Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_C01
         (894 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0036 - 25292150-25293124,25294021-25294206,25294704-252948...    63   3e-10
10_08_0957 + 21801347-21801710,21802319-21802649,21803052-218031...    34   0.18 
04_04_1113 - 30986757-30986780,30986781-30987273,30987437-309879...    29   6.6  

>02_05_0036 -
           25292150-25293124,25294021-25294206,25294704-25294874,
           25295135-25295353,25295461-25295712,25295802-25295903,
           25296487-25296684,25296762-25297046,25297640-25297709,
           25297797-25297970,25298825-25298952,25299059-25299163,
           25299686-25300030,25300361-25300563,25300964-25301045,
           25301667-25301744
          Length = 1190

 Score = 62.9 bits (146), Expect = 3e-10
 Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 1/137 (0%)
 Frame = +3

Query: 243 AEKQTAVRTLLKDYFLSLTKHLLAERAQLQALHAANQRTLHTRGELSQERKEQLEQHQTT 422
           A+++   +  L  Y+ ++ + L +E A L+ + A N + L  +GELS E     E+ + +
Sbjct: 245 ADQKKFFKKALNTYYDAVAELLQSEHASLRLMEAENAKVLTAKGELSDENTASYEKLRKS 304

Query: 423 YDKLLVNAQNFAEVLGEDLGEAGEPPTLSLTVIETQGSVTIGGNEDITMQAGTDP-WQDE 599
           +D L     + AE L  D+     P   + T + T   V     ++    +  +P W DE
Sbjct: 305 FDHLQRGVSSLAEAL--DMQPPVMPDDGNTTRVTTGSDVAPSTAKE---PSALEPIWDDE 359

Query: 600 DSRTFYTCLPDLKVFMP 650
           D++ FY  LPDL+ F+P
Sbjct: 360 DTKAFYESLPDLRAFVP 376


>10_08_0957 +
           21801347-21801710,21802319-21802649,21803052-21803112,
           21803266-21803334,21803631-21803846,21804012-21804071
          Length = 366

 Score = 33.9 bits (74), Expect = 0.18
 Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
 Frame = +3

Query: 396 EQLEQHQ-TTYDKLLVNAQNFAEVLGEDLGEAGEPPTLSLTVIETQGSVTIGGNEDITMQ 572
           + +E+ Q TTY  +L + ++     G+ +G  G   T  +T++ T GSV+ GG +     
Sbjct: 292 QAIERGQGTTYGSILTSMRSTIRSTGDSMGSGGGAVTSLITMLLTGGSVSSGGLKQDPQL 351

Query: 573 AGTDPW 590
              +P+
Sbjct: 352 TANEPF 357


>04_04_1113 -
           30986757-30986780,30986781-30987273,30987437-30987959,
           30988361-30988615,30988812-30988926,30989026-30989078,
           30989213-30989265,30989419-30989473,30989549-30989599,
           30989776-30990024,30990122-30990350,30990994-30991305
          Length = 803

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
 Frame = +3

Query: 393 KEQLEQHQTTYDKLLVNA-----QNFAEVL----GEDLGEAGEPPTLSLTVIETQGSV 539
           K++ ++ Q+T+++LL+       Q  A  L    G+D+    EPPT S T++   GS+
Sbjct: 636 KDKNQESQSTFERLLIEGLEKFIQREAVELSLQSGDDIDSDEEPPTPSRTIVAPNGSL 693


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,014,742
Number of Sequences: 37544
Number of extensions: 363689
Number of successful extensions: 1068
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1068
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)