Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_C04
(917 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0398 + 3142934-3143110,3143697-3143930,3144180-3144353,314... 119 4e-27
03_02_0694 - 10448712-10448996,10449030-10449074,10449588-104496... 85 1e-16
08_01_0925 + 9117217-9117576,9117674-9117749,9118460-9118592,911... 48 8e-06
09_06_0027 + 20318187-20318301,20318428-20318489,20318583-203186... 48 1e-05
09_06_0028 + 20328599-20328821,20330659-20330735,20330806-203309... 47 2e-05
08_02_1479 + 27390852-27391059,27392017-27392138,27392227-273923... 43 4e-04
07_03_1586 - 27929947-27930056,27930143-27930286,27930377-279307... 42 0.001
06_01_0186 + 1454533-1454710,1455299-1455420,1455508-1455806,145... 40 0.002
03_06_0418 + 33785482-33785870,33786098-33786173,33786985-337870... 36 0.045
10_02_0023 + 4306350-4306908,4308429-4308814,4308917-4308991,430... 34 0.14
02_05_0544 + 29876337-29876524,29876850-29876882,29878390-298785... 31 1.3
09_06_0188 - 21441377-21442201 31 1.7
05_04_0092 + 17851085-17851346,17852778-17852860,17853891-178539... 30 2.2
09_04_0736 - 19815427-19815642,19815782-19816903,19817006-198177... 30 3.0
01_05_0726 - 24630080-24630778,24630899-24631011,24631088-246311... 30 3.0
10_05_0104 + 9190779-9191847,9192544-9193332,9193652-9194049 29 3.9
01_01_0386 - 2985563-2985986,2986301-2986390,2986529-2986668,298... 29 3.9
05_01_0166 + 1145829-1145971,1146211-1146235,1147330-1147425,114... 29 5.2
12_01_0234 + 1755704-1756120,1756203-1756313,1756923-1757063,175... 29 6.8
02_05_0627 + 30463452-30463774,30463841-30463956,30464125-304643... 29 6.8
02_02_0658 + 12720873-12720906,12721201-12721664,12723069-127232... 28 9.0
01_06_0823 + 32234588-32234936,32236354-32237093,32237260-322373... 28 9.0
01_04_0103 + 16046012-16046018,16046214-16046366,16046908-160471... 28 9.0
>05_01_0398 + 3142934-3143110,3143697-3143930,3144180-3144353,
3144450-3144554,3145274-3145351,3146019-3146100,
3146519-3146681,3147100-3147435,3147511-3147641,
3147687-3147729,3147826-3148444,3148523-3148588,
3149103-3149265,3149557-3149635,3150232-3150431,
3150972-3151144,3151466-3151559,3152353-3152444,
3153146-3153436
Length = 1099
Score = 119 bits (286), Expect = 4e-27
Identities = 74/165 (44%), Positives = 92/165 (55%), Gaps = 16/165 (9%)
Frame = +1
Query: 322 ALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTFQERPKRXXXXXXXXXXXXXXXXXXSR 501
AL+SMQ FPF++KPMRIQY+K SDIIAK+ GTF R +R
Sbjct: 927 ALKSMQDFPFHNKPMRIQYAKTKSDIIAKADGTFVPRERRKRNDEKPEKKQKREQHHDVS 986
Query: 502 LIGHGI---------------PGAGILNNVNAEQ-PPNQILFLTNLPDETSEMMLSMLFN 633
+G G+ P AG + E PN ILF+ NLP ET+ MML MLF
Sbjct: 987 QVGLGVNAYPGVYGAPPLSQLPFAGAQKVMMPEIIVPNNILFVQNLPHETTPMMLQMLFC 1046
Query: 634 QFPGFKEVRLVPNRHDIAFVEFGNXMQSAAAKEALQGFKIPQHMQ 768
Q+PGFKEVR+V + IAFVE+G+ Q+ AA LQGFKI + Q
Sbjct: 1047 QYPGFKEVRMVEAKPGIAFVEYGDEGQATAAMNHLQGFKITKDNQ 1091
Score = 61.3 bits (142), Expect = 1e-09
Identities = 29/59 (49%), Positives = 40/59 (67%)
Frame = +3
Query: 141 PNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSAT 317
PN TIY SL A+FSQFG+ILD++A KTLK +GQA+V+F++++SAT
Sbjct: 867 PNVTIYINNLNEKIKLEELKKSLRAVFSQFGKILDVLAFKTLKHKGQAWVVFEDVASAT 925
