Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_C04
(917 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M15841-1|AAA36796.1| 225|Homo sapiens protein ( Human U2 small ... 163 1e-39
BC036737-1|AAH36737.1| 225|Homo sapiens small nuclear ribonucle... 163 1e-39
BC018022-1|AAH18022.1| 225|Homo sapiens small nuclear ribonucle... 163 1e-39
AL034428-1|CAB38777.2| 225|Homo sapiens small nuclear ribonucle... 163 1e-39
X06347-1|CAA29653.1| 282|Homo sapiens protein ( Human mRNA for ... 122 2e-27
M60784-1|AAA61245.1| 282|Homo sapiens U1 snRNP-specific protein... 122 2e-27
BC008290-1|AAH08290.1| 282|Homo sapiens small nuclear ribonucle... 122 2e-27
BC000405-1|AAH00405.1| 282|Homo sapiens small nuclear ribonucle... 122 2e-27
BC008311-1|AAH08311.1| 109|Homo sapiens Similar to small nuclea... 84 6e-16
AF271790-1|AAF76222.1| 569|Homo sapiens APOBEC-1 complementatio... 37 0.12
AF271789-1|AAF76221.1| 586|Homo sapiens APOBEC-1 complementatio... 37 0.12
AF209192-1|AAF34824.1| 586|Homo sapiens Apobec-1 complementatio... 37 0.12
BC130519-1|AAI30520.1| 594|Homo sapiens apobec-1 complementatio... 36 0.16
AL589794-7|CAI15763.1| 586|Homo sapiens APOBEC1 complementation... 36 0.16
AL589794-6|CAI15764.1| 594|Homo sapiens APOBEC1 complementation... 36 0.16
AL589794-5|CAI15762.1| 594|Homo sapiens APOBEC1 complementation... 36 0.16
AL512366-4|CAI14236.1| 586|Homo sapiens APOBEC1 complementation... 36 0.16
AL512366-3|CAI14235.1| 594|Homo sapiens APOBEC1 complementation... 36 0.16
AL512366-1|CAI14233.1| 594|Homo sapiens APOBEC1 complementation... 36 0.16
AK000324-1|BAA91086.1| 431|Homo sapiens protein ( Homo sapiens ... 36 0.16
AJ272079-1|CAB94755.1| 586|Homo sapiens APOBEC-1 stimulating pr... 36 0.16
AJ272078-1|CAB94754.1| 594|Homo sapiens APOBEC-1 stimulating pr... 36 0.16
BC028101-1|AAH28101.1| 485|Homo sapiens bruno-like 5, RNA bindi... 35 0.36
BC006516-1|AAH06516.3| 482|Homo sapiens NCL protein protein. 35 0.36
BC006494-1|AAH06494.3| 482|Homo sapiens NCL protein protein. 35 0.36
BC002343-1|AAH02343.3| 482|Homo sapiens NCL protein protein. 35 0.36
AK127608-1|BAC87055.1| 603|Homo sapiens protein ( Homo sapiens ... 35 0.36
AK091742-1|BAC03738.1| 687|Homo sapiens protein ( Homo sapiens ... 35 0.36
AF329266-1|AAK07476.1| 481|Homo sapiens CUG-BP and ETR-3 like f... 35 0.36
AC017104-2|AAY24247.1| 710|Homo sapiens unknown protein. 35 0.36
AB209211-1|BAD92448.1| 464|Homo sapiens TIA1 protein variant pr... 34 0.63
AC016700-3|AAX93193.1| 386|Homo sapiens unknown protein. 33 1.5
M96954-1|AAA36384.1| 375|Homo sapiens nucleolysin TIAR protein. 33 1.9
D78134-1|BAA11212.1| 172|Homo sapiens CIRP protein. 33 1.9
BT007210-1|AAP35874.1| 172|Homo sapiens cold inducible RNA bind... 33 1.9
BC000901-1|AAH00901.1| 172|Homo sapiens cold inducible RNA bind... 33 1.9
BC000403-1|AAH00403.1| 172|Homo sapiens cold inducible RNA bind... 33 1.9
AY633610-1|AAV33303.1| 374|Homo sapiens aging-associated gene 7... 33 1.9
AK128423-1|BAC87434.1| 135|Homo sapiens protein ( Homo sapiens ... 33 1.9
AF021336-1|AAC51787.1| 172|Homo sapiens DNA damage-inducible RN... 33 1.9
AC004258-1|AAC04895.1| 172|Homo sapiens CIRP protein. 33 1.9
BC015944-1|AAH15944.1| 214|Homo sapiens TIA1 protein protein. 32 3.4
D64015-1|BAA21559.1| 265|Homo sapiens T-cluster binding protein... 31 4.4
BC030025-1|AAH30025.1| 252|Homo sapiens TIAL1 protein protein. 31 4.4
AB209260-1|BAD92497.1| 183|Homo sapiens TIA1 cytotoxic granule-... 31 4.4
D63879-1|BAA09929.1| 963|Homo sapiens KIAA0156 protein. 31 5.9
BC111983-1|AAI11984.1| 963|Homo sapiens squamous cell carcinoma... 31 5.9
BC093784-1|AAH93784.1| 963|Homo sapiens squamous cell carcinoma... 31 5.9
AB020880-1|BAA78384.1| 963|Homo sapiens squamous cell carcinoma... 31 5.9
BC040844-1|AAH40844.1| 410|Homo sapiens SYNCRIP protein protein. 31 7.7
BC032643-1|AAH32643.1| 527|Homo sapiens SYNCRIP protein protein. 31 7.7
BC024283-1|AAH24283.1| 453|Homo sapiens Unknown (protein for IM... 31 7.7
BC015575-1|AAH15575.1| 417|Homo sapiens SYNCRIP protein protein. 31 7.7
AY034483-1|AAK59705.1| 561|Homo sapiens hnRNP Q1 protein. 31 7.7
AY034482-1|AAK59704.1| 588|Homo sapiens hnRNP Q2 protein. 31 7.7
AY034481-1|AAK59703.1| 623|Homo sapiens hnRNP Q3 protein. 31 7.7
AL136082-4|CAI20447.1| 623|Homo sapiens RP1-3J17.2 protein. 31 7.7
AL136082-3|CAI20446.1| 562|Homo sapiens RP1-3J17.2 protein. 31 7.7
AK222776-1|BAD96496.1| 623|Homo sapiens synaptotagmin binding, ... 31 7.7
AF155568-1|AAD38198.1| 562|Homo sapiens NSAP1 protein protein. 31 7.7
AF037448-1|AAC12926.1| 623|Homo sapiens Gry-rbp protein. 31 7.7
AB209098-1|BAD92335.1| 534|Homo sapiens synaptotagmin binding, ... 31 7.7
AB208812-1|BAD92049.1| 338|Homo sapiens H2.0-like homeo box 1 v... 31 7.7
>M15841-1|AAA36796.1| 225|Homo sapiens protein ( Human U2 small
nuclear RNA-associated B'' antigen mRNA, complete cds.
