct: 61 CATQAY 66
>UniRef50_O74968 Cluster: U1 snRNP-associated protein Usp102; n=1;
Schizosaccharomyces pombe|Rep: U1 snRNP-associated
protein Usp102 - Schizosaccharomyces pombe (Fission
yeast)
Length = 249
Score = 87.8 bits (208), Expect = 3e-16
Identities = 52/152 (34%), Positives = 77/152 (50%), Gaps = 8/152 (5%)
Frame = +1
Query: 322 ALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTFQ-ERPKRXXXXXXXXXXXXXXXXXXS 498
AL+ +QG+P Y KPM IQYSK SDII + + + E K+ +
Sbjct: 84 ALKDLQGYPLYGKPMMIQYSKSKSDIIVQRESPEEIETRKKDRKNRREMLKRTSALQPAA 143
Query: 499 RLIGHGIP------GAGILNNVNAEQ-PPNQILFLTNLPDETSEMMLSMLFNQFPGFKEV 657
H P GA + +N + PPN++L L N+P E + +L+ +F F GF+EV
Sbjct: 144 PKPTHKKPVPKRNVGAERKSTINEDLLPPNKVLLLQNIPQEVNADVLTQIFEAFSGFQEV 203
Query: 658 RLVPNRHDIAFVEFGNXMQSAAAKEALQGFKI 753
R+VP R IAFVE+ + ++ AK G +
Sbjct: 204 RMVPGRRGIAFVEYDSDREATVAKNGTTGMSL 235
Score = 46.8 bits (106), Expect = 8e-04
Identities = 22/66 (33%), Positives = 35/66 (53%)
Frame = +3
Query: 120 KMTMDIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFK 299
K T P+ T+Y L +F +G+++D+ A KTL+MRGQAFV+F
Sbjct: 17 KETDSQTPSETLYIRNIEEKIRLTMLKRILEHLFGSYGKVIDVQARKTLRMRGQAFVVFD 76
Query: 300 EISSAT 317
+ +A+
Sbjct: 77 NLENAS 82
>UniRef50_A3AH19 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 267
Score = 84.6 bits (200), Expect = 3e-15
Identities = 38/65 (58%), Positives = 49/65 (75%)
Frame = +1
Query: 559 PPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAAAKEAL 738
PPN ILF+ NLP ET+ MML +LF Q+PGF+EVR++ + IAFVE+ + QS A +AL
Sbjct: 190 PPNNILFIQNLPAETTSMMLQILFQQYPGFREVRMIEAKPGIAFVEYEDDSQSMVAMQAL 249
Query: 739 QGFKI 753
QGFKI
Sbjct: 250 QGFKI 254
Score = 68.5 bits (160), Expect = 2e-10
Identities = 32/65 (49%), Positives = 43/65 (66%)
Frame = +3
Query: 132 DIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISS 311
DI PN T+Y SLYA+ SQ+G+ILD+VA+KT K+RGQA+V+F EI++
Sbjct: 5 DIPPNQTVYLRNLNEKVKKEELKRSLYALCSQYGRILDVVALKTPKLRGQAWVVFSEITA 64
Query: 312 ATGCF 326
AT F
Sbjct: 65 ATNAF 69
Score = 39.9 bits (89), Expect = 0.089
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +1
Query: 322 ALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTFQERPKR 441
A R +Q F FY K MR+QY+K SD +A G+ + KR
Sbjct: 68 AFRGLQEFDFYGKRMRVQYAKTRSDCLATEDGSTAPKEKR 107
>UniRef50_A2DS99 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 238
Score = 78.2 bits (184), Expect = 3e-13
Identities = 35/69 (50%), Positives = 46/69 (66%)
Frame = +1
Query: 556 QPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAAAKEA 735
Q PN+ILF+ N+P+ T + +L LF QFPGF EVR +P + IAFVE+ QSA A +
Sbjct: 162 QAPNKILFIQNIPENTDKAVLDFLFGQFPGFVEVRTLPGKQTIAFVEYKTEEQSAVAIQE 221
Query: 736 LQGFKIPQH 762
L GF+I H
Sbjct: 222 LNGFEIENH 230
Score = 43.6 bits (98), Expect = 0.007
Identities = 19/36 (52%), Positives = 27/36 (75%)
Frame = +3
Query: 207 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSA 314
++A FS +GQI+DI A K +K RGQA+V ++ I SA
Sbjct: 28 VFAYFSPYGQIIDISASKAIKKRGQAWVTYQNIESA 63
>UniRef50_Q1WCL9 Cluster: Small nuclear ribonucleoprotein
polypeptide A; n=2; Euteleostomi|Rep: Small nuclear
ribonucleoprotein polypeptide A - Ictalurus punctatus
(Channel catfish)
Length = 156
Score = 76.6 bits (180), Expect = 8e-13
Identities = 37/64 (57%), Positives = 45/64 (70%)
Frame = +3
Query: 126 TMDIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEI 305
+ D+R NHTIY SLYAIFSQFGQILDI+ +T+KMRGQAFVIFKE+
Sbjct: 3 SQDLRLNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVARTVKMRGQAFVIFKEV 62
Query: 306 SSAT 317
+SA+
Sbjct: 63 NSAS 66
Score = 71.7 bits (168), Expect = 2e-11
Identities = 32/40 (80%), Positives = 36/40 (90%)
Frame = +1
Query: 322 ALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTFQERPKR 441
ALRSMQGFPFYDKPMRIQY+K DSDIIAK KGT+ ER ++
Sbjct: 68 ALRSMQGFPFYDKPMRIQYAKQDSDIIAKMKGTYVERDRK 107
>UniRef50_Q5K7D5 Cluster: RNA binding protein, putative; n=1;
Filobasidiella neoformans|Rep: RNA binding protein,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 285
Score = 73.3 bits (172), Expect = 8e-12
Identities = 52/155 (33%), Positives = 72/155 (46%), Gaps = 11/155 (7%)
Frame = +1
Query: 322 ALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGT---FQERPKRXXXXXXXXXXXXXXXXX 492
A + + FP Y K ++I+++K SD I K KG F+E KR
Sbjct: 117 ARKDVNEFPLYGKSIQIKFAKGLSDSIVKRKGDEKEFEEHTKRRLEEKKLKRKNNPLRQK 176
Query: 493 XSRLI------GHGIPGAGI--LNNVNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGF 648
+ G P A L + PPN +LF+ NLPD T+ L +F PG
Sbjct: 177 AQAKLRADTTAGTAGPAAKKQRLQMPDEYLPPNSVLFVQNLPDGTTSEDLREVFEVHPGL 236
Query: 649 KEVRLVPNRHDIAFVEFGNXMQSAAAKEALQGFKI 753
E+R +P + DIAFVEF + + AK+AL FKI
Sbjct: 237 IEIRTIPAKKDIAFVEFADEGAATIAKDALHNFKI 271
Score = 36.7 bits (81), Expect = 0.83
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +3
Query: 204 SLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSA 314
+LY +F + + I+A ++MRGQAFV F +I SA
Sbjct: 78 TLYNLFKPYRPLQPIIAHHNIRMRGQAFVSFSDIESA 114
>UniRef50_A1CBE1 Cluster: Small nuclear ribonucleoprotein U1a,U2b;
n=20; Pezizomycotina|Rep: Small nuclear ribonucleoprotein
U1a,U2b - Aspergillus clavatus
Length = 1390
Score = 73.3 bits (172), Expect = 8e-12
Identities = 53/162 (32%), Positives = 73/162 (45%), Gaps = 21/162 (12%)
Frame = +1
Query: 322 ALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTFQERP--KRXXXXXXXXXXXXXXXXXX 495
A+ + GF +DKPM + Y+K SD +G +E KR
Sbjct: 1212 AIDEVNGFDLFDKPMVLDYAKTKSDATVLREGGSEELEVHKRRRLAEKERKQAHEALEAQ 1271
Query: 496 SRLI-----------GHGIPGAGILNNVNAEQ--------PPNQILFLTNLPDETSEMML 618
+L + GAG+ A PPN+ILFL +LPD + L
Sbjct: 1272 KKLKRPPGPVDTARPAKTVKGAGLKPTTGATAAVIPDEYLPPNKILFLRDLPDSADQDSL 1331
Query: 619 SMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAAAKEALQG 744
+ +F +F GF+EVRLVP R IAFVE+ N + +AKEA G
Sbjct: 1332 TAVFGRFEGFREVRLVPGRKGIAFVEYENESGAISAKEATSG 1373
Score = 47.6 bits (108), Expect = 4e-04
Identities = 21/43 (48%), Positives = 30/43 (69%)
Frame = +3
Query: 204 SLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATGCFAE 332
+L IFS++G IL+IVA LK +GQAF++F ++ SAT E
Sbjct: 1173 ALAEIFSEYGNILEIVAKTNLKAKGQAFIVFDDVESATRAIDE 1215
>UniRef50_Q5BXV2 Cluster: SJCHGC09182 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09182 protein - Schistosoma
japonicum (Blood fluke)
Length = 239
Score = 69.7 bits (163), Expect = 1e-10
Identities = 29/39 (74%), Positives = 35/39 (89%)
Frame = +1
Query: 322 ALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTFQERPK 438
ALRSMQGFP Y+KPMRI ++K+DSD+IAK KGTF +RPK
Sbjct: 116 ALRSMQGFPLYEKPMRIHFAKVDSDVIAKRKGTFVQRPK 154
Score = 68.1 bits (159), Expect = 3e-10
Identities = 32/60 (53%), Positives = 41/60 (68%)
Frame = +3
Query: 138 RPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSAT 317
+PN+TIY SLYA+F QFGQILDI+ +TLKMRGQAFV+F +I+SA+
Sbjct: 55 QPNNTIYINNLNEKIKRDELKKSLYAVFVQFGQILDIITSRTLKMRGQAFVVFDDINSAS 114
>UniRef50_Q01EK0 Cluster: U2snrB small nuclear ribonucleoprotein
U2B, putative; n=2; Ostreococcus|Rep: U2snrB small
nuclear ribonucleoprotein U2B, putative - Ostreococcus
tauri
Length = 221
Score = 68.1 bits (159), Expect = 3e-10
Identities = 46/147 (31%), Positives = 70/147 (47%), Gaps = 3/147 (2%)
Frame = +1
Query: 322 ALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTFQERPKRXXXXXXXXXXXXXXXXXXSR 501
A +Q FPFYDKP++I ++ + SD+I + +G E+ R R
Sbjct: 68 AFEGLQNFPFYDKPLKIAFANLSSDVILRREG---EQISRVASARVVRRAENQERERMRR 124
Query: 502 LIGHGI---PGAGILNNVNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPN 672
+ G+ G +V+A + IL + LP T+ ML++LF QF GFK +
Sbjct: 125 TMMAGVLLSHEEGADCDVSASKERKCIL-VQGLPAATTTHMLTLLFQQFLGFKSANMSAK 183
Query: 673 RHDIAFVEFGNXMQSAAAKEALQGFKI 753
I VEF Q++AA LQGF++
Sbjct: 184 EIGIGQVEFDTPAQASAALNGLQGFRL 210
Score = 52.0 bits (119), Expect = 2e-05
Identities = 23/67 (34%), Positives = 39/67 (58%)
Frame = +3
Query: 126 TMDIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEI 305
T+ + +HT+Y +LY++FS FG+ILDIVA +T ++RGQA++++ +
Sbjct: 3 TVKQQGSHTLYVNNLSEKISKQELRMALYSVFSSFGKILDIVAARTYRLRGQAWIVYDTM 62
Query: 306 SSATGCF 326
A F
Sbjct: 63 DEAQRAF 69
>UniRef50_Q1JSG9 Cluster: Rnp (Rrm rna binding domain) containing
protein, putative; n=1; Toxoplasma gondii|Rep: Rnp (Rrm
rna binding domain) containing protein, putative -
Toxoplasma gondii
Length = 233
Score = 67.7 bits (158), Expect = 4e-10
Identities = 49/149 (32%), Positives = 69/149 (46%), Gaps = 2/149 (1%)
Frame = +1
Query: 322 ALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTFQERPKRXXXXXXXXXXXXXXXXXXSR 501
ALR+ QG F KP+R+QY+K SD I K F+ R
Sbjct: 93 ALRAAQGKDFLGKPLRLQYAKTKSDAILKLNDQFKPRKPNAPRNK--------------- 137
Query: 502 LIGHGIPGAGILNNVNAEQPPNQI-LFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRH 678
+ G A + A Q LF+ NLP + ++ L +LF Q+ G E RL+ R