>03_02_0694 -
10448712-10448996,10449030-10449074,10449588-10449647,
10449817-10449890,10451056-10451149,10451851-10452023,
10452526-10452598
Length = 267
Score = 84.6 bits (200), Expect = 1e-16
Identities = 38/65 (58%), Positives = 49/65 (75%)
Frame = +1
Query: 559 PPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAAAKEAL 738
PPN ILF+ NLP ET+ MML +LF Q+PGF+EVR++ + IAFVE+ + QS A +AL
Sbjct: 190 PPNNILFIQNLPAETTSMMLQILFQQYPGFREVRMIEAKPGIAFVEYEDDSQSMVAMQAL 249
Query: 739 QGFKI 753
QGFKI
Sbjct: 250 QGFKI 254
Score = 68.5 bits (160), Expect = 7e-12
Identities = 32/65 (49%), Positives = 43/65 (66%)
Frame = +3
Query: 132 DIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISS 311
DI PN T+Y SLYA+ SQ+G+ILD+VA+KT K+RGQA+V+F EI++
Sbjct: 5 DIPPNQTVYLRNLNEKVKKEELKRSLYALCSQYGRILDVVALKTPKLRGQAWVVFSEITA 64
Query: 312 ATGCF 326
AT F
Sbjct: 65 ATNAF 69
Score = 39.9 bits (89), Expect = 0.003
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +1
Query: 322 ALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTFQERPKR 441
A R +Q F FY K MR+QY+K SD +A G+ + KR
Sbjct: 68 AFRGLQEFDFYGKRMRVQYAKTRSDCLATEDGSTAPKEKR 107
>08_01_0925 +
9117217-9117576,9117674-9117749,9118460-9118592,
9118684-9118795,9119121-9119180,9119425-9119516,
9119628-9119697,9119776-9119880
Length = 335
Score = 48.4 bits (110), Expect = 8e-06
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Frame = +1
Query: 511 HGIPGAGILNNVNA-EQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV-PNRHDI 684
+ + + NN N + PP LF+ NL + E L LF+ PG+K+++++ +R+ +
Sbjct: 236 YNFSSSSLKNNQNTKDNPPCNTLFIGNLGETVIEEELRSLFSVQPGYKQMKVLRQDRNTV 295
Query: 685 AFVEFGNXMQSAAAKEALQGFKIP 756
F+EF + ++A LQG IP
Sbjct: 296 CFIEFEDVNAASAVHHNLQGAVIP 319
Score = 31.9 bits (69), Expect = 0.73
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 574 LFLTNLPDETSEMMLSMLFNQFPGFKEVRL-VPNRHDIAFVEFGNXMQSAAAKEALQ 741
+F+T LP + E L L PGF+ ++ + F F + + AAK ALQ
Sbjct: 64 IFITGLPTDVKERELHNLLRWLPGFEASQINFKGDQPMGFALFSSAHHAIAAKAALQ 120
>09_06_0027 +
20318187-20318301,20318428-20318489,20318583-20318661,
20319096-20319168,20319860-20319939,20320283-20320404
Length = 176
Score = 48.0 bits (109), Expect = 1e-05
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 7/78 (8%)
Frame = +1
Query: 550 AEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV--PNRHD-----IAFVEFGNX 708
A + ++ L++ LP ++ ++ +F F GF+EVRLV +RH + FV+F +
Sbjct: 15 ATRTESRTLYVEGLPSNCTKREVAHIFRPFSGFREVRLVNKESRHAGSCNLLCFVDFSSP 74
Query: 709 MQSAAAKEALQGFKIPQH 762
++ AA E LQG+K +H
Sbjct: 75 PEARAALETLQGYKFDEH 92
>09_06_0028 +
20328599-20328821,20330659-20330735,20330806-20330968,
20331095-20331156,20331250-20331328,20331818-20331898,
20332068-20332216,20332254-20332319,20332495-20332643,
20332722-20332761,20333001-20333015
Length = 367
Score = 46.8 bits (106), Expect = 2e-05
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Frame = +1
Query: 541 NVNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPN--RHD-----IAFVEF 699
N A ++ L++ LP ++ ++ +F F GF+EVRLV RH + FV+F
Sbjct: 128 NHGATITESRTLYVEGLPSNCTKREVAHIFRPFSGFREVRLVNKEIRHAGSCNLLCFVDF 187