).
Length = 225
Score = 163 bits (395), Expect = 1e-39
Identities = 87/154 (56%), Positives = 102/154 (66%), Gaps = 7/154 (4%)
Frame = +1
Query: 322 ALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTFQERPKRXXXXXXXXXXXXXXXXXXSR 501
ALR +QGFPFY KPMRIQY+K DSDII+K +GTF ++ K+ ++
Sbjct: 65 ALRQLQGFPFYGKPMRIQYAKTDSDIISKMRGTFADKEKKKEKKKAKTVEQTATTT--NK 122
Query: 502 LIGHGIP------GAGILNNVNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRL 663
G G P G N + PPN ILFL NLP+ET+EMMLSMLFNQFPGFKEVRL
Sbjct: 123 KPGQGTPNSANTQGNSTPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRL 182
Query: 664 VPNRHDIAFVEFGNXMQSAAAKEALQGFKI-PQH 762
VP RHDIAFVEF N Q+ AA++ALQGFKI P H
Sbjct: 183 VPGRHDIAFVEFENDGQAGAARDALQGFKITPSH 216
Score = 84.2 bits (199), Expect = 6e-16
Identities = 39/68 (57%), Positives = 47/68 (69%)
Frame = +3
Query: 129 MDIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEIS 308
MDIRPNHTIY SLYA+FSQFG ++DIVA+KT+KMRGQAFVIFKE+
Sbjct: 1 MDIRPNHTIYINNMNDKIKKEELKRSLYALFSQFGHVVDIVALKTMKMRGQAFVIFKELG 60
Query: 309 SATGCFAE 332
S+T +
Sbjct: 61 SSTNALRQ 68
>BC036737-1|AAH36737.1| 225|Homo sapiens small nuclear
ribonucleoprotein polypeptide B'' protein.
Length = 225
Score = 163 bits (395), Expect = 1e-39
Identities = 87/154 (56%), Positives = 102/154 (66%), Gaps = 7/154 (4%)
Frame = +1
Query: 322 ALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTFQERPKRXXXXXXXXXXXXXXXXXXSR 501
ALR +QGFPFY KPMRIQY+K DSDII+K +GTF ++ K+ ++
Sbjct: 65 ALRQLQGFPFYGKPMRIQYAKTDSDIISKMRGTFADKEKKKEKKKAKTVEQTATTT--NK 122
Query: 502 LIGHGIP------GAGILNNVNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRL 663
G G P G N + PPN ILFL NLP+ET+EMMLSMLFNQFPGFKEVRL
Sbjct: 123 KPGQGTPNSANTQGNSTPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRL 182
Query: 664 VPNRHDIAFVEFGNXMQSAAAKEALQGFKI-PQH 762
VP RHDIAFVEF N Q+ AA++ALQGFKI P H
Sbjct: 183 VPGRHDIAFVEFENDGQAGAARDALQGFKITPSH 216
Score = 84.2 bits (199), Expect = 6e-16
Identities = 39/68 (57%), Positives = 47/68 (69%)
Frame = +3
Query: 129 MDIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEIS 308
MDIRPNHTIY SLYA+FSQFG ++DIVA+KT+KMRGQAFVIFKE+
Sbjct: 1 MDIRPNHTIYINNMNDKIKKEELKRSLYALFSQFGHVVDIVALKTMKMRGQAFVIFKELG 60
Query: 309 SATGCFAE 332
S+T +
Sbjct: 61 SSTNALRQ 68
>BC018022-1|AAH18022.1| 225|Homo sapiens small nuclear
ribonucleoprotein polypeptide B'' protein.
Length = 225
Score = 163 bits (395), Expect = 1e-39
Identities = 87/154 (56%), Positives = 102/154 (66%), Gaps = 7/154 (4%)
Frame = +1
Query: 322 ALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTFQERPKRXXXXXXXXXXXXXXXXXXSR 501
ALR +QGFPFY KPMRIQY+K DSDII+K +GTF ++ K+ ++
Sbjct: 65 ALRQLQGFPFYGKPMRIQYAKTDSDIISKMRGTFADKEKKKEKKKAKTVEQTATTT--NK 122
Query: 502 LIGHGIP------GAGILNNVNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRL 663
G G P G N + PPN ILFL NLP+ET+EMMLSMLFNQFPGFKEVRL
Sbjct: 123 KPGQGTPNSANTQGNSTPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRL 182
Query: 664 VPNRHDIAFVEFGNXMQSAAAKEALQGFKI-PQH 762
VP RHDIAFVEF N Q+ AA++ALQGFKI P H
Sbjct: 183 VPGRHDIAFVEFENDGQAGAARDALQGFKITPSH 216
Score = 84.2 bits (199), Expect = 6e-16
Identities = 39/68 (57%), Positives = 47/68 (69%)
Frame = +3
Query: 129 MDIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEIS 308
MDIRPNHTIY SLYA+FSQFG ++DIVA+KT+KMRGQAFVIFKE+
Sbjct: 1 MDIRPNHTIYINNMNDKIKKEELKRSLYALFSQFGHVVDIVALKTMKMRGQAFVIFKELG 60
Query: 309 SATGCFAE 332
S+T +
Sbjct: 61 SSTNALRQ 68
>AL034428-1|CAB38777.2| 225|Homo sapiens small nuclear
ribonucleoprotein polypeptide B'' protein.
Length = 225
Score = 163 bits (395), Expect = 1e-39
Identities = 87/154 (56%), Positives = 102/154 (66%), Gaps = 7/154 (4%)
Frame = +1
Query: 322 ALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTFQERPKRXXXXXXXXXXXXXXXXXXSR 501
ALR +QGFPFY KPMRIQY+K DSDII+K +GTF ++ K+ ++
Sbjct: 65 ALRQLQGFPFYGKPMRIQYAKTDSDIISKMRGTFADKEKKKEKKKAKTVEQTATTT--NK 122
Query: 502 LIGHGIP------GAGILNNVNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRL 663
G G P G N + PPN ILFL NLP+ET+EMMLSMLFNQFPGFKEVRL
Sbjct: 123 KPGQGTPNSANTQGNSTPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRL 182
Query: 664 VPNRHDIAFVEFGNXMQSAAAKEALQGFKI-PQH 762
VP RHDIAFVEF N Q+ AA++ALQGFKI P H
Sbjct: 183 VPGRHDIAFVEFENDGQAGAARDALQGFKITPSH 216
Score = 84.2 bits (199), Expect = 6e-16
Identities = 39/68 (57%), Positives = 47/68 (69%)
Frame = +3
Query: 129 MDIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEIS 308
MDIRPNHTIY SLYA+FSQFG ++DIVA+KT+KMRGQAFVIFKE+
Sbjct: 1 MDIRPNHTIYINNMNDKIKKEELKRSLYALFSQFGHVVDIVALKTMKMRGQAFVIFKELG 60
Query: 309 SATGCFAE 332
S+T +
Sbjct: 61 SSTNALRQ 68
>X06347-1|CAA29653.1| 282|Homo sapiens protein ( Human mRNA for U1
small nuclear RNP-specific A protein. ).