Sbjct: 138 -VDAGAGSATKAKDGKATGETGQFSLFIENLPPKATKTSLDILFGQYRGHTESRLIEGR- 195
Query: 679 DIAFVEFGNXMQSAAAKEALQGFKI-PQH 762
+AFV+F Q+A A + +QGFK+ P H
Sbjct: 196 GVAFVDFSTQAQAAVAMQGMQGFKVDPSH 224
Score = 48.8 bits (111), Expect = 2e-04
Identities = 24/62 (38%), Positives = 33/62 (53%)
Frame = +3
Query: 132 DIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISS 311
D+ PN T+Y LY FS +G +L++V T MRGQAFV+F ++ S
Sbjct: 31 DVPPNQTLYCNNLNDKLHKQDLQACLYEFFSAYGLVLEVVVRGT-NMRGQAFVVFADLGS 89
Query: 312 AT 317
AT
Sbjct: 90 AT 91
>UniRef50_UPI0001509B9E Cluster: U1 small nuclear ribonucleoprotein
A; n=1; Tetrahymena thermophila SB210|Rep: U1 small
nuclear ribonucleoprotein A - Tetrahymena thermophila
SB210
Length = 247
Score = 67.3 bits (157), Expect = 5e-10
Identities = 44/147 (29%), Positives = 67/147 (45%), Gaps = 3/147 (2%)
Frame = +1
Query: 322 ALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTFQERPKRXXXXXXXXXXXXXXXXXXSR 501
A+ ++ FY K + + ++K SD I K +G + R +
Sbjct: 90 AIEALNRKNFYGKALHLNFAKTKSDAILKREGAYAPRQPKIFNAADFIEERQSNKKQKEN 149
Query: 502 LIGHGIPGAGILNNV---NAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPN 672
L A + N P+ LFL NLP ++ ++ F FPGFKEVRLVP
Sbjct: 150 LKNKESATAKLAAQPLVQNTIIQPHHTLFLENLPINSNTEVIKAFFATFPGFKEVRLVPQ 209
Query: 673 RHDIAFVEFGNXMQSAAAKEALQGFKI 753
+ +AFVE+ + ++ AA +LQ FKI
Sbjct: 210 KR-VAFVEYEDENKATAALASLQSFKI 235
Score = 53.6 bits (123), Expect = 7e-06
Identities = 24/58 (41%), Positives = 36/58 (62%)
Frame = +3
Query: 141 PNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSA 314
PN+TIY L+ +FS++G IL+I A K ++MRGQAFV+F++I+ A
Sbjct: 30 PNNTIYINNLNERISIDDLKQELFKLFSEYGSILEIKAKKNIRMRGQAFVVFEQIACA 87
>UniRef50_Q22CK3 Cluster: U1 small nuclear ribonucleoprotein A; n=1;
Tetrahymena thermophila SB210|Rep: U1 small nuclear
ribonucleoprotein A - Tetrahymena thermophila SB210
Length = 270
Score = 66.5 bits (155), Expect = 9e-10
Identities = 46/151 (30%), Positives = 74/151 (49%), Gaps = 5/151 (3%)
Frame = +1
Query: 322 ALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTF--QERPKRXXXXXXXXXXXXXXXXXX 495
A +++ GF F+DK ++I ++K S+I+ K +G + +++ K+
Sbjct: 111 AKKNLNGFLFFDKELKINFAKQRSEILDKLEGRWVPKKKQKKENNNNAKKVGEQEIGTEQ 170
Query: 496 SRLIGHGIPGAGILNNV--NAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVP 669
I N+ N PN +L L +LP + +L LF Q+PGFKEVRL+
Sbjct: 171 KEQQQQKQQLQQIPLNIQQNELNQPNNVLILEDLPSFVTTDILKALFGQYPGFKEVRLIA 230
Query: 670 NRHDIAFVEFGNXMQSAAAKEALQGFKI-PQ 759
R +AFVEF ++ A LQ F++ PQ
Sbjct: 231 PR-KVAFVEFSQEDEATVALNGLQNFQLTPQ 260
Score = 52.8 bits (121), Expect = 1e-05
Identities = 24/59 (40%), Positives = 35/59 (59%)
Frame = +3
Query: 141 PNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSAT 317
P T+Y LY +F QFG+ILDI+ K+ +RGQA++IFK+I++AT
Sbjct: 51 PKETLYINNLNDKINQEDMKYGLYFLFQQFGEILDIILKKSNTLRGQAWIIFKDITAAT 109
>UniRef50_Q4PGF6 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 314
Score = 64.5 bits (150), Expect = 4e-09
Identities = 27/63 (42%), Positives = 43/63 (68%)
Frame = +1
Query: 559 PPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAAAKEAL 738
PPN++LFL N+P+ + L LF+ +PG+ +V+ +P + +IAFVEF + SA A+ AL
Sbjct: 211 PPNKMLFLQNIPEGVGKGELESLFSAYPGYVDVQTIPGKAEIAFVEFADIPSSATARGAL 270
Query: 739 QGF 747
G+
Sbjct: 271 NGY 273
Score = 33.5 bits (73), Expect = 7.7
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 204 SLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSA 314
+L +FS + +L + A L+MRGQAFV ++ +A
Sbjct: 70 TLTNLFSNYATVLSVTAHTNLRMRGQAFVSLDDVHAA 106
>UniRef50_Q8I2G9 Cluster: Small nuclear ribonucleoprotein (SnRNP),
putative; n=6; Plasmodium|Rep: Small nuclear
ribonucleoprotein (SnRNP), putative - Plasmodium
falciparum (isolate 3D7)
Length = 193
Score = 60.9 bits (141), Expect = 4e-08
Identities = 33/74 (44%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Frame = +1
Query: 547 NAEQPPNQI--LFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSA 720
N E N I L + NLPDE ++ L +LFNQ+PGF EVR +P + +IAFV+F +
Sbjct: 112 NIEHKSNLIYTLLVQNLPDEINKNALEILFNQYPGFYEVRYIPGK-NIAFVDFTAQEHAE 170
Query: 721 AAKEALQGFKIPQH 762
+ LQ FKI H
Sbjct: 171 ISMTGLQNFKITPH 184
Score = 48.4 bits (110), Expect = 3e-04
Identities = 24/62 (38%), Positives = 32/62 (51%)
Frame = +3
Query: 132 DIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISS 311
DI PN T+Y LY F +G I+DI K+ K RGQAF++F I+S
Sbjct: 5 DIPPNQTLYVNNLEDKINVNDLKFLLYEFFCPYGNIIDINIKKSNKGRGQAFIVFNNIAS 64
Query: 312 AT 317
+T
Sbjct: 65 ST 66
>UniRef50_A1CE39 Cluster: RNA binding domain protein; n=6;
Pezizomycotina|Rep: RNA binding domain protein -
Aspergillus clavatus
Length = 194
Score = 60.5 bits (140), Expect = 6e-08
Identities = 26/59 (44%), Positives = 37/59 (62%)
Frame = +3
Query: 141 PNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSAT 317
PN T+Y SLY +FS +G +LD+VAMKT KMRGQA ++FK++ ++T
Sbjct: 22 PNQTLYCTNLPDKLRKYDLRLSLYTLFSTYGTVLDVVAMKTEKMRGQAHIVFKDVQAST 80
Score = 46.0 bits (104), Expect = 0.001
Identities = 20/47 (42%), Positives = 33/47 (70%)
Frame = +1
Query: 283 HLLFSRKFQVPLVALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTF 423
H++F + Q A+R++QGF F+ K M+I Y+K SD+IA+ +GT+
Sbjct: 70 HIVF-KDVQASTQAMRALQGFDFFGKEMKIVYAKGSSDVIARLRGTY 115
>UniRef50_A0DWP2 Cluster: Chromosome undetermined scaffold_67, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_67,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 228
Score = 60.1 bits (139), Expect = 8e-08
Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 2/151 (1%)
Frame = +1
Query: 322 ALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTFQERPKRXXXXXXXXXXXXXXXXXXSR 501
A ++ G YDKP+ I+++ S I + +G F + K+ +
Sbjct: 78 AKSALTGMMVYDKPLIIEFAYKKSVIFDRMEGKFYYKQKQQKELQPTLPTELVKEKKQKK 137
Query: 502 LIGHGIPGAGILNN--VNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNR 675
L LNN V + N +L + +LP +E+MLS LF Q+PG+ ++L+ R
Sbjct: 138 LEDK-------LNNNPVFNQGEVNNVLLIESLPPFVTEIMLSELFRQYPGYSLIKLISAR 190
Query: 676 HDIAFVEFGNXMQSAAAKEALQGFKIPQHMQ 768
+AFVE+ N Q+ A + L FK+ Q
Sbjct: 191 -GLAFVEYQNDDQATVALKGLNNFKVTPECQ 220
Score = 56.0 bits (129), Expect = 1e-06
Identities = 26/66 (39%), Positives = 37/66 (56%)
Frame = +3
Query: 120 KMTMDIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFK 299
++ D P T+Y LY +FSQFG++L IV KT K+RGQAF++F+
Sbjct: 11 QINQDSAPKETLYVTGLNDKIKLEDLKFVLYILFSQFGEVLQIVMKKTQKLRGQAFIVFQ 70
Query: 300 EISSAT 317
I+ AT
Sbjct: 71 NITYAT 76
>UniRef50_UPI00004983FC Cluster: U1snRNP-specific protein; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: U1snRNP-specific
protein - Entamoeba histolytica HM-1:IMSS
Length = 232
Score = 58.0 bits (134), Expect = 3e-07
Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 4/141 (2%)
Frame = +1
Query: 322 ALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKG---TFQERPKRXXXXXXXXXXXXXXXXX 492
A+ S+Q +D+PM I YSK++SDII K +G T + +PK+
Sbjct: 79 AMESLQNHELFDRPMHINYSKVESDIIVKKQGKEITRERKPKQ--IKVQIEKTLEHEESP 136
Query: 493 XSRLIGHGIPGAGILNNVNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVR-LVP 669
++ I L + + N LF+ ++P S+ L LF Q GF EVR +V
Sbjct: 137 INQDIEKKESNETKLPPNSPTKYTNNRLFIKSVPQNVSKQRLEELFKQQEGFVEVRYIVI 196
Query: 670 NRHDIAFVEFGNXMQSAAAKE 732
+ +AF+EF + + S A +
Sbjct: 197 KGNAVAFIEFKDEISSEKAMQ 217
Score = 40.7 bits (91), Expect = 0.051
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = +3
Query: 204 SLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSA 314
SL +F +G +L + K+LKMRGQAFVI+ SA
Sbjct: 40 SLNTVFGAYGNVLQVCVRKSLKMRGQAFVIYDTKESA 76
>UniRef50_Q0UXL2 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 177
Score = 56.8 bits (131), Expect = 7e-07
Identities = 24/59 (40%), Positives = 37/59 (62%)
Frame = +3
Query: 141 PNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSAT 317
PN T+Y SLY +F+ +G +LD+VA+KT KMRGQA V+F+++ ++T
Sbjct: 20 PNRTLYVRNLNDKLPKEDLKRSLYMLFATYGVVLDVVALKTAKMRGQAHVVFRDLDAST 78
Score = 45.2 bits (102), Expect = 0.002
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = +1
Query: 283 HLLFSRKFQVPLVALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTFQ-ERPKR 441
H++F R A+R++QGF F+ K M+I Y+K SD IAK GT++ P+R
Sbjct: 68 HVVF-RDLDASTQAMRALQGFTFFGKDMQIAYAKTKSDTIAKLDGTYKMPEPER 120
>UniRef50_Q6C8A0 Cluster: Similar to tr|O74968 Schizosaccharomyces
pombe Small nuclear ribonucleoprotein; n=1; Yarrowia
lipolytica|Rep: Similar to tr|O74968 Schizosaccharomyces
pombe Small nuclear ribonucleoprotein - Yarrowia
lipolytica (Candida lipolytica)
Length = 226
Score = 55.6 bits (128), Expect = 2e-06
Identities = 29/65 (44%), Positives = 38/65 (58%)
Frame = +1
Query: 559 PPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAAAKEAL 738
P ++IL L NLP S+ ++ LF+ PG+ EVRLVP R + F EF Q+ AKE
Sbjct: 151 PVHKILLLQNLPKSASQDTVAALFSDLPGYVEVRLVPAR-QVGFAEFETEAQAVVAKEKS 209
Query: 739 QGFKI 753
QG I
Sbjct: 210 QGADI 214