Query: 700 GNXMQSAAAKEALQGFKIPQH 762
+ ++ AA E LQG+K +H
Sbjct: 188 SSPPEARAALETLQGYKFDEH 208
>08_02_1479 +
27390852-27391059,27392017-27392138,27392227-27392350,
27392641-27392702,27392778-27392859,27393338-27393410,
27397092-27397227,27397337-27397386,27397542-27397590,
27398352-27398831
Length = 461
Score = 42.7 bits (96), Expect = 4e-04
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 8/54 (14%)
Frame = +1
Query: 625 LFNQFPGFKEVRLVPNR--------HDIAFVEFGNXMQSAAAKEALQGFKIPQH 762
+F F GF+EVRLV H + FV+F N Q+ A EALQG+K +H
Sbjct: 153 IFRPFVGFREVRLVNKESRHPGGDPHVLCFVDFDNPAQATLALEALQGYKFDEH 206
>07_03_1586 -
27929947-27930056,27930143-27930286,27930377-27930704,
27931189-27931404,27932099-27932284,27932439-27932521,
27932621-27932752,27932943-27932999,27933352-27933412,
27933807-27933889,27933975-27934134
Length = 519
Score = 41.5 bits (93), Expect = 0.001
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Frame = +1
Query: 520 PGAGILNNVNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV----PNRHDIA 687
P +G+ N AEQ LF+ LP + E +S LF+Q+ ++++++ R A
Sbjct: 112 PQSGVQGNAAAEQK----LFIGMLPRDVKENEVSALFSQYGNIRQLKVLRSPQKTRKACA 167
Query: 688 FVEFGNXMQSAAAKEALQGFKI 753
+EFG+ + AA EAL G ++
Sbjct: 168 ILEFGSKEHARAAIEALNGTRV 189
>06_01_0186 +
1454533-1454710,1455299-1455420,1455508-1455806,
1455846-1455933,1456015-1456096,1457130-1457242
Length = 293
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 8/54 (14%)
Frame = +1
Query: 625 LFNQFPGFKEVRLVPN--RHD------IAFVEFGNXMQSAAAKEALQGFKIPQH 762
+F F GF+EVRLV RH + FV+F Q+A A +ALQG+K +H
Sbjct: 210 IFRPFVGFREVRLVSKEARHPGGDPILLCFVDFETASQAAIAMDALQGYKFDEH 263
>03_06_0418 +
33785482-33785870,33786098-33786173,33786985-33787071,
33788096-33788143
Length = 199
Score = 35.9 bits (79), Expect = 0.045
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Frame = +1
Query: 535 LNNVNAEQPP--NQILFLTNLPDETSEMMLSMLFNQFPGFKEVRL--VPNRHDIAFVEFG 702
L NA PP N++L++ NLP S + +F ++ +++RL + AFV +
Sbjct: 6 LRKSNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRLGNAKDTRGTAFVVYE 65
Query: 703 NXMQSAAAKEALQGFKI 753
+ + A + L GF +
Sbjct: 66 DIYDAKNAVDHLSGFNV 82
>10_02_0023 +
4306350-4306908,4308429-4308814,4308917-4308991,
4309330-4309539,4309649-4309961,4310035-4310130,
4310220-4310357,4310436-4310536,4310645-4310712,
4310800-4310849,4311790-4311848,4312399-4312530
Length = 728
Score = 34.3 bits (75), Expect = 0.14
Identities = 20/59 (33%), Positives = 33/59 (55%)
Frame = +1
Query: 574 LFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAAAKEALQGFK 750
LF+ LP + E + ++F+Q + +R+V R IAFV + + +A K+AL FK
Sbjct: 256 LFVGGLPKDCVEEDIRVVFSQCGEVESIRIVKKRKRIAFVRYADI---SATKKALTEFK 311
>02_05_0544 +
29876337-29876524,29876850-29876882,29878390-29878577,
29879755-29879811,29879909-29880061,29880812-29881278,
29881477-29881635,29881718-29881834,29881966-29882117,
29883436-29883530,29883619-29884525,29884604-29884688,
29884775-29884843,29885045-29885224,29885367-29885495
Length = 992
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +1
Query: 574 LFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAAAKEALQGFKI 753
L + NL S + +F + KE+R PN+ F+EF + + AA +L +I