Length = 282
Score = 122 bits (294), Expect = 2e-27
Identities = 55/71 (77%), Positives = 64/71 (90%)
Frame = +1
Query: 550 AEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAAAK 729
+E PPN ILFLTNLP+ET+E+MLSMLFNQFPGFKEVRLVP RHDIAFVEF N +Q+ AA+
Sbjct: 202 SENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHDIAFVEFDNEVQAGAAR 261
Query: 730 EALQGFKIPQH 762
+ALQGFKI Q+
Sbjct: 262 DALQGFKITQN 272
Score = 79.8 bits (188), Expect = 1e-14
Identities = 39/62 (62%), Positives = 44/62 (70%)
Frame = +3
Query: 132 DIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISS 311
+ RPNHTIY SLYAIFSQFGQILDI+ ++LKMRGQAFVIFKE+SS
Sbjct: 5 ETRPNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFKEVSS 64
Query: 312 AT 317
AT
Sbjct: 65 AT 66
Score = 73.7 bits (173), Expect = 8e-13
Identities = 33/40 (82%), Positives = 36/40 (90%)
Frame = +1
Query: 322 ALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTFQERPKR 441
ALRSMQGFPFYDKPMRIQY+K DSDIIAK KGTF ER ++
Sbjct: 68 ALRSMQGFPFYDKPMRIQYAKTDSDIIAKMKGTFVERDRK 107
>M60784-1|AAA61245.1| 282|Homo sapiens U1 snRNP-specific protein A
protein.
Length = 282
Score = 122 bits (294), Expect = 2e-27
Identities = 55/71 (77%), Positives = 64/71 (90%)
Frame = +1
Query: 550 AEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAAAK 729
+E PPN ILFLTNLP+ET+E+MLSMLFNQFPGFKEVRLVP RHDIAFVEF N +Q+ AA+
Sbjct: 202 SENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHDIAFVEFDNEVQAGAAR 261
Query: 730 EALQGFKIPQH 762
+ALQGFKI Q+
Sbjct: 262 DALQGFKITQN 272
Score = 79.8 bits (188), Expect = 1e-14
Identities = 39/62 (62%), Positives = 44/62 (70%)
Frame = +3
Query: 132 DIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISS 311
+ RPNHTIY SLYAIFSQFGQILDI+ ++LKMRGQAFVIFKE+SS
Sbjct: 5 ETRPNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFKEVSS 64
Query: 312 AT 317
AT
Sbjct: 65 AT 66
Score = 73.7 bits (173), Expect = 8e-13
Identities = 33/40 (82%), Positives = 36/40 (90%)
Frame = +1
Query: 322 ALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTFQERPKR 441
ALRSMQGFPFYDKPMRIQY+K DSDIIAK KGTF ER ++
Sbjct: 68 ALRSMQGFPFYDKPMRIQYAKTDSDIIAKMKGTFVERDRK 107
>BC008290-1|AAH08290.1| 282|Homo sapiens small nuclear
ribonucleoprotein polypeptide A protein.
Length = 282
Score = 122 bits (294), Expect = 2e-27
Identities = 55/71 (77%), Positives = 64/71 (90%)
Frame = +1
Query: 550 AEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAAAK 729
+E PPN ILFLTNLP+ET+E+MLSMLFNQFPGFKEVRLVP RHDIAFVEF N +Q+ AA+
Sbjct: 202 SENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHDIAFVEFDNEVQAGAAR 261
Query: 730 EALQGFKIPQH 762
+ALQGFKI Q+
Sbjct: 262 DALQGFKITQN 272
Score = 79.8 bits (188), Expect = 1e-14
Identities = 39/62 (62%), Positives = 44/62 (70%)
Frame = +3
Query: 132 DIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISS 311
+ RPNHTIY SLYAIFSQFGQILDI+ ++LKMRGQAFVIFKE+SS
Sbjct: 5 ETRPNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFKEVSS 64
Query: 312 AT 317
AT
Sbjct: 65 AT 66
Score = 73.7 bits (173), Expect = 8e-13
Identities = 33/40 (82%), Positives = 36/40 (90%)
Frame = +1
Query: 322 ALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTFQERPKR 441
ALRSMQGFPFYDKPMRIQY+K DSDIIAK KGTF ER ++
Sbjct: 68 ALRSMQGFPFYDKPMRIQYAKTDSDIIAKMKGTFVERDRK 107
>BC000405-1|AAH00405.1| 282|Homo sapiens small nuclear
ribonucleoprotein polypeptide A protein.
Length = 282
Score = 122 bits (294), Expect = 2e-27
Identities = 55/71 (77%), Positives = 64/71 (90%)
Frame = +1
Query: 550 AEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAAAK 729
+E PPN ILFLTNLP+ET+E+MLSMLFNQFPGFKEVRLVP RHDIAFVEF N +Q+ AA+
Sbjct: 202 SENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHDIAFVEFDNEVQAGAAR 261
Query: 730 EALQGFKIPQH 762
+ALQGFKI Q+
Sbjct: 262 DALQGFKITQN 272
Score = 79.8 bits (188), Expect = 1e-14
Identities = 39/62 (62%), Positives = 44/62 (70%)
Frame = +3
Query: 132 DIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISS 311
+ RPNHTIY SLYAIFSQFGQILDI+ ++LKMRGQAFVIFKE+SS
Sbjct: 5 ETRPNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFKEVSS 64
Query: 312 AT 317
AT
Sbjct: 65 AT 66
Score = 73.7 bits (173), Expect = 8e-13
Identities = 33/40 (82%), Positives = 36/40 (90%)
Frame = +1
Query: 322 ALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTFQERPKR 441
ALRSMQGFPFYDKPMRIQY+K DSDIIAK KGTF ER ++
Sbjct: 68 ALRSMQGFPFYDKPMRIQYAKTDSDIIAKMKGTFVERDRK 107
>BC008311-1|AAH08311.1| 109|Homo sapiens Similar to small nuclear
ribonucleoprotein polypeptide B'' protein.