Score = 44.8 bits (101), Expect = 0.003
Identities = 23/60 (38%), Positives = 31/60 (51%)
Frame = +3
Query: 135 IRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSA 314
I P TIY +L I ++G +LD+VA L++RGQAFV+F I SA
Sbjct: 4 IAPCETIYIRNINEKIKIPTLKTTLKEICKEYGDVLDVVAHGNLRLRGQAFVVFDSIDSA 63
>UniRef50_Q4WNG1 Cluster: U1 small nuclear ribonucleoprotein A,
putative; n=8; Eurotiomycetidae|Rep: U1 small nuclear
ribonucleoprotein A, putative - Aspergillus fumigatus
(Sartorya fumigata)
Length = 294
Score = 55.6 bits (128), Expect = 2e-06
Identities = 22/38 (57%), Positives = 32/38 (84%)
Frame = +3
Query: 204 SLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSAT 317
SLY +FS +G +LD+VAMKT KMRGQA ++FK++ ++T
Sbjct: 124 SLYTLFSTYGTVLDVVAMKTEKMRGQAHIVFKDVQAST 161
>UniRef50_A7ANK4 Cluster: U2 small nuclear ribonucleoprotein B',
putative; n=3; Piroplasmida|Rep: U2 small nuclear
ribonucleoprotein B', putative - Babesia bovis
Length = 213
Score = 54.8 bits (126), Expect = 3e-06
Identities = 25/71 (35%), Positives = 41/71 (57%)
Frame = +1
Query: 541 NVNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSA 720
+ N+E LF+ NL + ++M + +LF Q+PG+K+ R V + +AFV+F Q
Sbjct: 128 DANSEGGERHTLFVENLHPDMNKMSVELLFQQYPGYKDTRFVEGK-CVAFVDFATAYQGE 186
Query: 721 AAKEALQGFKI 753
A + LQGF +
Sbjct: 187 VALQGLQGFSV 197
Score = 52.8 bits (121), Expect = 1e-05
Identities = 26/62 (41%), Positives = 33/62 (53%)
Frame = +3
Query: 141 PNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATG 320
PNHT+Y LY +G+I+DI A +T K+RGQAFV F EI+SA
Sbjct: 14 PNHTLYVSNLDDRIHVNDLRKLLYEFLIPYGEIVDISARRTQKLRGQAFVSFSEIASAIS 73
Query: 321 CF 326
F
Sbjct: 74 AF 75
>UniRef50_A7AN41 Cluster: U2 small nuclear ribonucleoprotein B',
putative; n=1; Babesia bovis|Rep: U2 small nuclear
ribonucleoprotein B', putative - Babesia bovis
Length = 285
Score = 51.6 bits (118), Expect = 3e-05
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +3
Query: 111 FVIKMTMD--IRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQA 284
+ +K+ D I PN TIY L +F +FG+ILDIVA+ + +GQA
Sbjct: 17 YTMKVDADPSIPPNQTIYIKNINERIKVDVLKAELLKMFGRFGKILDIVALTSFWRKGQA 76
Query: 285 FVIFKEISSATGCFAE 332
F+IF + SAT E
Sbjct: 77 FIIFDNVESATNALHE 92
Score = 43.6 bits (98), Expect = 0.007
Identities = 21/60 (35%), Positives = 36/60 (60%)
Frame = +1
Query: 562 PNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAAAKEALQ 741
PN+ LF+ LP+ S ++ +F + GF+E R++ R +AF++F N + A +ALQ
Sbjct: 211 PNRTLFVEGLPEGVSLADVNAVFARSVGFQEARVIAAR-KVAFIDFDNEFNAGCAMQALQ 269
Score = 41.5 bits (93), Expect = 0.029
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +1
Query: 322 ALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTFQERPK 438
AL MQGF M+I Y++ SDIIAK +GT++ RP+
Sbjct: 89 ALHEMQGFVMDGHAMQINYAREKSDIIAKGQGTYRPRPE 127
>UniRef50_A0DPF4 Cluster: Chromosome undetermined scaffold_59, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_59,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 275
Score = 51.2 bits (117), Expect = 4e-05
Identities = 23/58 (39%), Positives = 34/58 (58%)
Frame = +3
Query: 141 PNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSA 314
PN T+Y +LYA+FSQ G++LDI+ K + MRGQAF++ ++ SA
Sbjct: 46 PNKTLYINRLNEKVTAEEMRQTLYALFSQSGKVLDIIVKKNILMRGQAFILMEDEESA 103
>UniRef50_Q4UD23 Cluster: U1 snRNP protein, putative; n=1; Theileria
annulata|Rep: U1 snRNP protein, putative - Theileria
annulata
Length = 346
Score = 50.4 bits (115), Expect = 6e-05
Identities = 26/79 (32%), Positives = 39/79 (49%)
Frame = +3
Query: 96 KTKLSFVIKMTMDIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMR 275
K + VI+ I PN T+Y L +F ++G+IL IVAMK+ R
Sbjct: 33 KELYTMVIEADPSIPPNQTLYIKNINDRIKIDVLKRDLMELFGKYGKILQIVAMKSFWRR 92
Query: 276 GQAFVIFKEISSATGCFAE 332
GQA+++F + S+T E
Sbjct: 93 GQAWIVFDNVESSTQAMNE 111
Score = 48.4 bits (110), Expect = 3e-04
Identities = 21/51 (41%), Positives = 33/51 (64%)
Frame = +1
Query: 565 NQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQS 717
N+ LF+ NLPD S ++ LF+ PGF E +L+ ++H +AF++F N S
Sbjct: 248 NRTLFVENLPDNISHNDVNNLFHNMPGFVETKLIASKH-VAFIDFDNEFNS 297
Score = 38.7 bits (86), Expect = 0.21
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +1
Query: 322 ALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTFQERPK 438
A+ +QGF Y ++I Y+ SDI++ +GTF +RPK
Sbjct: 108 AMNELQGFKIYGHTLQINYALEKSDIVSIPEGTFVQRPK 146
Score = 34.3 bits (75), Expect = 4.4
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Frame = +1
Query: 559 PPNQILFLTNLPD----ETSEMMLSMLFNQFPGFKEVRLVPN--RHDIAFVEFGNXMQSA 720
PPNQ L++ N+ D + + L LF ++ ++ + + R A++ F N S
Sbjct: 47 PPNQTLYIKNINDRIKIDVLKRDLMELFGKYGKILQIVAMKSFWRRGQAWIVFDNVESST 106
Query: 721 AAKEALQGFKIPQH 762
A LQGFKI H
Sbjct: 107 QAMNELQGFKIYGH 120
>UniRef50_A7P4N7 Cluster: Chromosome chr4 scaffold_6, whole genome
shotgun sequence; n=3; Magnoliophyta|Rep: Chromosome
chr4 scaffold_6, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 332
Score = 48.4 bits (110), Expect = 3e-04
Identities = 33/81 (40%), Positives = 43/81 (53%), Gaps = 11/81 (13%)
Frame = +1
Query: 541 NVNAEQPPNQ---ILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPN--RHD------IA 687
NV + PP Q ILF+ LP + + + LF F GFKE+R+V RH +
Sbjct: 220 NVESLPPPVQESNILFVDGLPKDCTRREVGHLFRPFIGFKEIRVVHKEPRHSGDKAMVLC 279
Query: 688 FVEFGNXMQSAAAKEALQGFK 750
FVEF + S A EALQG+K
Sbjct: 280 FVEFNDASCSRTALEALQGYK 300
>UniRef50_A2YSZ7 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 235
Score = 48.4 bits (110), Expect = 3e-04
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Frame = +1
Query: 511 HGIPGAGILNNVNA-EQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV-PNRHDI 684
+ + + NN N + PP LF+ NL + E L LF+ PG+K+++++ +R+ +
Sbjct: 136 YNFSSSSLKNNQNTKDNPPCNTLFIGNLGETVIEEELRSLFSVQPGYKQMKVLRQDRNTV 195
Query: 685 AFVEFGNXMQSAAAKEALQGFKIP 756
F+EF + ++A LQG IP
Sbjct: 196 CFIEFEDVNAASAVHHNLQGAVIP 219
>UniRef50_A7THH5 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 296
Score = 48.4 bits (110), Expect = 3e-04
Identities = 27/60 (45%), Positives = 36/60 (60%)
Frame = +1
Query: 559 PPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAAAKEAL 738
P N IL + NLP+ T+E+ L LF Q G KEVRLV R ++AF+E+ N + K L
Sbjct: 222 PANNILLVQNLPNGTTEVQLKELFAQ-TGLKEVRLVSVR-NLAFIEYSNIQNATEIKNKL 279
>UniRef50_Q6C824 Cluster: Similar to tr|Q41499 Solanum tuberosum
Spliceosomal protein; n=1; Yarrowia lipolytica|Rep:
Similar to tr|Q41499 Solanum tuberosum Spliceosomal
protein - Yarrowia lipolytica (Candida lipolytica)
Length = 146
Score = 48.0 bits (109), Expect = 3e-04
Identities = 24/58 (41%), Positives = 32/58 (55%)
Frame = +3
Query: 141 PNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSA 314
P+ T+Y LY FS +G ILDIVAMK +MRGQA V+F +I ++
Sbjct: 29 PSPTLYVKNLTDKCTKSDLKRYLYMRFSSYGHILDIVAMKNERMRGQAHVVFNDIDAS 86
>UniRef50_A7QEZ7 Cluster: Chromosome chr16 scaffold_86, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr16 scaffold_86, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 230
Score = 47.6 bits (108), Expect = 4e-04
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 10/78 (12%)
Frame = +1
Query: 559 PPN--QILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV--PNRHD------IAFVEFGNX 708
PP+ LF+ LP + +S +F F G+KEVRLV +RH + FV+F +
Sbjct: 126 PPDASSTLFVEGLPANCTRREVSHIFRPFVGYKEVRLVSKESRHSGGDPLVLCFVDFVSP 185
Query: 709 MQSAAAKEALQGFKIPQH 762
+A A +ALQG+K +H
Sbjct: 186 AHAATAMDALQGYKFDEH 203
>UniRef50_Q7LL14 Cluster: Probable U2 small nuclear
ribonucleoprotein B''; n=1; Schizosaccharomyces
pombe|Rep: Probable U2 small nuclear ribonucleoprotein
B'' - Schizosaccharomyces pombe (Fission yeast)
Length = 111
Score = 47.6 bits (108), Expect = 4e-04
Identities = 21/37 (56%), Positives = 30/37 (81%)
Frame = +3
Query: 204 SLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSA 314
+LY +FS +G ++DIVA+KT KMRGQA V+F + S+A
Sbjct: 23 ALYMLFSTYGTVVDIVALKTPKMRGQAHVVFFDPSAA 59
>UniRef50_Q7RD14 Cluster: U1 small nuclear ribonucleoprotein a; n=7;
Plasmodium|Rep: U1 small nuclear ribonucleoprotein a -
Plasmodium yoelii yoelii
Length = 508
Score = 47.2 bits (107), Expect = 6e-04
Identities = 25/72 (34%), Positives = 38/72 (52%)
Frame = +3
Query: 102 KLSFVIKMTMDIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQ 281
K + VI +I PN T+Y SL IF+Q+G I DI+ MK+ +GQ
Sbjct: 172 KYNKVITADPNIPPNETLYIKNLNDKIKCEDMKKSLKNIFNQYGLIEDIIVMKSFWRKGQ 231
Query: 282 AFVIFKEISSAT 317
A++++ I S+T
Sbjct: 232 AWIVYDTIESST 243
Score = 39.9 bits (89), Expect = 0.089
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +1
Query: 322 ALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTFQERPK 438
AL ++QGF + K M+I YS SD+ K GTF ER K
Sbjct: 245 ALNALQGFVLFGKIMQINYSHNKSDVHTKRNGTFVERSK 283
Score = 39.1 bits (87), Expect = 0.16
Identities = 17/55 (30%), Positives = 33/55 (60%)