Sbjct: 428 LVIFNLDPSVSNEEVRQIFGTYGEVKEIRETPNKKHHKFIEFYDVRAAEAALRSLNKSEI 487
>09_06_0188 - 21441377-21442201
Length = 274
Score = 30.7 bits (66), Expect = 1.7
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Frame = +3
Query: 207 LYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSATGCFAE-HARI 344
L+ +FS+FG++ + +K + + RG AFV+F A AE H ++
Sbjct: 86 LHTLFSRFGRVARVTVLKDRDSRRSRGVAFVLFVRREDAAAAAAEMHGKV 135
>05_04_0092 +
17851085-17851346,17852778-17852860,17853891-17853942,
17854054-17854179,17854291-17854373,17855127-17855309,
17855731-17855947,17856156-17856299,17856375-17856446,
17857166-17857230,17857517-17857584,17857968-17858007,
17858843-17859013
Length = 521
Score = 30.3 bits (65), Expect = 2.2
Identities = 17/62 (27%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Frame = +1
Query: 574 LFLTNLPDETSEMMLSMLFNQFPGFKEVRLV-----PNRHDIAFVEFGNXMQSAAAKEAL 738
LF+ LP ++ ++ LF+Q+ K+++++ ++ AF+++ Q+ AA EAL
Sbjct: 136 LFIGMLPKNVTDAEMTDLFSQYGNIKDLQILRGSQQTSKAGCAFLKYETKEQALAAIEAL 195
Query: 739 QG 744
G
Sbjct: 196 NG 197
>09_04_0736 -
19815427-19815642,19815782-19816903,19817006-19817707,
19817808-19817855,19817959-19818201,19819035-19819391
Length = 895
Score = 29.9 bits (64), Expect = 3.0
Identities = 19/65 (29%), Positives = 30/65 (46%)
Frame = +1
Query: 559 PPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAAAKEAL 738
P L++ NLP + +E + F+ V AFV F + ++ AA +AL
Sbjct: 43 PETNTLWVGNLPAQAAEDDVMASFSPHGALDCVMARAGPRSYAFVLFRSVPEARAALDAL 102
Query: 739 QGFKI 753
QG K+
Sbjct: 103 QGSKV 107
>01_05_0726 -
24630080-24630778,24630899-24631011,24631088-24631169,
24631248-24631337,24631412-24631469,24631661-24631756,
24631835-24631908,24632006-24632068,24634111-24634320,
24634869-24635048
Length = 554
Score = 29.9 bits (64), Expect = 3.0
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +1
Query: 556 QPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRL-VPNRHDIAFVEFGNXMQSAA 723
QPP++++ L NLP + +E L L + F + V + AFVEF + Q+ A
Sbjct: 12 QPPSKVIHLRNLPWDCTEEELVELGSPFGKVVNTKCNVGANRNQAFVEFADQNQAIA 68
>10_05_0104 + 9190779-9191847,9192544-9193332,9193652-9194049
Length = 751
Score = 29.5 bits (63), Expect = 3.9
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +1
Query: 538 NNVNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFG 702
NN+ + PN FLT+L + + + L + FN+ GF LV ++ ++ G
Sbjct: 278 NNILEAKTPNDRDFLTSLTNCSELVTLDLQFNRLSGFIPNTLVNLSQELIWIGLG 332
>01_01_0386 -
2985563-2985986,2986301-2986390,2986529-2986668,
2986798-2986893,2987003-2987042,2987760-2987887
Length = 305
Score = 29.5 bits (63), Expect = 3.9
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +1
Query: 565 NQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAAAKEALQG 744
N L++ L T L LF ++ VR V +H+ AFVEF + + A+ L G
Sbjct: 17 NTRLYVGRLSSRTRTRDLEDLFGRYG---RVRYVDMKHEFAFVEFSDARDADEARYNLDG 73
>05_01_0166 +
1145829-1145971,1146211-1146235,1147330-1147425,
1147544-1147645,1147767-1147889,1147996-1148622,
1148710-1148883,1148965-1149181,1149312-1149394,
1149478-1149573,1149676-1149724,1149850-1150088,
1150547-1150618,1150694-1150804,1150930-1151282,
1151377-1151464,1151691-1151789,1151860-1151991,