Length = 109
Score = 84.2 bits (199), Expect = 6e-16
Identities = 39/68 (57%), Positives = 47/68 (69%)
Frame = +3
Query: 129 MDIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEIS 308
MDIRPNHTIY SLYA+FSQFG ++DIVA+KT+KMRGQAFVIFKE+
Sbjct: 1 MDIRPNHTIYINNMNDKIKKEELKRSLYALFSQFGHVVDIVALKTMKMRGQAFVIFKELG 60
Query: 309 SATGCFAE 332
S+T +
Sbjct: 61 SSTNALRQ 68
Score = 64.9 bits (151), Expect = 4e-10
Identities = 27/40 (67%), Positives = 34/40 (85%)
Frame = +1
Query: 322 ALRSMQGFPFYDKPMRIQYSKIDSDIIAKSKGTFQERPKR 441
ALR +QGFPFY KPMRIQY+K DSDII+K +GTF ++ K+
Sbjct: 65 ALRQLQGFPFYGKPMRIQYAKTDSDIISKMRGTFADKEKK 104
>AF271790-1|AAF76222.1| 569|Homo sapiens APOBEC-1 complementation
factor related protein protein.
Length = 569
Score = 36.7 bits (81), Expect = 0.12
Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Frame = +1
Query: 499 RLIGHGIPGAGILNNVNAEQPPN---QILFLTNLPDETSEMMLSMLFNQF-PGFKEVRLV 666
+L GHGI V ++ +IL++ NL TSE M+ FN PG V V
Sbjct: 188 QLWGHGIAVDWAEPEVEVDEDTMSSVKILYVRNLMLSTSEEMIEKEFNNIKPG--AVERV 245
Query: 667 PNRHDIAFVEFGNXMQSAAAKEALQG 744
D AFV F N + A +AL G
Sbjct: 246 KKIRDYAFVHFSNRKDAVEAMKALNG 271
>AF271789-1|AAF76221.1| 586|Homo sapiens APOBEC-1 complementation
factor protein.
Length = 586
Score = 36.7 bits (81), Expect = 0.12
Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Frame = +1
Query: 499 RLIGHGIPGAGILNNVNAEQPPN---QILFLTNLPDETSEMMLSMLFNQF-PGFKEVRLV 666
+L GHGI V ++ +IL++ NL TSE M+ FN PG V V
Sbjct: 205 QLWGHGIAVDWAEPEVEVDEDTMSSVKILYVRNLMLSTSEEMIEKEFNNIKPG--AVERV 262
Query: 667 PNRHDIAFVEFGNXMQSAAAKEALQG 744
D AFV F N + A +AL G
Sbjct: 263 KKIRDYAFVHFSNRKDAVEAMKALNG 288
>AF209192-1|AAF34824.1| 586|Homo sapiens Apobec-1 complementation
factor protein.
Length = 586
Score = 36.7 bits (81), Expect = 0.12
Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Frame = +1
Query: 499 RLIGHGIPGAGILNNVNAEQPPN---QILFLTNLPDETSEMMLSMLFNQF-PGFKEVRLV 666
+L GHGI V ++ +IL++ NL TSE M+ FN PG V V
Sbjct: 205 QLWGHGIAVDWAEPEVEVDEDTMSSVKILYVRNLMLSTSEEMIEKEFNNIKPG--AVERV 262
Query: 667 PNRHDIAFVEFGNXMQSAAAKEALQG 744
D AFV F N + A +AL G
Sbjct: 263 KKIRDYAFVHFSNRKDAVEAMKALNG 288
>BC130519-1|AAI30520.1| 594|Homo sapiens apobec-1 complementation
factor protein.
Length = 594
Score = 36.3 bits (80), Expect = 0.16
Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Frame = +1
Query: 499 RLIGHGIPGAGILNNVNAEQPPN---QILFLTNLPDETSEMMLSMLFNQF-PGFKEVRLV 666
+L GHGI V ++ +IL++ NL TSE M+ FN PG V V
Sbjct: 205 QLWGHGIAVDWAEPEVEVDEDTMSSVKILYVRNLMLSTSEEMIEKEFNNIKPG--AVERV 262
Query: 667 PNRHDIAFVEFGNXMQSAAAKEALQG 744
D AFV F N + A +AL G
Sbjct: 263 KKIRDYAFVHFSNREDAVEAMKALNG 288
>AL589794-7|CAI15763.1| 586|Homo sapiens APOBEC1 complementation
factor protein.
Length = 586
Score = 36.3 bits (80), Expect = 0.16
Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Frame = +1
Query: 499 RLIGHGIPGAGILNNVNAEQPPN---QILFLTNLPDETSEMMLSMLFNQF-PGFKEVRLV 666
+L GHGI V ++ +IL++ NL TSE M+ FN PG V V
Sbjct: 205 QLWGHGIAVDWAEPEVEVDEDTMSSVKILYVRNLMLSTSEEMIEKEFNNIKPG--AVERV 262
Query: 667 PNRHDIAFVEFGNXMQSAAAKEALQG 744
D AFV F N + A +AL G
Sbjct: 263 KKIRDYAFVHFSNREDAVEAMKALNG 288
>AL589794-6|CAI15764.1| 594|Homo sapiens APOBEC1 complementation
factor protein.
Length = 594
Score = 36.3 bits (80), Expect = 0.16
Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Frame = +1
Query: 499 RLIGHGIPGAGILNNVNAEQPPN---QILFLTNLPDETSEMMLSMLFNQF-PGFKEVRLV 666
+L GHGI V ++ +IL++ NL TSE M+ FN PG V V
Sbjct: 205 QLWGHGIAVDWAEPEVEVDEDTMSSVKILYVRNLMLSTSEEMIEKEFNNIKPG--AVERV 262
Query: 667 PNRHDIAFVEFGNXMQSAAAKEALQG 744
D AFV F N + A +AL G
Sbjct: 263 KKIRDYAFVHFSNREDAVEAMKALNG 288
>AL589794-5|CAI15762.1| 594|Homo sapiens APOBEC1 complementation
factor protein.
Length = 594
Score = 36.3 bits (80), Expect = 0.16
Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Frame = +1
Query: 499 RLIGHGIPGAGILNNVNAEQPPN---QILFLTNLPDETSEMMLSMLFNQF-PGFKEVRLV 666
+L GHGI V ++ +IL++ NL TSE M+ FN PG V V
Sbjct: 213 QLWGHGIAVDWAEPEVEVDEDTMSSVKILYVRNLMLSTSEEMIEKEFNNIKPG--AVERV 270
Query: 667 PNRHDIAFVEFGNXMQSAAAKEALQG 744
D AFV F N + A +AL G
Sbjct: 271 KKIRDYAFVHFSNREDAVEAMKALNG 296
>AL512366-4|CAI14236.1| 586|Homo sapiens APOBEC1 complementation
factor protein.