Frame = +1
Query: 562 PNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAAA 726
P +ILF+ N+ + + + +F F GF E R++P R ++AFV++ + + +A
Sbjct: 394 PYKILFVENVDENVNTEAFNDIFKAFSGFVEARIIPQR-NVAFVDYTDESSATSA 447
>UniRef50_A7QMY7 Cluster: Chromosome undetermined scaffold_129,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome undetermined scaffold_129, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 260
Score = 46.8 bits (106), Expect = 8e-04
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 10/98 (10%)
Frame = +1
Query: 499 RLIGHGIPGAGILNNVNAEQPPN--QILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV-- 666
R GH + + A PP+ L++ LP +++ ++ +F F G+KEVRLV
Sbjct: 62 RRFGHQLDAIIRPSRETAPLPPDASSTLYVEGLPPDSTRREVAHIFRPFVGYKEVRLVSK 121
Query: 667 PNRHD------IAFVEFGNXMQSAAAKEALQGFKIPQH 762
++H + FV+F + +A A ALQG+KI +H
Sbjct: 122 ESKHRGRDPLVLCFVDFTSPACAATALSALQGYKISEH 159
>UniRef50_Q5KMQ5 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 282
Score = 46.8 bits (106), Expect = 8e-04
Identities = 23/59 (38%), Positives = 34/59 (57%)
Frame = +3
Query: 141 PNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSAT 317
P+ T+Y LYA+FS +G+++D+VA K RGQAFV+F+E +AT
Sbjct: 25 PSPTLYVSGLETKTKKPELRQQLYALFSPYGRVIDVVAKKHDGGRGQAFVVFEEQVAAT 83
>UniRef50_Q5A4F9 Cluster: Putative uncharacterized protein USA1;
n=1; Candida albicans|Rep: Putative uncharacterized
protein USA1 - Candida albicans (Yeast)
Length = 204
Score = 46.8 bits (106), Expect = 8e-04
Identities = 24/59 (40%), Positives = 32/59 (54%)
Frame = +3
Query: 141 PNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSAT 317
P TIY L F+ G+IL I A+KTLK++GQAF+ F++I SAT
Sbjct: 4 PRQTIYVNNLNEKVSINKLKNELQQTFNVCGKILQISALKTLKLKGQAFITFEDIPSAT 62
>UniRef50_Q9ASW4 Cluster: At3g21211; n=6; Magnoliophyta|Rep:
At3g21211 - Arabidopsis thaliana (Mouse-ear cress)
Length = 339
Score = 46.4 bits (105), Expect = 0.001
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +1
Query: 553 EQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV-PNRHDIAFVEFGNXMQSAAAK 729
+ PP LF+ NL + +E L L + PGFK+++++ RH + F+EF + +
Sbjct: 228 DNPPCNTLFIGNLGENINEEELRSLLSAQPGFKQMKILRQERHTVCFIEFEDVNSATNVH 287
Query: 730 EALQGFKIP 756
LQG IP
Sbjct: 288 HNLQGAVIP 296
>UniRef50_A3LPV2 Cluster: Predicted protein; n=2; Pichia|Rep:
Predicted protein - Pichia stipitis (Yeast)
Length = 220
Score = 46.4 bits (105), Expect = 0.001
Identities = 25/53 (47%), Positives = 30/53 (56%)
Frame = +1
Query: 559 PPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQS 717
PPN+IL L NL + LS F QF GF RLV R +++FVEF N S
Sbjct: 142 PPNKILLLQNLSGSVDQTKLSSYFEQFAGFVTARLVKAR-NLSFVEFENDSAS 193
Score = 43.6 bits (98), Expect = 0.007
Identities = 23/56 (41%), Positives = 30/56 (53%)
Frame = +3
Query: 147 HTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSA 314
+TIY SL IF++FG I+ I A K LKM+GQAF+ F+ SA
Sbjct: 9 NTIYVHNLNDKVSLKKLRQSLDEIFNKFGTIIQITAHKNLKMKGQAFITFETAESA 64
>UniRef50_Q4N0S1 Cluster: Putative uncharacterized protein; n=1;
Theileria parva|Rep: Putative uncharacterized protein -
Theileria parva
Length = 288
Score = 46.0 bits (104), Expect = 0.001
Identities = 20/58 (34%), Positives = 37/58 (63%)
Frame = +1
Query: 565 NQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAAAKEAL 738
N++LF+ +LPD + ++ LF+ PGF E +L+ ++H +AF++F N S A + +
Sbjct: 202 NRVLFVEDLPDGIAHEDVNNLFHHMPGFVETKLINSKH-VAFIDFDNEFNSNYALQRI 258
>UniRef50_A2E1S1 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 100
Score = 46.0 bits (104), Expect = 0.001
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +1
Query: 565 NQILFLTNLPDETSEMMLSMLFNQFPGFKEVRL--VPNRHDIAFVEFGNXMQSAAAKEAL 738
N+ILF+ NLP L LF+++ ++RL +P+ AFV F N + + AAK+AL
Sbjct: 13 NRILFVRNLPFGIDGDKLYELFSRYGSIYQIRLGCIPSTSTTAFVVFDNVLDAQAAKDAL 72
Query: 739 QGFKI 753
G+ I
Sbjct: 73 NGYTI 77
>UniRef50_Q6CVJ3 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome B of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome B of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 114
Score = 46.0 bits (104), Expect = 0.001
Identities = 21/63 (33%), Positives = 34/63 (53%)
Frame = +3
Query: 126 TMDIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEI 305
T++I PN+T+Y SLY +F+ +G+++ + T K RGQAF+ FK +
Sbjct: 25 TIEIEPNNTVYVKNLNDQIKIQTVRESLYMLFATYGEVIKV--SMTPKQRGQAFITFKSV 82
Query: 306 SSA 314
A
Sbjct: 83 DEA 85
>UniRef50_Q4P2S8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 303
Score = 45.2 bits (102), Expect = 0.002
Identities = 18/34 (52%), Positives = 27/34 (79%)
Frame = +3
Query: 207 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEIS 308
L A+FS +G++LD+VA + MRGQAFV+F+ +S
Sbjct: 93 LLALFSTYGRVLDVVATRAPSMRGQAFVVFESVS 126
>UniRef50_Q6JB11 Cluster: MEG5; n=4; Poaceae|Rep: MEG5 - Zea mays
(Maize)
Length = 163
Score = 44.4 bits (100), Expect = 0.004
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 10/91 (10%)
Frame = +1
Query: 502 LIGHGIPGAGILNNVNAEQPPN--QILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNR 675
++G G G PP+ L++ LP + +S +F F GF+EVRLV
Sbjct: 14 VVGMDSRGMGYGGRPEPPLPPDASSTLYIEGLPANCTRREVSHIFRPFVGFREVRLVNKE 73
Query: 676 --------HDIAFVEFGNXMQSAAAKEALQG 744
H + FV+F N Q+ A EALQG
Sbjct: 74 SRHPGGDPHVLCFVDFDNPAQATIALEALQG 104
>UniRef50_Q4WUG1 Cluster: RNA binding protein; n=7;
Trichocomaceae|Rep: RNA binding protein - Aspergillus
fumigatus (Sartorya fumigata)
Length = 616
Score = 44.4 bits (100), Expect = 0.004
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +1
Query: 511 HGIPGAGILNNVNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRH-DIA 687
H +P A N N PP L++ NLP +TSE L LF++ G+K + ++ +
Sbjct: 392 HSLPAA----NPNDLNPPCNTLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNKQNGPMC 447
Query: 688 FVEFGNXMQSAAAKEALQGFKI 753
FVEF ++ A L G+K+
Sbjct: 448 FVEFDEVAMASKALNELYGYKL 469
>UniRef50_Q55ER7 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 359
Score = 44.0 bits (99), Expect = 0.005
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Frame = +1
Query: 511 HGIPGAGILNNVNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV--PNRHDI 684
HG ++++ P LF++NLP + +E LS+LF GF +RL+ + +
Sbjct: 256 HGGSALPPQSSISTTGMPCSTLFVSNLPKDVTERELSILFRFMRGFVGIRLINKEGKLPM 315
Query: 685 AFVEFGNXMQSAAAKEALQGFKI 753
F +F + S A E LQGF++
Sbjct: 316 CFCDFIDTQSSMFALEFLQGFRM 338
Score = 38.7 bits (86), Expect = 0.21
Identities = 21/65 (32%), Positives = 33/65 (50%)
Frame = +1
Query: 559 PPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAAAKEAL 738
PP+++LF+ ++P S LF PG+ +R P+ AFVEF + + A
Sbjct: 7 PPSRVLFVKDIPQRVSYDAFENLFKSLPGYLMMRRKPH---FAFVEFKDREFATMAMIKF 63
Query: 739 QGFKI 753
G+KI
Sbjct: 64 TGYKI 68
>UniRef50_Q57XJ8 Cluster: U2 small nuclear ribonucleoprotein B,
putative; n=5; Trypanosomatidae|Rep: U2 small nuclear
ribonucleoprotein B, putative - Trypanosoma brucei
Length = 117
Score = 43.6 bits (98), Expect = 0.007
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +3
Query: 141 PNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATG 320
P T+Y LY +QFG ++D++ K+ M GQAFV+F ++++AT
Sbjct: 4 PKQTLYIRGLPDKPSAEEVRRLLYLYCTQFGPVIDVLYCKSKSMYGQAFVVFTDVATATN 63
Query: 321 CFAE-HAR 341
E H R
Sbjct: 64 ARRELHER 71
>UniRef50_A5DEK8 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 141
Score = 43.6 bits (98), Expect = 0.007
Identities = 21/60 (35%), Positives = 33/60 (55%)
Frame = +3
Query: 135 IRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSA 314
IRP+ T+Y +LY +FS +G ++DI+ KMRGQA +I + ++SA
Sbjct: 21 IRPSQTLYVNNLNDQVLRRLLKHNLYLLFSTYGDVIDIIIRP--KMRGQAHIILESVTSA 78
>UniRef50_UPI00015B5425 Cluster: PREDICTED: similar to Protein couch
potato; n=2; Apocrita|Rep: PREDICTED: similar to Protein
couch potato - Nasonia vitripennis
Length = 532
Score = 43.2 bits (97), Expect = 0.010
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +1
Query: 541 NVNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRL-VPNRHDIAFVEFGNXMQS 717
++ P LF+ NL SE L +FN FPGF +R+ +AFVE+ + +
Sbjct: 394 SIAVSNAPCSTLFVANLGQFVSEHELKEIFNSFPGFCRLRMHTKGGSPVAFVEYQDVRYA 453
Query: 718 AAAKEALQG 744
A A LQG
Sbjct: 454 AQAMATLQG 462
Score = 33.5 bits (73), Expect = 7.7
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Frame = +1
Query: 535 LNNVNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRL-VPNRHD-----IAFVE 696
+N V + + LF++ LP + L +LF + G++ L V N++ + FV
Sbjct: 189 VNTVATSEDEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTNKNGKTASPVGFVT 248
Query: 697 FGNXMQSAAAKEALQGFKIPQHM 765
F ++ AAK LQG + M
Sbjct: 249 FHTRSEAEAAKHDLQGVRFDPDM 271
>UniRef50_P32605 Cluster: U1 small nuclear ribonucleoprotein A; n=2;
Saccharomyces cerevisiae|Rep: U1 small nuclear
ribonucleoprotein A - Saccharomyces cerevisiae (Baker's
yeast)
Length = 298
Score = 43.2 bits (97), Expect = 0.010