1152119-1152222,1153179-1153215,1153334-1153367,
1153451-1153467
Length = 1006
Score = 29.1 bits (62), Expect = 5.2
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 683 ISCLFGTRRTSLKPGN*LNNIDNIISEVSSGRF 585
+ C F T S KPG L+N D+++ E S+ F
Sbjct: 846 VHCKFFTFGDSFKPGGELSNFDDLLKERSATNF 878
>12_01_0234 +
1755704-1756120,1756203-1756313,1756923-1757063,
1757142-1757312,1757412-1757616,1757738-1757910,
1758021-1758103,1758250-1758389,1758569-1758645,
1758711-1758810,1759978-1760606
Length = 748
Score = 28.7 bits (61), Expect = 6.8
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Frame = +1
Query: 538 NNVNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNR--HD--IAFVEFGN 705
NN +A + +++ NLP ++ L LF ++V L P+R HD FV F +
Sbjct: 272 NNDSASTSQVKSVYVKNLPKNVTQAQLKRLFEHHGEIEKVVLPPSRGGHDNRYGFVHFKD 331
Query: 706 XMQSAAAKEALQGFKI 753
+ A + + +++
Sbjct: 332 RSMAMRALQNTERYEL 347
>02_05_0627 +
30463452-30463774,30463841-30463956,30464125-30464371,
30464458-30464555,30465216-30465284,30465752-30465820,
30465913-30466028
Length = 345
Score = 28.7 bits (61), Expect = 6.8
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Frame = +1
Query: 574 LFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNR-----HDIAFVEFGNXMQSAAAKEAL 738
LF+T L TSE L F F EV+++ ++ AF+E+ AA +A+
Sbjct: 281 LFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDKISKRSKGYAFIEYTTEEAGGAALKAM 340
Query: 739 QG 744
G
Sbjct: 341 NG 342
>02_02_0658 +
12720873-12720906,12721201-12721664,12723069-12723227,
12723308-12723424,12723570-12723721,12724594-12724685,
12724787-12725464,12725551-12725803,12725804-12725888,
12725969-12726037,12726489-12726668,12726989-12726994,
12727526-12727624
Length = 795
Score = 28.3 bits (60), Expect = 9.0
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +1
Query: 574 LFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAAAKEAL 738
L + NL S L +F F +E+R P++ F+EF + + +A +L
Sbjct: 232 LVIFNLEPAVSNEELLQIFGAFGEVREIRETPHKRHHRFIEFYDVRAAESALRSL 286
>01_06_0823 +
32234588-32234936,32236354-32237093,32237260-32237343,
32237909-32239263,32240399-32240460,32240544-32241144,
32241229-32241310,32241778-32241840
Length = 1111
Score = 28.3 bits (60), Expect = 9.0
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = +1
Query: 574 LFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAAAKEALQGFKI 753
L++ +L + +E ++ F +F P ++ A VE+GN M + A +QG +
Sbjct: 584 LWIGSLGNSAAESLVRSKFEEFGPLANFLFYPPKN-FALVEYGNIMHAVHAYGCMQGSSV 642
>01_04_0103 +
16046012-16046018,16046214-16046366,16046908-16047158,
16047509-16047631,16047818-16047931,16048153-16048315,
16048867-16049462
Length = 468
Score = 28.3 bits (60), Expect = 9.0
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -1
Query: 161 DINGMVGSYIHCHFDYKT 108
D NG V S +HCH D KT
Sbjct: 208 DGNGSVASEVHCHHDAKT 225
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,808,843
Number of Sequences: 37544
Number of extensions: 392915
Number of successful extensions: 794
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 788
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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