Length = 586
Score = 36.3 bits (80), Expect = 0.16
Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Frame = +1
Query: 499 RLIGHGIPGAGILNNVNAEQPPN---QILFLTNLPDETSEMMLSMLFNQF-PGFKEVRLV 666
+L GHGI V ++ +IL++ NL TSE M+ FN PG V V
Sbjct: 205 QLWGHGIAVDWAEPEVEVDEDTMSSVKILYVRNLMLSTSEEMIEKEFNNIKPG--AVERV 262
Query: 667 PNRHDIAFVEFGNXMQSAAAKEALQG 744
D AFV F N + A +AL G
Sbjct: 263 KKIRDYAFVHFSNREDAVEAMKALNG 288
>AL512366-3|CAI14235.1| 594|Homo sapiens APOBEC1 complementation
factor protein.
Length = 594
Score = 36.3 bits (80), Expect = 0.16
Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Frame = +1
Query: 499 RLIGHGIPGAGILNNVNAEQPPN---QILFLTNLPDETSEMMLSMLFNQF-PGFKEVRLV 666
+L GHGI V ++ +IL++ NL TSE M+ FN PG V V
Sbjct: 205 QLWGHGIAVDWAEPEVEVDEDTMSSVKILYVRNLMLSTSEEMIEKEFNNIKPG--AVERV 262
Query: 667 PNRHDIAFVEFGNXMQSAAAKEALQG 744
D AFV F N + A +AL G
Sbjct: 263 KKIRDYAFVHFSNREDAVEAMKALNG 288
>AL512366-1|CAI14233.1| 594|Homo sapiens APOBEC1 complementation
factor protein.
Length = 594
Score = 36.3 bits (80), Expect = 0.16
Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Frame = +1
Query: 499 RLIGHGIPGAGILNNVNAEQPPN---QILFLTNLPDETSEMMLSMLFNQF-PGFKEVRLV 666
+L GHGI V ++ +IL++ NL TSE M+ FN PG V V
Sbjct: 213 QLWGHGIAVDWAEPEVEVDEDTMSSVKILYVRNLMLSTSEEMIEKEFNNIKPG--AVERV 270
Query: 667 PNRHDIAFVEFGNXMQSAAAKEALQG 744
D AFV F N + A +AL G
Sbjct: 271 KKIRDYAFVHFSNREDAVEAMKALNG 296
>AK000324-1|BAA91086.1| 431|Homo sapiens protein ( Homo sapiens
cDNA FLJ20317 fis, clone HEP08678. ).
Length = 431
Score = 36.3 bits (80), Expect = 0.16
Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Frame = +1
Query: 499 RLIGHGIPGAGILNNVNAEQPPN---QILFLTNLPDETSEMMLSMLFNQF-PGFKEVRLV 666
+L GHGI V ++ +IL++ NL TSE M+ FN PG V V
Sbjct: 50 QLWGHGIAVDWAEPEVEVDEDTMSSVKILYVRNLMLSTSEEMIEKEFNNIKPG--AVERV 107
Query: 667 PNRHDIAFVEFGNXMQSAAAKEALQG 744
D AFV F N + A +AL G
Sbjct: 108 KKIRDYAFVHFSNREDAVEAMKALNG 133
>AJ272079-1|CAB94755.1| 586|Homo sapiens APOBEC-1 stimulating
protein protein.
Length = 586
Score = 36.3 bits (80), Expect = 0.16
Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Frame = +1
Query: 499 RLIGHGIPGAGILNNVNAEQPPN---QILFLTNLPDETSEMMLSMLFNQF-PGFKEVRLV 666
+L GHGI V ++ +IL++ NL TSE M+ FN PG V V
Sbjct: 205 QLWGHGIAVDWAEPEVEVDEDTMSSVKILYVRNLMLSTSEEMIEKEFNNIKPG--AVERV 262
Query: 667 PNRHDIAFVEFGNXMQSAAAKEALQG 744
D AFV F N + A +AL G
Sbjct: 263 KKIRDYAFVHFSNREDAVEAMKALNG 288
>AJ272078-1|CAB94754.1| 594|Homo sapiens APOBEC-1 stimulating
protein protein.
Length = 594
Score = 36.3 bits (80), Expect = 0.16
Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Frame = +1
Query: 499 RLIGHGIPGAGILNNVNAEQPPN---QILFLTNLPDETSEMMLSMLFNQF-PGFKEVRLV 666
+L GHGI V ++ +IL++ NL TSE M+ FN PG V V
Sbjct: 205 QLWGHGIAVDWAEPEVEVDEDTMSSVKILYVRNLMLSTSEEMIEKEFNNIKPG--AVERV 262
Query: 667 PNRHDIAFVEFGNXMQSAAAKEALQG 744
D AFV F N + A +AL G
Sbjct: 263 KKIRDYAFVHFSNREDAVEAMKALNG 288
>BC028101-1|AAH28101.1| 485|Homo sapiens bruno-like 5, RNA binding
protein (Drosophila) protein.
Length = 485
Score = 35.1 bits (77), Expect = 0.36
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Frame = +1
Query: 505 IGHGIPGAG-ILNNVNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHD 681
I H +P +L E P LF+ +LP E + L+ +F F ++ +R
Sbjct: 378 IAHSVPQPPPLLQQQQREGPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRAT 437
Query: 682 -----IAFVEFGNXMQSAAAKEALQGFKI 753
FV F N + AA +A+ GF+I
Sbjct: 438 NQSKCFGFVSFDNPASAQAAIQAMNGFQI 466
>BC006516-1|AAH06516.3| 482|Homo sapiens NCL protein protein.
Length = 482
Score = 35.1 bits (77), Expect = 0.36
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Frame = +1
Query: 547 NAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHD-----IAFVEFGNXM 711
NA P++ LF+ L ++T+E L F G R+V +R FV+F +
Sbjct: 337 NARSQPSKTLFVKGLSEDTTEETLK---ESFDGSVRARIVTDRETGSSKGFGFVDFNSEE 393
Query: 712 QSAAAKEALQGFKI 753
+ AAKEA++ +I
Sbjct: 394 DAKAAKEAMEDGEI 407
>BC006494-1|AAH06494.3| 482|Homo sapiens NCL protein protein.