Identities = 23/62 (37%), Positives = 34/62 (54%)
Frame = +1
Query: 553 EQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAAAKE 732
E PPN++L + NLP T+E +LS + E+RLV R ++AFVE+ + K
Sbjct: 222 ENPPNKVLLIQNLPSGTTEQLLSQILGN-EALVEIRLVSVR-NLAFVEYETVADATKIKN 279
Query: 733 AL 738
L
Sbjct: 280 QL 281
>UniRef50_Q8SWG0 Cluster: Putative RNA-binding protein with some
similarity to polyadenylate- binding proteins; n=1;
Encephalitozoon cuniculi|Rep: Putative RNA-binding
protein with some similarity to polyadenylate- binding
proteins - Encephalitozoon cuniculi
Length = 246
Score = 42.7 bits (96), Expect = 0.013
Identities = 18/63 (28%), Positives = 36/63 (57%)
Frame = +1
Query: 574 LFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAAAKEALQGFKI 753
LF++N P+ SE +S++FN F K ++++ + +EF + + AA ++L G ++
Sbjct: 5 LFVSNFPESYSEESMSLIFNPFGEIKSIKILREPRLFSIIEFQEPLDAKAAMDSLGGRRV 64
Query: 754 PQH 762
H
Sbjct: 65 YGH 67
>UniRef50_Q22039 Cluster: Mec-8 protein; n=3; Caenorhabditis|Rep:
Mec-8 protein - Caenorhabditis elegans
Length = 312
Score = 42.3 bits (95), Expect = 0.017
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +1
Query: 574 LFLTNLPDETSEMMLSMLFNQFPGFKEVRLV-PNRHDIAFVEFGNXMQSAAAKEALQGFK 750
LF+ NL E +E L +F F GF +RL N +AFVE+ + ++ A +LQGF+
Sbjct: 230 LFVANLSAEVNEDTLRGVFKAFSGFTRLRLHNKNGSCVAFVEYSDLQKATQAMISLQGFQ 289
Query: 751 I 753
I
Sbjct: 290 I 290
>UniRef50_Q6CVW1 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome B of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome B of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 305
Score = 41.9 bits (94), Expect = 0.022
Identities = 23/60 (38%), Positives = 34/60 (56%)
Frame = +1
Query: 559 PPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAAAKEAL 738
PP+ +L + NLP + ++ L LF GFKEVRLV R ++ FVE+ + + E L
Sbjct: 230 PPHHVLLVQNLPKDVTQQELEKLFVS-DGFKEVRLVSVR-NLCFVEYDSTANATKVVETL 287
>UniRef50_Q6BWJ3 Cluster: Similar to sp|P09012 Homo sapiens U1 small
nuclear ribonucleoprotein A; n=1; Debaryomyces
hansenii|Rep: Similar to sp|P09012 Homo sapiens U1 small
nuclear ribonucleoprotein A - Debaryomyces hansenii
(Yeast) (Torulaspora hansenii)
Length = 116
Score = 41.9 bits (94), Expect = 0.022
Identities = 21/58 (36%), Positives = 29/58 (50%)
Frame = +3
Query: 144 NHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSAT 317
++T+Y +LY FS +G I+DIV KMRGQA +IF + AT
Sbjct: 22 SYTLYVNNLNDKIQLATLKHNLYVYFSTYGDIIDIVMKAQGKMRGQAHIIFANVMHAT 79
>UniRef50_Q6BW78 Cluster: Similar to tr|O74968 Schizosaccharomyces
pombe Small nuclear ribonucleoprotein; n=1; Debaryomyces
hansenii|Rep: Similar to tr|O74968 Schizosaccharomyces
pombe Small nuclear ribonucleoprotein - Debaryomyces
hansenii (Yeast) (Torulaspora hansenii)
Length = 252
Score = 41.9 bits (94), Expect = 0.022
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +3
Query: 126 TMDIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFK 299
T D T+Y L ++F ++G+I+ I A K LKM+GQAFV F+
Sbjct: 37 TNDAESTETVYVNNLNDKVSVNKLKGELESVFQKYGKIIQITAHKNLKMKGQAFVTFE 94
Score = 41.9 bits (94), Expect = 0.022
Identities = 25/67 (37%), Positives = 35/67 (52%)
Frame = +1
Query: 559 PPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAAAKEAL 738
PPN+IL + NL E + L F + GF RLV R +++F+EF N M + E L
Sbjct: 175 PPNKILLIQNLKPEITNGDLLEFFEAYGGFINSRLVKVR-NLSFIEFENEMSATNCLEDL 233
Query: 739 QGFKIPQ 759
K+ Q
Sbjct: 234 TKEKLEQ 240
>UniRef50_A2YPM7 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 519
Score = 41.5 bits (93), Expect = 0.029
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Frame = +1
Query: 520 PGAGILNNVNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV----PNRHDIA 687
P +G+ N AEQ LF+ LP + E +S LF+Q+ ++++++ R A
Sbjct: 112 PQSGVQGNAAAEQK----LFIGMLPRDVKENEVSALFSQYGNIRQLKVLRSPQKTRKACA 167
Query: 688 FVEFGNXMQSAAAKEALQGFKI 753
+EFG+ + AA EAL G ++
Sbjct: 168 ILEFGSKEHARAAIEALNGTRV 189
>UniRef50_P32831 Cluster: Negative growth regulatory protein NGR1;
n=2; Saccharomyces cerevisiae|Rep: Negative growth
regulatory protein NGR1 - Saccharomyces cerevisiae
(Baker's yeast)
Length = 672
Score = 41.5 bits (93), Expect = 0.029
Identities = 24/70 (34%), Positives = 36/70 (51%)
Frame = +1
Query: 538 NNVNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQS 717
N N + P N +F+ L +T+E L LF F VR +PN + FV+F + +
Sbjct: 351 NTYNTD-PTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVR-IPNGKNCGFVKFEKRIDA 408
Query: 718 AAAKEALQGF 747
A+ + LQGF
Sbjct: 409 EASIQGLQGF 418
>UniRef50_A6MD15 Cluster: RNA recognition motif family protein; n=8;
Oryza|Rep: RNA recognition motif family protein - Oryza
brachyantha
Length = 237
Score = 41.1 bits (92), Expect = 0.039
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 7/61 (11%)
Frame = +1
Query: 601 TSEMMLSMLFNQFPGFKEVRLV--PNRHD-----IAFVEFGNXMQSAAAKEALQGFKIPQ 759
TS S +F F GF+EVRLV +RH + FV+F ++ +A E LQG+K +
Sbjct: 151 TSPRDASNIFRPFSGFREVRLVNKESRHAGRYNLLCFVDFATPSEARSALETLQGYKFDE 210
Query: 760 H 762
H
Sbjct: 211 H 211
>UniRef50_A0C1D1 Cluster: Chromosome undetermined scaffold_141,
whole genome shotgun sequence; n=3;
Oligohymenophorea|Rep: Chromosome undetermined
scaffold_141, whole genome shotgun sequence - Paramecium
tetraurelia
Length = 124
Score = 41.1 bits (92), Expect = 0.039
Identities = 17/69 (24%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Frame = +1
Query: 574 LFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNR------HDIAFVEFGNXMQSAAAKEA 735
L++ +P++ E ++ +F +PGF+ VRL+ + + + FV+F + +Q+ +
Sbjct: 35 LYVDGIPNDAQEREVAHIFRPYPGFQRVRLIKKQTQKGREYLLCFVDFDDALQATIVMQT 94
Query: 736 LQGFKIPQH 762
LQG++ ++
Sbjct: 95 LQGYRFDKN 103
>UniRef50_A1A6K6 Cluster: At1g76940; n=3; rosids|Rep: At1g76940 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 233
Score = 40.7 bits (91), Expect = 0.051
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Frame = +1
Query: 547 NAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEFG 702
N + L++ LP S ++ +F F G++EVRLV ++H + FV+F
Sbjct: 129 NLPSDASNTLYVEGLPSNCSRREVAHIFRPFVGYREVRLVTKDSKHRNGDPIVLCFVDFT 188
Query: 703 NXMQSAAAKEALQGFKIPQH 762
N +A A ALQG+++ ++
Sbjct: 189 NPACAATALSALQGYRMDEN 208
>UniRef50_O74452 Cluster: Cell wall integrity protein scw1; n=1;
Schizosaccharomyces pombe|Rep: Cell wall integrity
protein scw1 - Schizosaccharomyces pombe (Fission yeast)
Length = 561
Score = 40.7 bits (91), Expect = 0.051
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Frame = +1
Query: 517 IPGAGILNNVNAEQ-PPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRL-VPNRHDIAF 690
IP + N A+Q PP +++ NLP TSE L +LF+ G+K + + F
Sbjct: 408 IPASTPTNTNPADQNPPCNTIYVGNLPPSTSEEELKVLFSTQVGYKRLCFRTKGNGPMCF 467
Query: 691 VEFGNXMQSAAAKEALQG 744
VEF N + A + LQG
Sbjct: 468 VEFENIPYAMEALKNLQG 485
>UniRef50_Q8H642 Cluster: Putative RNA-binding protein; n=2; Oryza
sativa|Rep: Putative RNA-binding protein - Oryza sativa
subsp. japonica (Rice)
Length = 293
Score = 40.3 bits (90), Expect = 0.067
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 8/54 (14%)
Frame = +1
Query: 625 LFNQFPGFKEVRLVPN--RHD------IAFVEFGNXMQSAAAKEALQGFKIPQH 762
+F F GF+EVRLV RH + FV+F Q+A A +ALQG+K +H
Sbjct: 210 IFRPFVGFREVRLVSKEARHPGGDPILLCFVDFETASQAAIAMDALQGYKFDEH 263
>UniRef50_Q755N7 Cluster: AFL224Wp; n=1; Eremothecium gossypii|Rep:
AFL224Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 206
Score = 40.3 bits (90), Expect = 0.067
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Frame = +1
Query: 571 ILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNR-----HDIAFVEFGNXMQSAAAKEA 735
I++++ LP E LS F QF K+VRL N+ AF+EF N + A+E
Sbjct: 79 IIYISRLPHGFHERELSTYFAQFGDLKQVRLARNKKTGNSRHYAFIEFANPDDAVVAQET 138
Query: 736 LQGFKIPQHM 765
+ + + H+
Sbjct: 139 MHNYLLMGHL 148
>UniRef50_Q6C1Y4 Cluster: Similarities with sp|P34761 Saccharomyces
cerevisiae YNL197c; n=1; Yarrowia lipolytica|Rep:
Similarities with sp|P34761 Saccharomyces cerevisiae
YNL197c - Yarrowia lipolytica (Candida lipolytica)
Length = 625
Score = 38.7 bits (86), Expect = 0.21
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +1
Query: 553 EQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRH-DIAFVEFGNXMQSAAAK 729
+ PP L++ NLP T+E L LF++ G+K + + + FVEF N M ++ A
Sbjct: 509 QNPPCNTLYVGNLPMNTTEEELMQLFSKQKGYKRLCFRTKMNGPMCFVEFENVMYASKAL 568
Query: 730 EALQG 744
L G
Sbjct: 569 NELYG 573
>UniRef50_Q6ID24 Cluster: At4g12630; n=6; Arabidopsis thaliana|Rep:
At4g12630 - Arabidopsis thaliana (Mouse-ear cress)
Length = 117
Score = 38.3 bits (85), Expect = 0.27
Identities = 23/65 (35%), Positives = 35/65 (53%)
Frame = +1
Query: 559 PPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAAAKEAL 738
PP++ L++ NLP E L+ F +F + + P R AFV F + + AA E+L
Sbjct: 20 PPSRHLWVGNLPHGILERELADRFLRFGELESLAFQPGR-SYAFVNFNHDEDAFAAIESL 78
Query: 739 QGFKI 753