Length = 482
Score = 35.1 bits (77), Expect = 0.36
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Frame = +1
Query: 547 NAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHD-----IAFVEFGNXM 711
NA P++ LF+ L ++T+E L F G R+V +R FV+F +
Sbjct: 337 NARSQPSKTLFVKGLSEDTTEETLK---ESFDGSVRARIVTDRETGSSKGFGFVDFNSEE 393
Query: 712 QSAAAKEALQGFKI 753
+ AAKEA++ +I
Sbjct: 394 DAKAAKEAMEDGEI 407
>BC002343-1|AAH02343.3| 482|Homo sapiens NCL protein protein.
Length = 482
Score = 35.1 bits (77), Expect = 0.36
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Frame = +1
Query: 547 NAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHD-----IAFVEFGNXM 711
NA P++ LF+ L ++T+E L F G R+V +R FV+F +
Sbjct: 337 NARSQPSKTLFVKGLSEDTTEETLK---ESFDGSVRARIVTDRETGSSKGFGFVDFNSEE 393
Query: 712 QSAAAKEALQGFKI 753
+ AAKEA++ +I
Sbjct: 394 DAKAAKEAMEDGEI 407
>AK127608-1|BAC87055.1| 603|Homo sapiens protein ( Homo sapiens
cDNA FLJ45706 fis, clone FEBRA2028457, highly similar
to Nucleolin. ).
Length = 603
Score = 35.1 bits (77), Expect = 0.36
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Frame = +1
Query: 547 NAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHD-----IAFVEFGNXM 711
NA P++ LF+ L ++T+E L F G R+V +R FV+F +
Sbjct: 458 NARSQPSKTLFVKGLSEDTTEETLK---ESFDGSVRARIVTDRETGSSKGFGFVDFNSEE 514
Query: 712 QSAAAKEALQGFKI 753
+ AAKEA++ +I
Sbjct: 515 DAKAAKEAMEDGEI 528
>AK091742-1|BAC03738.1| 687|Homo sapiens protein ( Homo sapiens
cDNA FLJ34423 fis, clone HHDPC2008123, highly similar to
NUCLEOLIN. ).
Length = 687
Score = 35.1 bits (77), Expect = 0.36
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Frame = +1
Query: 547 NAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHD-----IAFVEFGNXM 711
NA P++ LF+ L ++T+E L F G R+V +R FV+F +
Sbjct: 542 NARSQPSKTLFVKGLSEDTTEETLK---ESFDGSVRARIVTDRETGSSKGFGFVDFNSEE 598
Query: 712 QSAAAKEALQGFKI 753
+ AAKEA++ +I
Sbjct: 599 DAKAAKEAMEDGEI 612
>AF329266-1|AAK07476.1| 481|Homo sapiens CUG-BP and ETR-3 like
factor 5 protein.
Length = 481
Score = 35.1 bits (77), Expect = 0.36
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Frame = +1
Query: 505 IGHGIPGAG-ILNNVNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHD 681
I H +P +L E P LF+ +LP E + L+ +F F ++ +R
Sbjct: 378 IAHSVPQPPPLLQQQQREGPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRAT 437
Query: 682 -----IAFVEFGNXMQSAAAKEALQGFKI 753
FV F N + AA +A+ GF+I
Sbjct: 438 NQSKCFGFVSFDNPASAQAAIQAMNGFQI 466
>AC017104-2|AAY24247.1| 710|Homo sapiens unknown protein.
Length = 710
Score = 35.1 bits (77), Expect = 0.36
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Frame = +1
Query: 547 NAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHD-----IAFVEFGNXM 711
NA P++ LF+ L ++T+E L F G R+V +R FV+F +
Sbjct: 565 NARSQPSKTLFVKGLSEDTTEETLK---ESFDGSVRARIVTDRETGSSKGFGFVDFNSEE 621
Query: 712 QSAAAKEALQGFKI 753
+ AAKEA++ +I
Sbjct: 622 DAKAAKEAMEDGEI 635
>AB209211-1|BAD92448.1| 464|Homo sapiens TIA1 protein variant
protein.
Length = 464
Score = 34.3 bits (75), Expect = 0.63
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Frame = +1
Query: 520 PGAGILNNVNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV---PNRHDIAF 690
PG E + L++ NL + +E ++ LF+Q K +++ F
Sbjct: 29 PGGAAATAAAMEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCF 88
Query: 691 VEFGNXMQSAAAKEALQGFKI 753
VEF +AAA A+ G KI
Sbjct: 89 VEFHEHRHAAAALAAMNGRKI 109
Score = 33.1 bits (72), Expect = 1.5
Identities = 18/74 (24%), Positives = 35/74 (47%)
Frame = +1
Query: 544 VNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAA 723
VN P N ++ + +E ++ F+ F E+R+ P++ +FV F + +A
Sbjct: 285 VNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDK-GYSFVRFNSHESAAH 343
Query: 724 AKEALQGFKIPQHM 765
A ++ G I H+
Sbjct: 344 AIVSVNGTTIEGHV 357
>AC016700-3|AAX93193.1| 386|Homo sapiens unknown protein.
Length = 386
Score = 33.1 bits (72), Expect = 1.5
Identities = 18/74 (24%), Positives = 35/74 (47%)
Frame = +1
Query: 544 VNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAA 723
VN P N ++ + +E ++ F+ F E+R+ P++ +FV F + +A
Sbjct: 206 VNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDK-GYSFVRFNSHESAAH 264
Query: 724 AKEALQGFKIPQHM 765
A ++ G I H+
Sbjct: 265 AIVSVNGTTIEGHV 278
Score = 31.9 bits (69), Expect = 3.4
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Frame = +1
Query: 574 LFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPN---RHDIAFVEFGNXMQSAAAKEALQG 744
L++ NL + +E ++ LF+Q K +++ + FVEF +AAA A+ G
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNG 68
Query: 745 FKI 753
KI
Sbjct: 69 RKI 71
>M96954-1|AAA36384.1| 375|Homo sapiens nucleolysin TIAR protein.
Length = 375
Score = 32.7 bits (71), Expect = 1.9
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Frame = +1
Query: 574 LFLTNLPDETSEMMLSMLFNQFPGFKEVRLVP---NRHDIAFVEFGNXMQSAAAKEALQG 744
L++ NL + +E+++ LF+Q K +++ + FVEF +AAA A+ G
Sbjct: 11 LYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNG 70
Query: 745 FKI 753
KI
Sbjct: 71 RKI 73
Score = 31.5 bits (68), Expect = 4.4
Identities = 17/74 (22%), Positives = 33/74 (44%)
Frame = +1
Query: 544 VNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAA 723
VN P N ++ + ++ ++ F+ F E+R+ P + +FV F +A
Sbjct: 197 VNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEK-GYSFVRFSTHESAAH 255
Query: 724 AKEALQGFKIPQHM 765
A ++ G I H+
Sbjct: 256 AIVSVNGTTIEGHV 269
>D78134-1|BAA11212.1| 172|Homo sapiens CIRP protein.
Length = 172
Score = 32.7 bits (71), Expect = 1.9
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Frame = +3
Query: 204 SLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSA 314
SL +FS++GQI ++V +K T + RG FV F+ I A
Sbjct: 21 SLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDA 60
>BT007210-1|AAP35874.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 32.7 bits (71), Expect = 1.9
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Frame = +3
Query: 204 SLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSA 314
SL +FS++GQI ++V +K T + RG FV F+ I A
Sbjct: 21 SLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDA 60
>BC000901-1|AAH00901.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 32.7 bits (71), Expect = 1.9
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Frame = +3
Query: 204 SLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSA 314
SL +FS++GQI ++V +K T + RG FV F+ I A
Sbjct: 21 SLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDA 60
>BC000403-1|AAH00403.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 32.7 bits (71), Expect = 1.9
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Frame = +3
Query: 204 SLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSA 314
SL +FS++GQI ++V +K T + RG FV F+ I A
Sbjct: 21 SLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDA 60
>AY633610-1|AAV33303.1| 374|Homo sapiens aging-associated gene 7
protein protein.
Length = 374
Score = 32.7 bits (71), Expect = 1.9
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Frame = +1
Query: 574 LFLTNLPDETSEMMLSMLFNQFPGFKEVRLVP---NRHDIAFVEFGNXMQSAAAKEALQG 744
L++ NL + +E+++ LF+Q K +++ + FVEF +AAA A+ G
Sbjct: 11 LYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNG 70
Query: 745 FKI 753
KI
Sbjct: 71 RKI 73
Score = 31.5 bits (68), Expect = 4.4
Identities = 17/74 (22%), Positives = 33/74 (44%)
Frame = +1
Query: 544 VNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAA 723
VN P N ++ + ++ ++ F+ F E+R+ P + +FV F +A
Sbjct: 197 VNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEK-GYSFVRFSTHESAAH 255
Query: 724 AKEALQGFKIPQHM 765
A ++ G I H+
Sbjct: 256 AIVSVNGTTIEGHV 269
>AK128423-1|BAC87434.1| 135|Homo sapiens protein ( Homo sapiens
cDNA FLJ46566 fis, clone THYMU3040829, moderately
similar to Cold-inducible RNA-binding protein. ).
Length = 135
Score = 32.7 bits (71), Expect = 1.9
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Frame = +3
Query: 204 SLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSA 314
SL +FS++GQI ++V +K T + RG FV F+ I A
Sbjct: 21 SLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDA 60
>AF021336-1|AAC51787.1| 172|Homo sapiens DNA damage-inducible RNA
binding protein protein.
Length = 172
Score = 32.7 bits (71), Expect = 1.9
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Frame = +3
Query: 204 SLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSA 314
SL +FS++GQI ++V +K T + RG FV F+ I A
Sbjct: 21 SLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDA 60
>AC004258-1|AAC04895.1| 172|Homo sapiens CIRP protein.
Length = 172
Score = 32.7 bits (71), Expect = 1.9
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Frame = +3
Query: 204 SLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSA 314
SL +FS++GQI ++V +K T + RG FV F+ I A
Sbjct: 21 SLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDA 60
>BC015944-1|AAH15944.1| 214|Homo sapiens TIA1 protein protein.
Length = 214
Score = 31.9 bits (69), Expect = 3.4
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Frame = +1
Query: 574 LFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPN---RHDIAFVEFGNXMQSAAAKEALQG 744
L++ NL + +E ++ LF+Q K +++ + FVEF +AAA A+ G
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNG 68
Query: 745 FKI 753
KI
Sbjct: 69 RKI 71
>D64015-1|BAA21559.1| 265|Homo sapiens T-cluster binding protein
protein.
Length = 265
Score = 31.5 bits (68), Expect = 4.4
Identities = 17/74 (22%), Positives = 33/74 (44%)
Frame = +1
Query: 544 VNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAA 723
VN P N ++ + ++ ++ F+ F E+R+ P + +FV F +A
Sbjct: 158 VNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEK-GYSFVRFSTHESAAH 216
Query: 724 AKEALQGFKIPQHM 765
A ++ G I H+
Sbjct: 217 AIVSVNGTTIEGHV 230
>BC030025-1|AAH30025.1| 252|Homo sapiens TIAL1 protein protein.
Length = 252
Score = 31.5 bits (68), Expect = 4.4
Identities = 17/74 (22%), Positives = 33/74 (44%)
Frame = +1
Query: 544 VNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAA 723
VN P N ++ + ++ ++ F+ F E+R+ P + +FV F +A
Sbjct: 74 VNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEK-GYSFVRFSTHESAAH 132
Query: 724 AKEALQGFKIPQHM 765
A ++ G I H+
Sbjct: 133 AIVSVNGTTIEGHV 146
>AB209260-1|BAD92497.1| 183|Homo sapiens TIA1 cytotoxic
granule-associated RNA-binding protein-like 1 isoform 2
variant protein.
Length = 183
Score = 31.5 bits (68), Expect = 4.4
Identities = 17/74 (22%), Positives = 33/74 (44%)
Frame = +1
Query: 544 VNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAA 723
VN P N ++ + ++ ++ F+ F E+R+ P + +FV F +A
Sbjct: 76 VNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEK-GYSFVRFSTHESAAH 134
Query: 724 AKEALQGFKIPQHM 765
A ++ G I H+
Sbjct: 135 AIVSVNGTTIEGHV 148
>D63879-1|BAA09929.1| 963|Homo sapiens KIAA0156 protein.
Length = 963
Score = 31.1 bits (67), Expect = 5.9
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +1
Query: 574 LFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNR----HDIAFVEFGNXMQSAAAKEALQ 741
LF++ LP ++ L + K++RLV NR +A+VE+ N Q++ A +
Sbjct: 803 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMKMD 862
Query: 742 GFKIPQHM 765
G I +++
Sbjct: 863 GMTIKENI 870
>BC111983-1|AAI11984.1| 963|Homo sapiens squamous cell carcinoma
antigen recognized by T cells 3 protein.
Length = 963
Score = 31.1 bits (67), Expect = 5.9
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +1
Query: 574 LFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNR----HDIAFVEFGNXMQSAAAKEALQ 741
LF++ LP ++ L + K++RLV NR +A+VE+ N Q++ A +
Sbjct: 803 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMKMD 862
Query: 742 GFKIPQHM 765
G I +++
Sbjct: 863 GMTIKENI 870
>BC093784-1|AAH93784.1| 963|Homo sapiens squamous cell carcinoma
antigen recognized by T cells 3 protein.