QGF +
Sbjct: 79 QGFPL 83
>UniRef50_Q6FT44 Cluster: Candida glabrata strain CBS138 chromosome
G complete sequence; n=1; Candida glabrata|Rep: Candida
glabrata strain CBS138 chromosome G complete sequence -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 674
Score = 38.3 bits (85), Expect = 0.27
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Frame = +1
Query: 553 EQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV---PNRH-----DIAFVEFGNX 708
+ PP L++ NLP +TSE L LF+ PGF+ + N H + FVEF +
Sbjct: 553 QNPPCNTLYVGNLPPDTSEQELRQLFSPQPGFRRLSFKNKNNNGHTHGHGPMCFVEFEDV 612
Query: 709 MQSAAAKEALQGFKIPQ 759
+ A L G ++P+
Sbjct: 613 SFATRALAELYGRQLPR 629
>UniRef50_Q80XZ1 Cluster: SMPTB; n=2; Murinae|Rep: SMPTB - Rattus
norvegicus (Rat)
Length = 588
Score = 37.9 bits (84), Expect = 0.36
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +1
Query: 559 PPNQILFLTNLPDETSEMMLSMLFNQFP-GFKEVRLVPNRHDIAFVEFGNXMQSAAAKEA 735
PP+ L L+NLP SE L LF+ K R P H +A + G+ ++ A
Sbjct: 508 PPSATLHLSNLPSLVSEEELKNLFSSNGYAVKAFRFFPKNHKMALIRMGSTEEAIQALVD 567
Query: 736 LQGFKIPQHMQ*RLLLLRNSV 798
L G + Q+ R+ R ++
Sbjct: 568 LHGHLLGQNHHMRVSFSRMTI 588
>UniRef50_A4V6N1 Cluster: HnRNP A2/B1 protein; n=1; Dugesia
japonica|Rep: HnRNP A2/B1 protein - Dugesia japonica
(Planarian)
Length = 386
Score = 37.9 bits (84), Expect = 0.36
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = +3
Query: 219 FSQFGQILDIVAMKTL---KMRGQAFVIFKEISSATGCFAE 332
FS++G + D+VAM+ K RG FV+FKE S C AE
Sbjct: 38 FSKYGDVCDVVAMRDKTGNKSRGFGFVVFKEAESVDRCQAE 78
>UniRef50_Q66IT0 Cluster: MGC84815 protein; n=1; Xenopus laevis|Rep:
MGC84815 protein - Xenopus laevis (African clawed frog)
Length = 291
Score = 37.5 bits (83), Expect = 0.47
Identities = 21/39 (53%), Positives = 26/39 (66%), Gaps = 3/39 (7%)
Frame = +3
Query: 204 SLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISS 311
SL A +SQ+G+I D+V MK + K RG FV FKE SS
Sbjct: 28 SLRAYYSQWGEITDVVVMKDPRSNKSRGFGFVTFKEASS 66
>UniRef50_A2GDE6 Cluster: Putative uncharacterized protein; n=4;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 364
Score = 37.5 bits (83), Expect = 0.47
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +1
Query: 538 NNVNAEQPPNQILFLTNL-PDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQ 714
N N+ N LF+TN+ PD E L F+Q+ V++ PN A V
Sbjct: 184 NENNSLDVKNTTLFITNIDPDVVKEETLLQNFHQYGNVLSVKIDPNNQSWATVVMETHTS 243
Query: 715 SAAAKEALQG 744
+ +AK AL G
Sbjct: 244 AESAKNALSG 253
>UniRef50_Q6E6F7 Cluster: U1 small ribonucleoprotein; n=1;
Antonospora locustae|Rep: U1 small ribonucleoprotein -
Antonospora locustae (Nosema locustae)
Length = 175
Score = 37.5 bits (83), Expect = 0.47
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +3
Query: 129 MDIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEIS 308
M+ RP T+Y L + S++ ++D+ T+++RGQAFV FK
Sbjct: 1 MNNRPCRTLYFQNLNEKMNKSELARRLKMLVSRYAYVVDVTIWNTMRLRGQAFVTFKTTD 60
Query: 309 SA 314
A
Sbjct: 61 DA 62
>UniRef50_A7TIB5 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 683
Score = 37.5 bits (83), Expect = 0.47
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Frame = +1
Query: 553 EQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEV-----RLVPNRH-DIAFVEFGNXMQ 714
+ PP L++ NLP + +E L LF+ PGF+ + N H I FVEF +
Sbjct: 557 QNPPCNTLYVGNLPSDATEHELRQLFSSQPGFRRLSFRNKNTNGNGHGPICFVEFEDVSF 616
Query: 715 SAAAKEALQGFKIP 756
+ A L G ++P
Sbjct: 617 ATRALAELYGSQLP 630
>UniRef50_A6QTM8 Cluster: Predicted protein; n=2; Onygenales|Rep:
Predicted protein - Ajellomyces capsulatus NAm1
Length = 408
Score = 37.5 bits (83), Expect = 0.47
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +1
Query: 553 EQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRH-DIAFVEFGNXMQSAAAK 729
+ PP L++ NLP +TSE L LF + G+K + ++ + FVEF + + A
Sbjct: 205 QNPPCNTLYVGNLPHDTSEDELKALFTKQRGYKRLCFRNKQNGPMCFVEFEDISFATKAL 264
Query: 730 EALQGFKI 753
L G+++
Sbjct: 265 HELYGYQL 272
>UniRef50_Q75EQ7 Cluster: AAR022Wp; n=2; Saccharomycetaceae|Rep:
AAR022Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 114
Score = 37.1 bits (82), Expect = 0.63
Identities = 21/58 (36%), Positives = 29/58 (50%)
Frame = +3
Query: 141 PNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSA 314
P T+Y +LY +FS FG++L I AM K+RGQAFV+ + A
Sbjct: 30 PRSTLYISNLNDQVKISTLRTNLYLLFSTFGEVLRI-AMSP-KLRGQAFVVLSTVDEA 85
>UniRef50_Q6FLF5 Cluster: Similar to sp|P53927 Saccharomyces
cerevisiae YNL110c; n=1; Candida glabrata|Rep: Similar
to sp|P53927 Saccharomyces cerevisiae YNL110c - Candida
glabrata (Yeast) (Torulopsis glabrata)
Length = 255
Score = 37.1 bits (82), Expect = 0.63
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Frame = +1
Query: 571 ILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNR-----HDIAFVEFGNXMQSAAAKEA 735
I+++ LP E LS F+QF KEVRL N+ FV+F N S A +
Sbjct: 126 IIYVGRLPKGFHERELSKYFSQFGDLKEVRLARNKKTGNSRHYGFVQFVNTDDSRVAYDT 185
Query: 736 LQGFKIPQH-MQ*RLL 780
+ + + H +Q RLL
Sbjct: 186 MNNYLLMGHLLQVRLL 201
>UniRef50_UPI0000499255 Cluster: RNA-binding protein; n=3; Entamoeba
histolytica HM-1:IMSS|Rep: RNA-binding protein -
Entamoeba histolytica HM-1:IMSS
Length = 358
Score = 36.7 bits (81), Expect = 0.83
Identities = 21/75 (28%), Positives = 39/75 (52%)
Frame = +1
Query: 529 GILNNVNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNX 708
GI ++N E P + L + N+ +T + L +F+++ KE+R P+R F+E+ +
Sbjct: 108 GIPIDIN-EGPNHGTLVIFNIDKQTDDETLKTIFSKYGEIKEIRETPSRKYHKFIEYFDS 166
Query: 709 MQSAAAKEALQGFKI 753
S A + L +I
Sbjct: 167 RSSDVALKELNDIEI 181
>UniRef50_Q01B63 Cluster: RNA recognition motif; n=2;
Ostreococcus|Rep: RNA recognition motif - Ostreococcus
tauri
Length = 907
Score = 36.7 bits (81), Expect = 0.83
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Frame = +1
Query: 574 LFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHD-----IAFVEFGNXMQSAAAKEAL 738
L + N+ E ++ + LFN F K+VRL P + D AFVEF ++ AA +AL
Sbjct: 802 LVIRNVAFEATKRDIQKLFNPFGQLKQVRL-PKKFDGAHRGFAFVEFNTARETQAAMDAL 860
Query: 739 QG 744
+G
Sbjct: 861 KG 862
>UniRef50_Q6MVP3 Cluster: Related to heterogeneous nuclear
ribonucleoprotein HRP1; n=3; Neurospora crassa|Rep:
Related to heterogeneous nuclear ribonucleoprotein HRP1
- Neurospora crassa
Length = 344
Score = 36.7 bits (81), Expect = 0.83
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Frame = +1
Query: 520 PGAGILNNVNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNR-----HDI 684
P +N +A P+ LF+ N+P ET++ L+ +F G K+VR+ +R
Sbjct: 162 PRRAKVNRGSAVGEPSACLFIGNIPYETTDAELNNIFVGIDGLKDVRVAVDRATGWPRGF 221
Query: 685 AFVEFGNXMQSAAAKEALQGFKI 753
A +F + + A E LQG ++
Sbjct: 222 AHADFVDVEAAVNALEKLQGTQL 244
>UniRef50_A3LPR6 Cluster: Predicted protein; n=3;
Saccharomycetales|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 124
Score = 36.7 bits (81), Expect = 0.83
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +3
Query: 132 DIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISS 311
+++P+ T+Y +LY +FS +G I+DI K RGQA +IF ++
Sbjct: 27 NLKPSQTLYIKNLNDKINPKIIKHNLYLLFSTYGDIIDIKNNK----RGQAHIIFTNVAG 82
Query: 312 AT 317
A+
Sbjct: 83 AS 84
>UniRef50_A0DLY6 Cluster: Chromosome undetermined scaffold_56, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_56,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 487
Score = 36.3 bits (80), Expect = 1.1
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +3
Query: 204 SLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATGCFAEHARI 344
SL +FSQFG IL + K+ K+ G A++ F + SA C AE +++
Sbjct: 101 SLRQLFSQFGTILSVKLQKSDKV-GVAYIQFDKKESADKCIAEQSKL 146
>UniRef50_Q75BH4 Cluster: ADL371Cp; n=1; Eremothecium gossypii|Rep:
ADL371Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 284
Score = 36.3 bits (80), Expect = 1.1
Identities = 21/63 (33%), Positives = 34/63 (53%)
Frame = +1
Query: 550 AEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAAAK 729
A PPN++L + +LP + +E L +F +VRLV R +AFV++ + + A K
Sbjct: 207 ANNPPNKVLLVQDLPTDITEQELVDIFAN-DKLLQVRLVQVR-QLAFVDYADVQSATAVK 264
Query: 730 EAL 738
L
Sbjct: 265 NKL 267
>UniRef50_Q6CEQ5 Cluster: Similarities with tr|Q8ITY4 Caenorhabditis
elegans Putative uncharacterized protein; n=1; Yarrowia
lipolytica|Rep: Similarities with tr|Q8ITY4
Caenorhabditis elegans Putative uncharacterized protein
- Yarrowia lipolytica (Candida lipolytica)
Length = 113
Score = 36.3 bits (80), Expect = 1.1
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +1
Query: 562 PNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNR--HDIAFVEFGNXMQSAAAKEA 735
PN ILF+ NLP E++ L LF +F +++R + AFV + + + A +
Sbjct: 9 PNNILFVKNLPYESTSDELYELFGRFGAVRQIRAGSEKDTRGTAFVVYEDIDDATEAVKT 68
Query: 736 LQGF 747
L GF
Sbjct: 69 LSGF 72
Score = 33.9 bits (74), Expect = 5.9
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 207 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSAT 317
LY +F +FG + I A RG AFV++++I AT
Sbjct: 27 LYELFGRFGAVRQIRAGSEKDTRGTAFVVYEDIDDAT 63
>UniRef50_Q9NQ94 Cluster: APOBEC1 complementation factor; n=41;
Eumetazoa|Rep: APOBEC1 complementation factor - Homo
sapiens (Human)
Length = 594
Score = 36.3 bits (80), Expect = 1.1
Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Frame = +1
Query: 499 RLIGHGIPGAGILNNVNAEQPPN---QILFLTNLPDETSEMMLSMLFNQF-PGFKEVRLV 666
+L GHGI V ++ +IL++ NL TSE M+ FN PG V V
Sbjct: 205 QLWGHGIAVDWAEPEVEVDEDTMSSVKILYVRNLMLSTSEEMIEKEFNNIKPG--AVERV 262
Query: 667 PNRHDIAFVEFGNXMQSAAAKEALQG 744
D AFV F N + A +AL G
Sbjct: 263 KKIRDYAFVHFSNREDAVEAMKALNG 288
>UniRef50_A2FJ46 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 186
Score = 28.3 bits (60), Expect(2) = 1.1
Identities = 11/46 (23%), Positives = 25/46 (54%)
Frame = +1
Query: 553 EQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAF 690
E+P + ++ L P + S + +L ++ PGF E++ + + + F
Sbjct: 111 EEPESTVIKLWGFPPKISIQVPKLLVSKLPGFHEIQQIDDAFLVTF 156
Score = 27.1 bits (57), Expect(2) = 1.1
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +1
Query: 319 VALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTFQER 432
+ ++ FPF K ++I+YSK S + + F R
Sbjct: 65 IIMKQFNNFPFLGKALQIEYSKNPSKSLEEFYNAFSTR 102
>UniRef50_A2XN97 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 199
Score = 35.9 bits (79), Expect = 1.4
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Frame = +1
Query: 535 LNNVNAEQPP--NQILFLTNLPDETSEMMLSMLFNQFPGFKEVRL--VPNRHDIAFVEFG 702
L NA PP N++L++ NLP S + +F ++ +++RL + AFV +
Sbjct: 6 LRKSNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRLGNAKDTRGTAFVVYE 65
Query: 703 NXMQSAAAKEALQGFKI 753
+ + A + L GF +
Sbjct: 66 DIYDAKNAVDHLSGFNV 82
>UniRef50_Q5CRM8 Cluster: T8M16_190-plant like protein with RRM
domain; n=2; Cryptosporidium|Rep: T8M16_190-plant like
protein with RRM domain - Cryptosporidium parvum Iowa II
Length = 600
Score = 35.9 bits (79), Expect = 1.4
Identities = 20/38 (52%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +3
Query: 204 SLYAIFSQFGQILD-IVAMKTLKMRGQAFVIFKEISSA 314
S+ +FSQFG + + IV K K RG AFV FK I SA
Sbjct: 112 SVIEVFSQFGDVEEGIVLKKDGKSRGYAFVTFKTIESA 149
>UniRef50_Q1JSB7 Cluster: RNA binding protein, putative; n=1;
Toxoplasma gondii|Rep: RNA binding protein, putative -
Toxoplasma gondii
Length = 475
Score = 35.9 bits (79), Expect = 1.4
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Frame = +1
Query: 508 GHGIPGAGILNNVNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNR---- 675
G G AG + NAE PP +F+ ++P+E + L F F R+ +R
Sbjct: 325 GAGGMAAGSGQSSNAEGPPGANIFVFHVPNEWTYYDLMQNFGGFGNVVSARVATDRTTGR 384
Query: 676 -HDIAFVEFGNXMQSAAAKEALQGF 747
AFV + N +A A + GF
Sbjct: 385 NRGFAFVSYDNVESAATAVNNMNGF 409
>UniRef50_Q2H622 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 361
Score = 35.9 bits (79), Expect = 1.4
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Frame = +1
Query: 547 NAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNR-----HDIAFVEFGNXM 711
N+ P LF+ N+P ET++ L+ +F K+VR+ +R A +F +
Sbjct: 224 NSPSEPTAQLFIGNIPYETTDAELNRIFQGMGNVKDVRVAVDRTTGWPRGFAHADFPSVE 283
Query: 712 QSAAAKEALQGFKI 753
+ AK+ L+G K+
Sbjct: 284 AAIDAKQRLEGAKL 297
>UniRef50_A7RXA3 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 470
Score = 35.5 bits (78), Expect = 1.9
Identities = 18/79 (22%), Positives = 37/79 (46%)
Frame = +1
Query: 559 PPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAAAKEAL 738
PP++ L L+N+P+ +E L+ +F + R +P +A + ++ A +
Sbjct: 391 PPSRTLHLSNIPESVTEEELTSMFEDCGDVADFRFLPKDRKMAHLSMATTEEAIDALIKM 450
Query: 739 QGFKIPQHMQ*RLLLLRNS 795
+KI + R+ R+S
Sbjct: 451 HNYKISETHHLRVSFARSS 469
>UniRef50_Q0UEV7 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 572
Score = 35.5 bits (78), Expect = 1.9
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +1
Query: 553 EQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRH-DIAFVEFGNXMQSAAAK 729
+ PP L++ NLP +TSE L +F++ G+K + ++ + FVEF + + A
Sbjct: 384 QNPPCNTLYVGNLPMDTSEDELKAVFSKQRGYKRLCFRTKQNGPMCFVEFEDTSFATKAL 443
Query: 730 EALQGFKI 753
L G+ +
Sbjct: 444 NELYGYML 451
>UniRef50_Q58T22 Cluster: FPA; n=6; Arabidopsis thaliana|Rep: FPA -
Arabidopsis thaliana (Mouse-ear cress)
Length = 1056
Score = 35.1 bits (77), Expect = 2.5
Identities = 19/57 (33%), Positives = 34/57 (59%)
Frame = +1
Query: 574 LFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAAAKEALQG 744
L++ +L ET+E L+ LF ++ + + +R AF+ + + ++ AAKEALQG
Sbjct: 20 LWVGSLTPETTESDLTELFGRYGDIDRITVYSSR-GFAFIYYRHVEEAVAAKEALQG 75
>UniRef50_Q4N6Y8 Cluster: RNA-binding protein, putative; n=2;
Theileria|Rep: RNA-binding protein, putative - Theileria
parva
Length = 195
Score = 35.1 bits (77), Expect = 2.5
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Frame = +1
Query: 544 VNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNR-----HDIAFVEFGNX 708
V+ ++ N ++++ NLP + +E L FNQF ++RL +R AFV+F +
Sbjct: 5 VSFKKNKNNVIYVGNLPKQLTEEQLKTYFNQFGDVIKIRLFKSRKTNRSRGYAFVQFEDH 64
Query: 709 MQSAAAKEALQGFKI 753
+ A E + + I
Sbjct: 65 EIAKIAAETMDKYLI 79
>UniRef50_A2DSN3 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 280
Score = 35.1 bits (77), Expect = 2.5
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Frame = +1
Query: 535 LNNVNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNR-----HDIAFVEF 699
++N ++++ + LF+ NLP E E + +F + +V R IAFVEF
Sbjct: 1 MSNYDSDKSEKKTLFIANLPIEALEKHVREVFEPYGTILTAFIVNTRGTVRSRGIAFVEF 60
Query: 700 GNXMQSAAAKEALQGFK 750
Q+ AA A G K
Sbjct: 61 EKHEQAEAAMAATNGMK 77
>UniRef50_Q6CJ74 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 616
Score = 35.1 bits (77), Expect = 2.5
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Frame = +1
Query: 553 EQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHD------IAFVEFGNXMQ 714
+ PP L++ NLP + +E L LF GFK + ++ + FVEF +
Sbjct: 444 QNPPCNTLYVGNLPPDATEQELRQLFGGQKGFKRLSFRNKNNNNSGHGPMCFVEFEDVAH 503
Query: 715 SAAAKEALQGFKIPQ 759
+ A L G ++P+
Sbjct: 504 ATRALAELYGSQLPR 518
>UniRef50_P19338 Cluster: Nucleolin; n=39; Deuterostomia|Rep:
Nucleolin - Homo sapiens (Human)
Length = 710
Score = 35.1 bits (77), Expect = 2.5
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Frame = +1
Query: 547 NAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHD-----IAFVEFGNXM 711
NA P++ LF+ L ++T+E L F G R+V +R FV+F +
Sbjct: 565 NARSQPSKTLFVKGLSEDTTEETLK---ESFDGSVRARIVTDRETGSSKGFGFVDFNSEE 621
Query: 712 QSAAAKEALQGFKI 753
+ AAKEA++ +I
Sbjct: 622 DAKAAKEAMEDGEI 635
>UniRef50_Q6FIQ5 Cluster: Candida glabrata strain CBS138 chromosome
M complete sequence; n=1; Candida glabrata|Rep: Candida
glabrata strain CBS138 chromosome M complete sequence -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 299
Score = 34.7 bits (76), Expect = 3.3
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Frame = +3
Query: 207 LYAIFSQFGQILDI--VAMKTLKMRGQAFVIFKEISSATGC 323
L +F+++G+I+ + V K K RG AFV+FKE SA C
Sbjct: 131 LQKVFAKYGEIVRVRVVRDKQNKSRGYAFVLFKETDSARVC 171
>UniRef50_Q2H528 Cluster: Putative uncharacterized protein; n=5;
Pezizomycotina|Rep: Putative uncharacterized protein -
Chaetomium globosum (Soil fungus)
Length = 650
Score = 34.7 bits (76), Expect = 3.3
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +1
Query: 553 EQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRH-DIAFVEFGNXMQSAAAK 729
+ PP L++ NLP +TSE L LF++ G+K + ++ + FVEF + + A
Sbjct: 460 QNPPCNTLYVGNLPLDTSEEELKALFSRQRGYKRLCFRTKQNGPMCFVEFEDVTFATKAL 519
Query: 730 EALQG 744
L G
Sbjct: 520 HDLYG 524
>UniRef50_A6R5B5 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 675
Score = 34.7 bits (76), Expect = 3.3
Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 11/82 (13%)
Frame = +1
Query: 550 AEQP-PNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV----PNRHD------IAFVE 696
AE P LF+ NL T+ L+ +F GF R+ P R FVE
Sbjct: 438 AETPLETSTLFVRNLNFSTTNARLTEVFQPLDGFLSARVKTKADPKRPGETLSMGFGFVE 497
Query: 697 FGNXMQSAAAKEALQGFKIPQH 762
F Q+ AA +QG+K+ QH
Sbjct: 498 FRTAAQARAALATMQGYKLDQH 519
>UniRef50_UPI00003645BC Cluster: Homolog of Cyprinus carpio
"Nucleolin.; n=1; Takifugu rubripes|Rep: Homolog of
Cyprinus carpio "Nucleolin. - Takifugu rubripes
Length = 455
Score = 34.3 bits (75), Expect = 4.4
Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 2/83 (2%)
Frame = +1
Query: 511 HGIPGAGILNNVNAEQP--PNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDI 684
+G G A+ P PN LF++NLP E L +F + + +
Sbjct: 274 NGSKGTETKGEKKAKAPVSPNNTLFVSNLPYRVKEATLKTVFKKAVSIALPEVNGKKTGF 333
Query: 685 AFVEFGNXMQSAAAKEALQGFKI 753
AF+EF + A E+ Q K+
Sbjct: 334 AFIEFATVADAQKALESAQNKKL 356
>UniRef50_Q0IYS7 Cluster: Os10g0167500 protein; n=4; Oryza
sativa|Rep: Os10g0167500 protein - Oryza sativa subsp.