Length = 963
Score = 31.1 bits (67), Expect = 5.9
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +1
Query: 574 LFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNR----HDIAFVEFGNXMQSAAAKEALQ 741
LF++ LP ++ L + K++RLV NR +A+VE+ N Q++ A +
Sbjct: 803 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMKMD 862
Query: 742 GFKIPQHM 765
G I +++
Sbjct: 863 GMTIKENI 870
>AB020880-1|BAA78384.1| 963|Homo sapiens squamous cell carcinoma
antigen SART-3 protein.
Length = 963
Score = 31.1 bits (67), Expect = 5.9
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +1
Query: 574 LFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNR----HDIAFVEFGNXMQSAAAKEALQ 741
LF++ LP ++ L + K++RLV NR +A+VE+ N Q++ A +
Sbjct: 803 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMKMD 862
Query: 742 GFKIPQHM 765
G I +++
Sbjct: 863 GMTIKENI 870
>BC040844-1|AAH40844.1| 410|Homo sapiens SYNCRIP protein protein.
Length = 410
Score = 30.7 bits (66), Expect = 7.7
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +1
Query: 568 QILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAAAKEALQG 744
++LF+ NL + +E +L F+QF + V+ + D AF+ F + A E + G
Sbjct: 186 KVLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNG 241
>BC032643-1|AAH32643.1| 527|Homo sapiens SYNCRIP protein protein.
Length = 527
Score = 30.7 bits (66), Expect = 7.7
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +1
Query: 568 QILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAAAKEALQG 744
++LF+ NL + +E +L F+QF + V+ + D AF+ F + A E + G
Sbjct: 303 KVLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNG 358
>BC024283-1|AAH24283.1| 453|Homo sapiens Unknown (protein for
IMAGE:4079825) protein.
Length = 453
Score = 30.7 bits (66), Expect = 7.7
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +1
Query: 568 QILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAAAKEALQG 744
++LF+ NL + +E +L F+QF + V+ + D AF+ F + A E + G
Sbjct: 374 KVLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNG 429
>BC015575-1|AAH15575.1| 417|Homo sapiens SYNCRIP protein protein.
Length = 417
Score = 30.7 bits (66), Expect = 7.7
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +1
Query: 568 QILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAAAKEALQG 744
++LF+ NL + +E +L F+QF + V+ + D AF+ F + A E + G
Sbjct: 338 KVLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNG 393
>AY034483-1|AAK59705.1| 561|Homo sapiens hnRNP Q1 protein.
Length = 561
Score = 30.7 bits (66), Expect = 7.7
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +1
Query: 568 QILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAAAKEALQG 744
++LF+ NL + +E +L F+QF + V+ + D AF+ F + A E + G
Sbjct: 338 KVLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNG 393
>AY034482-1|AAK59704.1| 588|Homo sapiens hnRNP Q2 protein.
Length = 588
Score = 30.7 bits (66), Expect = 7.7
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +1
Query: 568 QILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAAAKEALQG 744
++LF+ NL + +E +L F+QF + V+ + D AF+ F + A E + G
Sbjct: 303 KVLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNG 358
>AY034481-1|AAK59703.1| 623|Homo sapiens hnRNP Q3 protein.
Length = 623
Score = 30.7 bits (66), Expect = 7.7
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +1
Query: 568 QILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAAAKEALQG 744
++LF+ NL + +E +L F+QF + V+ + D AF+ F + A E + G
Sbjct: 338 KVLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNG 393
>AL136082-4|CAI20447.1| 623|Homo sapiens RP1-3J17.2 protein.
Length = 623
Score = 30.7 bits (66), Expect = 7.7
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +1
Query: 568 QILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAAAKEALQG 744
++LF+ NL + +E +L F+QF + V+ + D AF+ F + A E + G
Sbjct: 338 KVLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNG 393
>AL136082-3|CAI20446.1| 562|Homo sapiens RP1-3J17.2 protein.
Length = 562
Score = 30.7 bits (66), Expect = 7.7
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +1
Query: 568 QILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAAAKEALQG 744
++LF+ NL + +E +L F+QF + V+ + D AF+ F + A E + G
Sbjct: 338 KVLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNG 393
>AK222776-1|BAD96496.1| 623|Homo sapiens synaptotagmin binding,
cytoplasmic RNA interacting protein variant protein.
Length = 623
Score = 30.7 bits (66), Expect = 7.7
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +1
Query: 568 QILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAAAKEALQG 744
++LF+ NL + +E +L F+QF + V+ + D AF+ F + A E + G
Sbjct: 338 KVLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNG 393
>AF155568-1|AAD38198.1| 562|Homo sapiens NSAP1 protein protein.
Length = 562
Score = 30.7 bits (66), Expect = 7.7
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +1
Query: 568 QILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAAAKEALQG 744
++LF+ NL + +E +L F+QF + V+ + D AF+ F + A E + G
Sbjct: 338 KVLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNG 393
>AF037448-1|AAC12926.1| 623|Homo sapiens Gry-rbp protein.
Length = 623
Score = 30.7 bits (66), Expect = 7.7
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +1
Query: 568 QILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAAAKEALQG 744
++LF+ NL + +E +L F+QF + V+ + D AF+ F + A E + G
Sbjct: 338 KVLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNG 393
>AB209098-1|BAD92335.1| 534|Homo sapiens synaptotagmin binding,
cytoplasmic RNA interacting protein variant protein.
Length = 534
Score = 30.7 bits (66), Expect = 7.7
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +1
Query: 568 QILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFGNXMQSAAAKEALQG 744
++LF+ NL + +E +L F+QF + V+ + D AF+ F + A E + G
Sbjct: 310 KVLFVRNLANTVTEEILEKAFSQFGKLERVKKL---KDYAFIHFDERDGAVKAMEEMNG 365
>AB208812-1|BAD92049.1| 338|Homo sapiens H2.0-like homeo box 1
variant protein.
Length = 338
Score = 30.7 bits (66), Expect = 7.7
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 7/45 (15%)
Frame = -1
Query: 623 IDNIIS-----EVSSGRFVKNRIWLGGCSALTLFRIPAP--GIPC 510
ID I+S +V G ++ R W GGC LT +P P G+ C
Sbjct: 293 IDRILSAEFDPKVKEGNTLRGRSWAGGCRPLTTDPLPGPRAGLGC 337
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,839,833
Number of Sequences: 237096
Number of extensions: 2269669
Number of successful extensions: 3590
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 3415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3572
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11936890730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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