japonica (Rice)
Length = 703
Score = 34.3 bits (75), Expect = 4.4
Identities = 20/59 (33%), Positives = 33/59 (55%)
Frame = +1
Query: 574 LFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAAAKEALQGFK 750
LF+ LP + E + ++F+Q + +R+V R IAFV + + +A K+AL FK
Sbjct: 256 LFVGGLPKDCVEEDIRVVFSQCGEVESIRIVKKRKRIAFVRYADI---SATKKALTEFK 311
>UniRef50_A7PLE9 Cluster: Chromosome chr7 scaffold_20, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr7 scaffold_20, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 336
Score = 34.3 bits (75), Expect = 4.4
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = +1
Query: 574 LFLTNLPDETSEMMLSMLFNQFPGFKEVRL---VPNRHDIAFVEFGNXMQSAAAKEALQG 744
LF+ LP++ + LF +FPG++ L N AF F + + AA AL G
Sbjct: 83 LFIAGLPEDVKPREIYNLFREFPGYESSHLRSPSQNSQPFAFAVFLDQQSAIAAMHALNG 142
>UniRef50_Q59G98 Cluster: TIA1 protein variant; n=5;
Euteleostomi|Rep: TIA1 protein variant - Homo sapiens
(Human)
Length = 464
Score = 34.3 bits (75), Expect = 4.4
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Frame = +1
Query: 520 PGAGILNNVNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV---PNRHDIAF 690
PG E + L++ NL + +E ++ LF+Q K +++ F
Sbjct: 29 PGGAAATAAAMEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCF 88
Query: 691 VEFGNXMQSAAAKEALQGFKI 753
VEF +AAA A+ G KI
Sbjct: 89 VEFHEHRHAAAALAAMNGRKI 109
>UniRef50_Q4P4X8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 1001
Score = 34.3 bits (75), Expect = 4.4
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 8/80 (10%)
Frame = +1
Query: 538 NNVNAEQPPNQILFLTNLPDETSEMMLSML-------FNQFPGFKEVRL-VPNRHDIAFV 693
N V PP LF+ NLP S +LS + F+ GF++ + + + FV
Sbjct: 843 NVVGDNHPPVNTLFVGNLPSNASSAVLSQIEDQLRAVFSSCRGFRQFSFRLKSNGPMCFV 902
Query: 694 EFGNXMQSAAAKEALQGFKI 753
EFG+ ++ A L G +
Sbjct: 903 EFGDVHTASQAMSELNGHSL 922
>UniRef50_A7TRU0 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 600
Score = 34.3 bits (75), Expect = 4.4
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Frame = +1
Query: 553 EQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRL-----VPNRH-DIAFVEFGNXMQ 714
+ PP L++ NLP + +E L LF+ GF+ + N H + FVEF +
Sbjct: 454 QNPPCNTLYVGNLPPDATEQELRQLFSSQQGFRRLSFRNKNSNGNGHGPMCFVEFEDASF 513
Query: 715 SAAAKEALQGFKIPQ 759
+ A L G ++P+
Sbjct: 514 ATVALAELYGSQLPR 528
>UniRef50_Q7VEF1 Cluster: Glycosyltransferase of PMT family; n=1;
Prochlorococcus marinus|Rep: Glycosyltransferase of PMT
family - Prochlorococcus marinus
Length = 779
Score = 33.9 bits (74), Expect = 5.9
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 6/110 (5%)
Frame = -3
Query: 486 VFLFLPIIST-FR*LWTF--RSFLKCSFTFCYYITINF*ILNSHWFIIEWKSL--HAPQS 322
+FL LPII T F+ ++F R+F+ +F +I+ F + S WF I W ++ ++
Sbjct: 174 IFLILPIIITLFKAFFSFFNRNFIPLINSFIVFISFIF--IFSPWFSINWLTILTSLNRA 231
Query: 321 NQWHLKFP*K*QMLGHAFLRFSLLLYP-IFDQIVKILHKVTSLILLF*SF 175
QW + + Q A LL YP + +++ + + +ILL SF
Sbjct: 232 RQWGISY----QEGLEANTLEGLLFYPLLLPKMIGVCFITSIIILLIFSF 277
>UniRef50_Q0WQM7 Cluster: Putative RNA-binding protein; n=7; core
eudicotyledons|Rep: Putative RNA-binding protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 302
Score = 33.9 bits (74), Expect = 5.9
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = +1
Query: 574 LFLTNLPDETSEMMLSMLFNQFPGFK--EVRLVPNRHDIAFVEFGNXMQSAAAKEALQG- 744
LF+ LP++ + LF +FPG++ +R AF F + + A AL G
Sbjct: 52 LFVAGLPEDVKPREIYNLFREFPGYETSHLRSSDGAKPFAFAVFSDLQSAVAVMHALNGM 111
Query: 745 -FKIPQH 762
F + +H
Sbjct: 112 VFDLEKH 118
>UniRef50_A7QYR4 Cluster: Chromosome chr5 scaffold_253, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_253, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 888
Score = 33.9 bits (74), Expect = 5.9
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +1
Query: 553 EQPPNQILFLTNLPD-ETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAAAK 729
E P+ +L++ P + E ML F + ++ P+RH +FVEF + ++ AK
Sbjct: 213 EGQPSNVLWVGYPPSIQLEEQMLYNAMILFGEIERIKSFPSRH-YSFVEFRSIDEARRAK 271
Query: 730 EALQG 744
E LQG
Sbjct: 272 EGLQG 276
>UniRef50_Q54C48 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 691
Score = 33.9 bits (74), Expect = 5.9
Identities = 17/61 (27%), Positives = 35/61 (57%)
Frame = +1
Query: 562 PNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAAAKEALQ 741
P +I++ N+ E++E + LF+QF + ++++PN+ AF+ F + + A+ L
Sbjct: 175 PTKIVWAGNINPESTEEEVRHLFSQFGYLQAIKIIPNK-QCAFITFADVNCAIQAQFNLN 233
Query: 742 G 744
G
Sbjct: 234 G 234
>UniRef50_A0E3I2 Cluster: Chromosome undetermined scaffold_76, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_76,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 615
Score = 33.9 bits (74), Expect = 5.9
Identities = 14/61 (22%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Frame = +1
Query: 574 LFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDI--AFVEFGNXMQSAAAKEALQGF 747
LF++ + E+ + +F+QF + + L PN+H+I ++++F Q+ +A + +
Sbjct: 155 LFVSGISKNYDELKIRQIFSQFGSIERIDLYPNKHNIFNSYIKFFTIDQAISAYQKMDSI 214
Query: 748 K 750
+
Sbjct: 215 Q 215
>UniRef50_A6SJV1 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 518
Score = 33.9 bits (74), Expect = 5.9
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Frame = +1
Query: 547 NAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRL-----VPNRHDIAFVEFGNXM 711
+A+ PP+ LFL NL + E ++ F + VRL N +V FG+
Sbjct: 363 DAKNPPSDTLFLGNLSFDADENVVGEAFGEHGTVVNVRLPTDQETGNPKGFGYVTFGSVE 422
Query: 712 QSAAAKEALQGFKI 753
+ AA +A+ G I
Sbjct: 423 DATAAYDAMMGADI 436
>UniRef50_P34761 Cluster: Protein WHI3; n=2; Saccharomyces
cerevisiae|Rep: Protein WHI3 - Saccharomyces cerevisiae
(Baker's yeast)
Length = 661
Score = 33.9 bits (74), Expect = 5.9
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Frame = +1
Query: 553 EQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEV-----RLVPNRHD---IAFVEFGNX 708
+ PP L++ NLP + +E L LF+ GF+ + N H + FVEF +
Sbjct: 533 QNPPCNTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDV 592
Query: 709 MQSAAAKEALQGFKIPQ 759
+ A L G ++P+
Sbjct: 593 SFATRALAELYGRQLPR 609
>UniRef50_Q7XAN8 Cluster: Putative CUG triplet repeat RNA-binding
protein 1; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative CUG triplet repeat
RNA-binding protein 1 - Oryza sativa subsp. japonica
(Rice)
Length = 427
Score = 33.5 bits (73), Expect = 7.7
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
Frame = +1
Query: 568 QILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV--PNR----HDIAFVEFGNXMQSAAAK 729
Q LF+ LP + E +S LF+Q+ ++++++ P + A +EFG+ + AA
Sbjct: 102 QKLFIGMLPRDVKENEVSALFSQYGNIRQLKVLRSPQKTRKAAACAILEFGSKEHARAAI 161
Query: 730 EALQGFKI 753
EAL G ++
Sbjct: 162 EALNGTRV 169
>UniRef50_Q5DAB2 Cluster: SJCHGC09413 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09413 protein - Schistosoma
japonicum (Blood fluke)
Length = 214
Score = 33.5 bits (73), Expect = 7.7
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +1
Query: 574 LFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAAAKEALQG 744
+++ +LP E SE L +F ++ + V + N AFVEF + ++ A L G
Sbjct: 12 VYIGDLPREASERELERIFREYGRLRNVWVARNPPGFAFVEFEDAADASDAVRELDG 68
>UniRef50_A5DZH8 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 234
Score = 33.5 bits (73), Expect = 7.7
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = +3
Query: 129 MDIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEIS 308
M P TIY +L + + +I+ KTL+++GQAF+ F++++
Sbjct: 1 MSSEPKRTIYLNNLNDKVSINKLRSNLATLLQPYNPT-NIIVAKTLRLKGQAFITFQDVT 59
Query: 309 SA 314
+A
Sbjct: 60 NA 61
>UniRef50_Q6L1U3 Cluster: Putative uncharacterized protein; n=1;
Picrophilus torridus|Rep: Putative uncharacterized
protein - Picrophilus torridus
Length = 269
Score = 33.5 bits (73), Expect = 7.7
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -2
Query: 910 FLNYHIISQPDQRAFXRGMLKTVLSFSIIILK--ITCFTLHYFLAKVIFIACV 758
F+N HI+S P + G K V + SI I+ +T++Y +A V +A +
Sbjct: 208 FVNIHIVSDPSYKLIVPGDAKAVNANSIEIINNHTVSYTMYYIIAAVAVVAAI 260
>UniRef50_Q44560 Cluster: Putative RNA-binding protein rbpA; n=4;
Bacteria|Rep: Putative RNA-binding protein rbpA -
Anabaena sp. (strain PCC 7120)
Length = 102
Score = 33.5 bits (73), Expect = 7.7
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Frame = +1
Query: 574 LFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHD-----IAFVEFGNXMQSAAAKEAL 738
+++ NL E ++ LS +F ++ K V+L +R FVE G+ + AAA EAL
Sbjct: 3 IYVGNLSYEVTQDTLSAVFAEYGTVKRVQLPTDRETGQPRGFGFVEMGSEAEEAAAIEAL 62
Query: 739 QG 744
G
Sbjct: 63 DG 64
>UniRef50_P40567 Cluster: U2 small nuclear ribonucleoprotein B'';
n=2; Saccharomyces cerevisiae|Rep: U2 small nuclear
ribonucleoprotein B'' - Saccharomyces cerevisiae
(Baker's yeast)
Length = 111
Score = 33.5 bits (73), Expect = 7.7
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +3
Query: 204 SLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSAT 317
+L+ +F+ FG++L V+M K RGQAF+ + I A+
Sbjct: 47 NLFLLFATFGEVLK-VSMNFKKQRGQAFITMRTIDQAS 83
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 798,958,157
Number of Sequences: 1657284
Number of extensions: 15076416
Number of successful extensions: 33300
Number of sequences better than 10.0: 120
Number of HSP's better than 10.0 without gapping: 32004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33254
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 84031265255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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